EY665342

Overview
NameEY665342
Unique NameEY665342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1018
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665342 vs. ExPASy Swiss-Prot
Match: MENH_SALTY (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella typhimurium GN=menH PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.377e-11
Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 1 
Query:   88 LLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQNHVAKATQEITLSIDVIADVLYKLIEQITPGKVT---LVGYSMGARIALYMALRFSDKIKGTVIISGSPGLRDNIARKIRRAED 453
            L+FLHGF G   EW P+ +   G +R + IDLPGHGGS              + +D  ADV+  L   +    +    LVGYS+G R+A+  A +    + G V+  G PGL++  AR  RR  D
Sbjct:   17 LVFLHGFSGDCHEWQPVGEQFHGCSR-LYIDLPGHGGSA------------AIPVDGFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNEQARAERRLSD 128
[Close]
BLAST of EY665342 vs. ExPASy Swiss-Prot
Match: MENH_SALSV (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella schwarzengrund (strain CVM19633) GN=menH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.929e-11
Identity = 45/125 (36.00%), Postives = 63/125 (50.40%), Query Frame = 1 
Query:   88 LLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQNHVAKATQEITLSIDVIADVLYKLIEQITPGKVT---LVGYSMGARIALYMALRFSDKIKGTVIISGSPGLRDNIARKIRRAED 453
            L+FLHGF G   EW P+ +   G +R + IDLPGHGGS              + +   ADV+  L   +    +    LVGYS+G R+A+  A +    + G V+  G PGL++  AR  RR  D
Sbjct:   17 LVFLHGFSGDCREWQPVGEQFHGCSR-LYIDLPGHGGSA------------AIPVGGFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNEQARAERRLSD 128
[Close]
BLAST of EY665342 vs. ExPASy Swiss-Prot
Match: MENH_SALPK (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella paratyphi A (strain AKU_12601) GN=menH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.929e-11
Identity = 45/125 (36.00%), Postives = 63/125 (50.40%), Query Frame = 1 
Query:   88 LLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQNHVAKATQEITLSIDVIADVLYKLIEQITPGKVT---LVGYSMGARIALYMALRFSDKIKGTVIISGSPGLRDNIARKIRRAED 453
            L+FLHGF G   EW P+ +   G +R + IDLPGHGGS              + +   ADV+  L   +    +    LVGYS+G R+A+  A +    + G V+  G PGL++  AR  RR  D
Sbjct:   17 LVFLHGFSGDCREWQPVGEQFHGCSR-LYIDLPGHGGSA------------AIPVGGFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNERARAERRLSD 128
[Close]
BLAST of EY665342 vs. ExPASy Swiss-Prot
Match: MENH_SALPC (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella paratyphi C (strain RKS4594) GN=menH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.929e-11
Identity = 45/125 (36.00%), Postives = 63/125 (50.40%), Query Frame = 1 
Query:   88 LLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQNHVAKATQEITLSIDVIADVLYKLIEQITPGKVT---LVGYSMGARIALYMALRFSDKIKGTVIISGSPGLRDNIARKIRRAED 453
            L+FLHGF G   EW P+ +   G +R + IDLPGHGGS              + +   ADV+  L   +    +    LVGYS+G R+A+  A +    + G V+  G PGL++  AR  RR  D
Sbjct:   17 LVFLHGFSGDCREWQPVGEQFHGCSR-LYIDLPGHGGSA------------AIPVGRFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNEQARAERRLSD 128
[Close]
BLAST of EY665342 vs. ExPASy Swiss-Prot
Match: MENH_SALPA (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella paratyphi A GN=menH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.929e-11
