CV884908

Overview
NameCV884908
Unique NameCV884908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13353 contig Csv1_Contig13353:245..830. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 7.121e-89
Identity = 157/178 (88.20%), Postives = 165/178 (92.70%), Query Frame = 2
Query:   53 FCVFAASRCRRQGKDPSSSDAQSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGA 586
            FCVF A R R++G    +SDA SGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAAT NFDE+ +LGVGGFGKVYRGEIDG TTKVAIKRGNP+SEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMA+GT+REHLYKTQ P LPWKQRLEICIGA
Sbjct:  465 FCVFGAYRRRKRGDYQPASDATSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNPSLPWKQRLEICIGA 642          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.556e-54
Identity = 105/182 (57.69%), Postives = 135/182 (74.18%), Query Frame = 2
Query:   53 FCVFAASRCRRQGKDPSSSDAQSGWLPLSLYGNSHSAGSAKT----NTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGA 586
            FC    +  +R+ K   S    S WLP+  YGNSH++ +  T    +  GS+ S+L + LCR FS +EIK  T+NFDE+ ++GVGGFGKVY+G IDG T KVAIK+ NP SEQG++EF+TEIE+LS+LRH+HLVSLIGYC+E  EM L+YDYM+ GTLREHLY T++P L WK+RLEI IGA
Sbjct:  448 FCALCFTMYQRKRKFSGSDSHTSSWLPI--YGNSHTSATKSTISGKSNNGSHLSNLAAGLCRRFSLSEIKHGTHNFDESNVIGVGGFGKVYKGVIDGGT-KVAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIGA 626          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 4.821e-53
Identity = 105/173 (60.69%), Postives = 132/173 (76.30%), Query Frame = 2
Query:   80 RRQGKDPSSSDAQSGWLPLSLYGNSHSAGSAKT----NTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGA 586
            ++QG     S   S WLP+  YGNS ++G+  T    +  GS+ S+L + LCR FS  EIK  T NFD++ ++GVGGFGKVY+G IDG TTKVA+K+ NP SEQG++EF+TEIE+LS+LRH+HLVSLIGYC+E  EM LVYDYMA+GTLREHLY T+KP L WK+RLEI IGA
Sbjct:  454 KKQGYQGGDSHTSS-WLPI--YGNSTTSGTKSTISGKSNNGSHLSNLAAGLCRRFSLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDG-TTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGA 622          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.925e-50
Identity = 105/181 (58.01%), Postives = 126/181 (69.61%), Query Frame = 2
Query:   53 FCVFAASRCRRQGKDPSSSDAQSGWLPLSLYGNSHS---AGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGA 586
            +C   ASR +++   P        WLPL LYG S +   + ++  + T S  S   ++L R F F EI  ATN FDE+ LLGVGGFG+VY+G ++  T KVA+KRGNP SEQG+ EF+TEIEMLSKLRHRHLVSLIGYC+E  EMILVY+YMA G LR HLY    PPL WKQRLEICIGA
Sbjct:  437 YCCLVASR-KQRSTSPQEGGNGHPWLPLPLYGLSQTLTKSTASHKSATASCISLASTHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGT-KVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGA 615          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.953e-47
Identity = 96/168 (57.14%), Postives = 119/168 (70.83%), Query Frame = 2
Query:   92 KDPSSSDAQSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY---KTQKPPLPWKQRLEICIGA 586
            K  S     S W PL         G+  TNT    A SLP++LCR FS  EIK+ATN+F++ L++GVGGFG VY+G+IDG  T VA+KR    S QG  EF+TE+EMLSKLRH HLVSLIGYC+E+ EM+LVY+YM +GTL++HL+   KT  PPL WK+RLEICIGA
Sbjct:  469 KKKSKPSTNSSWCPLP-------HGTDSTNTKP--AKSLPADLCRRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGA 627          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.163e-47
Identity = 99/178 (55.62%), Postives = 123/178 (69.10%), Query Frame = 2
Query:   80 RRQGKDPSSSDA------QSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK---PPLPWKQRLEICIGA 586
            R++  + SS D        S W PL      H  GS  T +    ASSLPS+LCR FS  EIK+ATN+F+E L++GVGGFG VY+G IDG  T VA+KR    S QG  EF TE+EMLSKLRH HLVSLIGYC+++ EM+LVY+YM +GTL++HL++  K   PPL WK+RLEICIGA
Sbjct:  466 RKKKSNESSVDTTNKPSTNSSWGPLL-----HGTGSTNTKS----ASSLPSDLCRRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGA 634          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.743e-47
Identity = 93/169 (55.03%), Postives = 121/169 (71.60%), Query Frame = 2
Query:   80 RRQGKDPSSSDAQSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGA 586
