EY665344
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 1.165e-79 Identity = 154/207 (74.40%), Postives = 170/207 (82.13%), Query Frame = 2 Query: 53 DKPTRPLFNGSSLYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK---NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 DKP + L+NG SLYYMSSLPNEAVY+KEK+GV WPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LC KRALE FRLDP KWGVNVQ LSGSP+NF V + K +M L P GG LS QT+TKK A +IFF+TM Y+++ ++ GYI DQL Sbjct: 15 DKPVKSLYNGGSLYYMSSLPNEAVYDKEKSGVAWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIM----ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD-ESTGYIDYDQL 216
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 1.021e-75 Identity = 151/207 (72.95%), Postives = 166/207 (80.19%), Query Frame = 2 Query: 53 DKPTRPLFNGSSLYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK---NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 DKP + LFNG LY MSSLP+EAVYEKE+ GVTWPKQLNAPLEVVDPEIADIIE EKARQWKGLELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LC KRALE FRLDP KWGVNVQ LSGSP+NF V + K +M L P GG LS QT+TKK A +IFF+TM Y++ ++ GYI DQL Sbjct: 15 DKPLQRLFNGGHLYSMSSLPSEAVYEKERPGVTWPKQLNAPLEVVDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKAHDRIM----ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ESTGYIDYDQL 216
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 8.643e-75 Identity = 148/207 (71.50%), Postives = 167/207 (80.68%), Query Frame = 2 Query: 53 DKPTRPLFNGSSLYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK---NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 +K +RPLF+ SSLYY SSLP+EAVY+KE VTWPKQLN+PLEV+DPEIADIIE EKARQWKGLELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LC KRALE FRLDP KWGVNVQ LSGSPSNF V + K +M L P GG LS QT+TKK A +IFF+TM Y+++ ++ GYI DQL Sbjct: 15 NKSSRPLFSASSLYYKSSLPDEAVYDKENPRVTWPKQLNSPLEVIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIM----ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD-ESTGYIDYDQL 216
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 2.780e-73 Identity = 148/207 (71.50%), Postives = 165/207 (79.71%), Query Frame = 2 Query: 53 DKPTRPLFNGSSLYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK---NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 DKP RPL +S Y MSSLP+EAV EKE++ VTWPKQLNAPLE VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LC KRALE FRLDP KWGVNVQ LSGSP+NF V + K +M L P GG LS QT+TKK A +IFF+TM Y+++ ++ GYI DQ+ Sbjct: 15 DKPIRPLIRSTSCY-MSSLPSEAVDEKERSRVTWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIM----ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD-ESTGYIDYDQM 215
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 3.074e-72 Identity = 147/207 (71.01%), Postives = 163/207 (78.74%), Query Frame = 2 Query: 53 DKPTRPLFNGSSLYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK---NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 +KP + LFNG LY MSSLP+EAVYEKE+ GVTWPKQLNAPLEV DPEIADIIE EKARQWKGLELI SENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LC KRALE FRLD KWGVNVQ LSGSP+NF V + K +M L P GG LS QT+TKK A +IFF+TM Y++ ++ GYI DQL Sbjct: 15 NKPLQRLFNGGHLYSMSSLPSEAVYEKERPGVTWPKQLNAPLEVGDPEIADIIELEKARQWKGLELILSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDAAKWGVNVQPLSGSPANFHVYTALLKAHDRIM----ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ESTGYIDYDQL 216
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 2.149e-41 Identity = 95/164 (57.93%), Postives = 115/164 (70.12%), Query Frame = 2 Query: 176 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCI-GKNLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 +E VDPE+ DI+++EK RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGGNE+ID E LC KRALE F LDP KWGVNVQ LSGSP+NF+V I G N I L P GG L+ T +K A + FF+++ YK++ T G I D+L Sbjct: 52 VEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRI--MGLDLPDGGHLTHGFFTPARKVSATSEFFQSLPYKVD-PTTGLIDYDKL 212
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 168.703 bits (426), Expect = 4.787e-41 Identity = 93/164 (56.71%), Postives = 118/164 (71.95%), Query Frame = 2 Query: 176 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HC-IGKNLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 +E +DPE+ +I+++EK+RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGGNE+ID E LC KRALE F LDP KWGVNVQSLSGSP+NF+V +G N I L P GG L+ T +K A + FF++M YK++ ++ G I D+L Sbjct: 56 VEKIDPEVFNIMKNEKSRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFIDQMEILCQKRALEVFGLDPAKWGVNVQSLSGSPANFAVYTALVGANGRI--MGLDLPDGGHLTHGFFTPARKVSATSEFFQSMPYKVDAQS-GLIDYDKL 216
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.626e-39 Identity = 86/155 (55.48%), Postives = 112/155 (72.26%), Query Frame = 2 Query: 167 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK--NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKI 625 N PL+ VD EI +++ EK RQ+KGLELI SENFTS +VM+A+GS TNKY+EGYPG+RYYGG E +D E+LC KRAL+ FRLD KWGVNVQ SGSP+NF+V + + + ++G L P GG L+ QT+ KK A +IFF++M Y+I Sbjct: 7 NTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSRYYGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMG---LDLPSGGHLTHGYQTDKKKISASSIFFESMPYQI 158
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYD_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=SPAC24C9.12c PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 5.851e-39 Identity = 89/166 (53.61%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 173 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCI--GKNLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 PL+ DP +A+I+ HE RQ + LI SENFTS +VM A+GSVM+NKYSEGYPGARYYGGN++ID E+LC +RAL F LDP KWGVNVQ LSGSP+N V I ++G L P GG LS QT+TKK A + +F++M Y+++ T G I D L Sbjct: 11 PLKEQDPTVAEIMRHEADRQRSSVVLIASENFTSRAVMDALGSVMSNKYSEGYPGARYYGGNKFIDQIETLCQERALAAFNLDPAKWGVNVQCLSGSPANMQVYQAIMPPHGRLMG---LDLPSGGHLSHGYQTDTKKISAVSTYFESMPYRVDPNT-GLIDYDML 172
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.103e-37 Identity = 86/159 (54.09%), Postives = 110/159 (69.18%), Query Frame = 2 Query: 164 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSN---FSV*HCIGKNLMIGSWPLIFPMGGILSPAIQ-TNTKKKPAGAIFFKTMAYKIE 628 L+ ++ DPE+ DI+ E++RQ + + LIPSENFTSV+VM +GS M NKYSEGYPG RYYGGN+YIDMAESLC KRALE + LDP KWGVNVQSLSG+P+N +S +G +M L P GG LS Q N K + +F+TMAY+++ Sbjct: 36 LSQHVQEFDPEMYDILTKERSRQKRSITLIPSENFTSVAVMNLLGSEMQNKYSEGYPGQRYYGGNQYIDMAESLCQKRALELYGLDPAKWGVNVQSLSGAPANLYAYSAIMEVGDRMM----GLDLPHGGHLSHGYQLQNGNKISYISKYFQTMAYRVD 190 The following BLAST results are available for this feature:
BLAST of EY665344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665344 ID=EY665344; Name=EY665344; organism=Citrus sinensis; type=EST; length=1003bpback to top |