Identity = 45/125 (36.00%), Postives = 63/125 (50.40%), Query Frame = 1 
Query:   88 LLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQNHVAKATQEITLSIDVIADVLYKLIEQITPGKVT---LVGYSMGARIALYMALRFSDKIKGTVIISGSPGLRDNIARKIRRAED 453
            L+FLHGF G   EW P+ +   G +R + IDLPGHGGS              + +   ADV+  L   +    +    LVGYS+G R+A+  A +    + G V+  G PGL++  AR  RR  D
Sbjct:   17 LVFLHGFSGDCREWQPVGEQFHGCSR-LYIDLPGHGGSA------------AIPVGGFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNERARAERRLSD 128
[Close]
BLAST of EY665342 vs. ExPASy Swiss-Prot
Match: MENH_SALNS (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella newport (strain SL254) GN=menH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.929e-11
Identity = 45/125 (36.00%), Postives = 63/125 (50.40%), Query Frame = 1 
Query:   88 LLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQNHVAKATQEITLSIDVIADVLYKLIEQITPGKVT---LVGYSMGARIALYMALRFSDKIKGTVIISGSPGLRDNIARKIRRAED 453
            L+FLHGF G   EW P+ +   G +R + IDLPGHGGS              + +   ADV+  L   +    +    LVGYS+G R+A+  A +    + G V+  G PGL++  AR  RR  D
Sbjct:   17 LVFLHGFSGDCREWQPVGEQFHGCSR-LYIDLPGHGGSA------------AIPVGGFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNEQARAERRLSD 128
[Close]
BLAST of EY665342 vs. ExPASy Swiss-Prot
Match: MENH_SALHS (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella heidelberg (strain SL476) GN=menH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.929e-11
Identity = 45/125 (36.00%), Postives = 63/125 (50.40%), Query Frame = 1 
Query:   88 LLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQNHVAKATQEITLSIDVIADVLYKLIEQITPGKVT---LVGYSMGARIALYMALRFSDKIKGTVIISGSPGLRDNIARKIRRAED 453
            L+FLHGF G   EW P+ +   G +R + IDLPGHGGS              + +   ADV+  L   +    +    LVGYS+G R+A+  A +    + G V+  G PGL++  AR  RR  D
Sbjct:   17 LVFLHGFSGDCREWQPVGEQFHGCSR-LYIDLPGHGGST------------AIPVGGFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNEQARAERRLSD 128
[Close]
BLAST of EY665342 vs. ExPASy Swiss-Prot
Match: MENH_SALG2 (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=menH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.929e-11
Identity = 45/125 (36.00%), Postives = 63/125 (50.40%), Query Frame = 1 
Query:   88 LLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQNHVAKATQEITLSIDVIADVLYKLIEQITPGKVT---LVGYSMGARIALYMALRFSDKIKGTVIISGSPGLRDNIARKIRRAED 453
            L+FLHGF G   EW P+ +   G +R + IDLPGHGGS              + +   ADV+  L   +    +    LVGYS+G R+A+  A +    + G V+  G PGL++  AR  RR  D
Sbjct:   17 LVFLHGFSGDCREWQPVGEQFHGCSR-LYIDLPGHGGSA------------AIPVGGFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNEQARAERRLSD 128
[Close]
BLAST of EY665342 vs. ExPASy Swiss-Prot
Match: MENH_SALEP (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella enteritidis PT4 (strain P125109) GN=menH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.929e-11
Identity = 45/125 (36.00%), Postives = 63/125 (50.40%), Query Frame = 1 
Query:   88 LLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQNHVAKATQEITLSIDVIADVLYKLIEQITPGKVT---LVGYSMGARIALYMALRFSDKIKGTVIISGSPGLRDNIARKIRRAED 453
