CV884973

Overview
NameCV884973
Unique NameCV884973
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884973 vs. ExPASy Swiss-Prot
Match: SSM1_YEAST (Protein SSM1 OS=Saccharomyces cerevisiae GN=SSM1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.466e-17
Identity = 74/232 (31.90%), Postives = 117/232 (50.43%), Query Frame = -2
Query:  276 FDLDDTLYPSETGIAEAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQR-KI----IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP-RHALFLDDNIKNVTAGKALGLRTV--LVGKTVN-----VGEADYALENVNNLPQVVPEIW 929
            FD+D+ LY S T I + ++++I  F       S   A  L    +K YG  + GL  + + + A +Y+  V   LP  D++KPD  LRN+L  + Q  KI    +FTN+ +NHAI CL+ L IAD FD +             +R D   ++ KP + A + A+  + +    +A F+DD+ KN+  G  LG++T   LV   VN       E    + ++  LP VV +++
Sbjct:   60 FDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGL--------TYCDYSRTD--TLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF 280          
BLAST of CV884973 vs. ExPASy Swiss-Prot
Match: PHM8_YEAST (Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae GN=PHM8 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.621e-16
Identity = 66/217 (30.41%), Postives = 107/217 (49.31%), Query Frame = -2
Query:  306 FDLDDTLYPSETGIAEAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQRKI-------IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP-RHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVN 929
            FD+D+TLY   T +   +++++  F   + GF + +A  L    ++ YG ++ GL           Y+ F+   LP  D +KPD +LR LL ++ ++K+       +FTNS +NHAI C+K L IAD FD I              RP E   + KP     + A   + +    +A F+DDN  NV +  ++G+     G  +++ E DY  E+ N
Sbjct:   57 FDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIKNKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAIRCVKILGIADLFDGI--------TYCHYDRPIEEEFICKPDPKFFETAKLQSGLSSFANAWFIDDNESNVRSALSMGM-----GHVIHLIE-DYQYESEN 259          
BLAST of CV884973 vs. ExPASy Swiss-Prot
Match: YAI5_SCHPO (Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe GN=SPAC24B11.05 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.163e-12
Identity = 59/189 (31.22%), Postives = 86/189 (45.50%), Query Frame = -2
Query:  375 FDLDDTLYPSETGIAEAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYD-LIKPDPQLRNLLCSITQRK--IIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANV-DPRHALFLDDNIKNVTAGKALG 929
            FDLD+ LYP    I   +   I  F  +K G    +A  LR   ++ YG  + GL  L ++I A DY   V   LP + +IK D  LR +L  + ++    IFTN+   HA   LK L I DCFD I   +    +L           + KP  +  +  +  A V D    +F+DD+  N+   +  G
Sbjct:   10 FDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VLHHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYLGIEDCFDGITYCDYNAKDL-----------IAKPMPEMYERVMREAGVTDKDKCIFVDDSYGNILGAREFG 186          
The following BLAST results are available for this feature:
BLAST of CV884973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SSM1_YEAST1.466e-1731.90Protein SSM1 OS=Saccharomyces cerevisiae GN=SSM1 P... [more]
PHM8_YEAST1.621e-1630.41Phosphate metabolism protein 8 OS=Saccharomyces ce... [more]
YAI5_SCHPO3.163e-1231.22Uncharacterized protein C24B11.05 OS=Schizosacchar... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011F11_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884973 ID=CV884973; Name=CV884973; organism=Citrus sinensis; type=EST; length=930bp
TTTTGTGACACGATTGCAATATTATTCAATACACGTAGCAAAGTTACATA
ATTTGAGAGCATATACATTTTATTTTCAAATATGGACAGCACGTTAACAT
TCATGATACATATCAACAGTTGTAGAAACTGATCAACATGATATCTACAC
AGTGGGGCCCTAACCGAAACACGAACGGTTCTGATCTAGGCTCCCACTGG
CGTGGTAGTGAGAATGGATTCCAATTCACTTCTGGTGCGGCTGATCCTTT
GATCGCCATCGTCCGATTGGCTGACCCATATCTCTGGAACCACTTGAGGT
AAGTTATTGACATTCTCTAATGCATAATCCGCTTCACCGACGTTCACCGT
CTTCCCAACCAAAACGGTGCGTAGTCCTAAAGCCTTGCCGGCGGTGACAT
TTTTAATGTTGTCGTCAAGAAACAAGGCGTGACGAGGATCAACATTAGCA
ACATGGAGGGCGAGTTTCATGGCGTCCATTGAAGGCTTCAAAAGGACGGG
GAATTCATCGGGACGAGTTGCTTTCGAGAGATTCGGGTTCATTGTCTCGA
AACAGATTATTTGATCGAAACAATCTGCTATTTCTAGTCGTTTCAGACAT
GTAATTGCATGGTTCCTGTCCGAATTGGTGAAAATAATCTTTCTCTGGGT
GATGCTGCATAAGAGGTTGCGTAGTTGAGGATCTGGTTTGATCAAATCAT
ACGGCAATCTTCCGTGCACGAAACCGTGGTAATCATCGGCACCAATATCA
TAGCCTAGAGCTCGCAAGCCAGCGAGGGTGCTGCCGTAAGCTTTGAAAAG
CTCAACTCTGAGACTTGAAGCTTTGGTTTCTGAGAATCCGCATTTCTCAA
TAAGAAATCCTTCAATATTTCTCTTGACAGCTTCAGCTATTCCAGTTTCT
GAAGGGTACAAAGTGTCATCCAAATCAAAA
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