            +R+ K   S +   GW PL L+ N+ +A +  T  +    +   S + R F+ AEI+AAT NFD+ L +GVGGFGKVYRGE++  T  +AIKR  P S+QG+ EF+TEI MLS+LRHRHLVSLIG+C+E+ EMILVY+YMA GTLR HL+ +  PPL WKQRLE CIG+
Sbjct:  458 KRRSKSDESKNNPPGWRPLFLHVNNSTANAKATGGSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTL-IAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLPPLSWKQRLEACIGS 625          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.562e-46
Identity = 97/175 (55.43%), Postives = 125/175 (71.43%), Query Frame = 2
Query:   62 FAASRCRRQGKDPSSSDAQSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGA 586
            F   + R++G+D  S      W+P S+ G S   GS  +N  G+  +S+ +N      FA +K ATNNFDE+  +GVGGFGKVY+GE++  T KVA+KRGNP S+QG+ EF+TEIEMLS+ RHRHLVSLIGYC+EN EMIL+Y+YM  GT++ HLY +  P L WKQRLEICIGA
Sbjct:  425 FVLYKKRKRGQDGHSKT----WMPFSINGTS--MGSKYSN--GTTLTSITTNANYRIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGT-KVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLPSLTWKQRLEICIGA 590          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.132e-44
Identity = 102/193 (52.85%), Postives = 129/193 (66.84%), Query Frame = 2
Query:   74 RCRRQGKDPSSSDAQSGWLPLSLYGNSHSA----------------GSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK------PPLPWKQRLEICIGA 586
            R +R+ KD    ++ S WL L L+  SHS+                GS K+ + G  +      L R+F F E++ AT NFDE  + GVGGFGKVY GEIDG T +VAIKRG+  SEQG++EFQTEI+MLSKLRHRHLVSLIG+C+EN EMILVY+YM+ G LR+HLY +++      P L WKQRLEICIG+
Sbjct:  447 RWQRRPKDWQKQNSFSSWL-LPLHA-SHSSYISSKGGSTSRRMSIFGSKKSKSNGFSSFFSNQGLGRYFPFTELQTATQNFDENAVCGVGGFGKVYIGEIDGGT-QVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGS 636          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.343e-44
Identity = 95/172 (55.23%), Postives = 122/172 (70.93%), Query Frame = 2
Query:   80 RRQGKDPSSSDAQSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSN---LCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGA 586
            +++ +D    ++ S WL     G+S    +  T+ TGS+ S+L ++   L R+FS +E++  T NFD + ++GVGGFG VY G ID  T +VAIKRGNP SEQG+ EF TEI+MLSKLRHRHLVSLIGYC+EN EMILVY+YM+ G  R+HLY     PL WKQRLEICIGA
Sbjct:  464 KKRPQDWQKRNSFSSWLLPIHAGDS----TFMTSKTGSHKSNLYNSALGLGRYFSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGT-QVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGKNLSPLTWKQRLEICIGA 630          
The following BLAST results are available for this feature:
BLAST of CV884908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
FERON_ARATH7.121e-8988.20Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
ANX2_ARATH2.556e-5457.69Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
ANX1_ARATH4.821e-5360.69Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
THE1_ARATH2.925e-5058.01Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
Y5900_ARATH3.953e-4757.14Putative receptor-like protein kinase At5g39000 OS... [more]
Y5389_ARATH5.163e-4755.62Probable receptor-like protein kinase At5g38990 OS... [more]
Y1357_ARATH6.743e-4755.03Probable receptor-like protein kinase At1g30570 OS... [more]
HERK_ARATH2.562e-4655.43Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y5613_ARATH3.132e-4452.85Probable receptor-like protein kinase At5g61350 OS... [more]
Y2214_ARATH5.343e-4455.23Probable receptor-like protein kinase At2g21480 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884908 ID=CV884908; Name=CV884908; organism=Citrus sinensis; type=EST; length=586bp
CATAATTGGTGGGGGTGTTGGTGGAGGAATTGCTCTAGCCCTTGTCGTTG
GCTTTTGTGTTTTTGCTGCATCTCGTTGCCGCAGACAAGGGAAGGATCCG
AGCTCAAGTGATGCGCAATCTGGTTGGCTTCCTCTTTCACTCTATGGAAA
TTCACACTCTGCTGGATCAGCCAAGACAAACACTACAGGAAGTTATGCAT
CTTCCCTTCCTTCAAATCTTTGCCGCCACTTCTCATTTGCTGAGATAAAA
GCTGCCACTAACAACTTTGATGAAGCTCTACTTCTTGGGGTTGGAGGCTT
TGGCAAAGTGTACCGTGGAGAAATCGATGGTGCAACAACTAAAGTTGCTA
TCAAGCGTGGGAACCCACTCTCTGAGCAAGGTGTGCATGAGTTCCAGACT
GAGATTGAAATGCTCTCAAAACTTCGACACCGACACCTTGTTTCATTGAT
TGGTTACTGTGAAGAGAACTGTGAAATGATACTTGTATATGATTACATGG
CTTATGGAACACTGAGGGAGCATCTTTACAAAACTCAAAAGCCCCCTCTG
CCATGGAAGCAAAGGCTTGAGATATGTATTGGGGCT
back to top