            L+FLHGF G   EW P+ +   G +R + IDLPGHGGS              + +   ADV+  L   +    +    LVGYS+G R+A+  A +    + G V+  G PGL++  AR  RR  D
Sbjct:   17 LVFLHGFSGDCREWQPVGEQFHGCSR-LYIDLPGHGGSA------------AIPVGGFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNEQARAERRLSD 128
[Close]
BLAST of EY665342 vs. ExPASy Swiss-Prot
Match: MENH_SALDC (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella dublin (strain CT_02021853) GN=menH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.929e-11
Identity = 45/125 (36.00%), Postives = 63/125 (50.40%), Query Frame = 1 
Query:   88 LLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQNHVAKATQEITLSIDVIADVLYKLIEQITPGKVT---LVGYSMGARIALYMALRFSDKIKGTVIISGSPGLRDNIARKIRRAED 453
            L+FLHGF G   EW P+ +   G +R + IDLPGHGGS              + +   ADV+  L   +    +    LVGYS+G R+A+  A +    + G V+  G PGL++  AR  RR  D
Sbjct:   17 LVFLHGFSGDCREWQPVGEQFHGCSR-LYIDLPGHGGSA------------AIPVGGFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNEQARAERRLSD 128
The following BLAST results are available for this feature:
BLAST of EY665342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MENH_SALTY1.377e-1136.802-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl... [more]
MENH_SALSV8.929e-1136.002-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl... [more]
MENH_SALPK8.929e-1136.002-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl... [more]
MENH_SALPC8.929e-1136.002-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl... [more]
MENH_SALPA8.929e-1136.002-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl... [more]
MENH_SALNS8.929e-1136.002-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl... [more]
MENH_SALHS8.929e-1136.002-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl... [more]
MENH_SALG28.929e-1136.002-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl... [more]
MENH_SALEP8.929e-1136.002-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl... [more]
MENH_SALDC8.929e-1136.002-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665342 ID=EY665342; Name=EY665342; organism=Citrus sinensis; type=EST; length=1018bp
TACCAATTGAATGTGAATTCAAAGGATTTCTGCAGTTTCATCAAAGTGCA
AGAGATTGGACAAAGAATTGATATACAGGATAACATACTTCTGTTTCTCC
ATGGCTTTCTTGGAACTGGTGAAGAATGGATTCCTATTATGAAGGCCGTC
TCAGGATCAGCAAGATGCATCTCAATTGATCTCCCTGGTCATGGGGGATC
AAAGATGCAAAATCATGTTGCTAAAGCCACACAGGAAATAACTTTGTCAA
TAGACGTCATTGCGGACGTACTATATAAGCTGATTGAACAGATTACTCCT
GGAAAAGTTACTCTAGTTGGGTATTCTATGGGAGCAAGAATTGCCTTGTA
TATGGCCCTGAGATTCAGTGATAAGATCAAAGGAACCGTTATAATATCTG
GAAGTCCAGGGCTACGAGATAATATAGCAAGAAAAATTCGTAGGGCTGAA
GATGATTCTAAAGCGTGCTCCCTTGTCACTCATGGCCTGCAAGTCTTTTC
CAAATACTTGGTATACTGGGGAACTCCTGGGAAAAGCTTGAAAAACCTTC
CCCTTTTTAACCCAAAAAATTGCCAGCCCCCTTTGGTTCATAAAAAAGGG
CAAAAATTCTTTTCAAAAACCTCTGCCAAAATTTAAGGGTTTGGGAAAAA
CCCCCCCCTTTGGGGAAAAAATTTGAACCCTTTTGCCACCACCCCCCCCC
TTTTGAATTTTTGTCGGAAAAAAAAAAAAAAAAAAAAATTCTAGATCCAT
TTTGCTAAAAAAAATGGGTTTTAAAACTTTCCCCCGGGGAAAAAAAGGGG
AGGGGTATTTTCTGGGGGGAAAAGGGAAATTTTTAGAAAAGGGTGTTAAA
ACCCCCCCCCTTTTGGGGGGCCCTCGGTGGTTCCCCCTCTTGGGGAAAAA
AACCCCCTCCGCCCCGTTGTTTTTCACGCCGGGGTGGGGTGGGGGGAAAA
AAAATTTTTTTCTCGGCAAACCCAACAAAAAAAAAAATAAAAACCCAAAA
AAAAATAATCCTCTCACT
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