CV884901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884901 vs. ExPASy Swiss-Prot
Match: GOT1B_MOUSE (Vesicle transport protein GOT1B OS=Mus musculus GN=Golt1b PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = -3 Query: 172 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 471 DK LLA+GN+LF+AG++ IGL+ T +FF +R K T GWP++GMI E YGF +LF GF+P + F++R+P+LG L P +RSF D+ Sbjct: 31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQRHKVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130
BLAST of CV884901 vs. ExPASy Swiss-Prot
Match: GOT1B_HUMAN (Vesicle transport protein GOT1B OS=Homo sapiens GN=GOLT1B PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = -3 Query: 172 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 471 DK LLA+GN+LF+AG++ IGL+ T +FF ++ K T GWP++GMI E YGF +LF GF+P + F++R+P+LG L P +RSF D+ Sbjct: 31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130
BLAST of CV884901 vs. ExPASy Swiss-Prot
Match: GOT1B_BOVIN (Vesicle transport protein GOT1B OS=Bos taurus GN=GOLT1B PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = -3 Query: 172 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 471 DK LLA+GN+LF+AG++ IGL+ T +FF ++ K T GWP++GMI E YGF +LF GF+P + F++R+P+LG L P +RSF D+ Sbjct: 31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130
BLAST of CV884901 vs. ExPASy Swiss-Prot
Match: GOT1A_BOVIN (Vesicle transport protein GOT1A OS=Bos taurus GN=GOLT1A PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16 Identity = 45/94 (47.87%), Postives = 54/94 (57.45%), Query Frame = -3 Query: 199 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXGWPILGMILETYGFIVLFSGFWPTLSVFL---QRIPILGWLFQQ 471 D LLA GN+LF+ G+SL IGL+ T FF +R +KGT WP+LGM LETYGF LF GF+P FL IP L LFQ+ Sbjct: 31 DSVLLAFGNLLFLTGLSLIIGLRRTFSFFFQRHKFKGTSFFLGGVVIVLLRWPLLGMCLETYGFFSLFRGFFPVAFGFLGSASNIPFLSALFQR 124
BLAST of CV884901 vs. ExPASy Swiss-Prot
Match: GOT1A_MOUSE (Vesicle transport protein GOT1A OS=Mus musculus GN=Golt1a PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16 Identity = 45/94 (47.87%), Postives = 55/94 (58.51%), Query Frame = -3 Query: 199 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXGWPILGMILETYGFIVLFSGFWPTLSVFLQ---RIPILGWLFQQ 471 D LLA GN+LF+ G+SL IGL+ T FF +R KGT WP+LGM+LE YGFI LF GF+P + FL IP L LFQ+ Sbjct: 31 DSVLLAFGNLLFLTGLSLIIGLRRTFAFFFQRHKLKGTSFFLGGVAIVLLRWPLLGMLLEAYGFISLFKGFFPVVFGFLGSAFNIPFLSTLFQK 124
BLAST of CV884901 vs. ExPASy Swiss-Prot
Match: GOT1A_HUMAN (Vesicle transport protein GOT1A OS=Homo sapiens GN=GOLT1A PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16 Identity = 45/94 (47.87%), Postives = 54/94 (57.45%), Query Frame = -3 Query: 199 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXGWPILGMILETYGFIVLFSGFWPTLSVFLQ---RIPILGWLFQQ 471 D LLA GN+LF+ G+SL IGL+ T FF +R KGT WP+LGM LETYGF LF GF+P FL IP LG LF++ Sbjct: 31 DSVLLAFGNLLFLTGLSLIIGLRKTFWFFFQRHKLKGTSFLLGGVVIVLLRWPLLGMFLETYGFFSLFKGFFPVAFGFLGNVCNIPFLGALFRR 124
BLAST of CV884901 vs. ExPASy Swiss-Prot
Match: GOT1_CAEEL (Probable Golgi transport protein 1 OS=Caenorhabditis elegans GN=F41C3.4 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = -3 Query: 172 MVSFEMNDRKKXXXXXXXXXXXXXXXXXXXXFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 567 M++FE++ K+ D LLA+GN+LFI G++ IG++ T+ FF + + KG+I G+P+ GMI E +GFIVLF GF P + L+ IP + + P +R DR Sbjct: 1 MMNFEVSTTKQIGVGLTTFGFFFIFLGVLMFLDSALLAIGNLLFIVGITFIIGVQRTLVFFFEFRKLKGSILFFGGILVVLFGYPLFGMIAECWGFIVLFGGFLPGIVNLLRSIPGISTITYLPGIRQVLDR 132
BLAST of CV884901 vs. ExPASy Swiss-Prot
Match: GOT1_DICDI (Protein transport protein got1 homolog OS=Dictyostelium discoideum GN=golt1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12 Identity = 33/101 (32.67%), Postives = 58/101 (57.43%), Query Frame = -3 Query: 172 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTI-SXXXXXXXXXXGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 471 D+ LLA+GN+L ++G+ L +GL+ T +FF +++ KGTI W +GM++E +GF+ LF +P + L+++PI+G + P V + Sbjct: 29 DRNLLALGNLLLVSGIVLILGLQKTTKFFAQKKKIKGTILFFFGIVVLLVTRWTFVGMVIEIFGFVNLFGDAFPIVISILRKLPIIGNILNHPLVNRLLQK 129
BLAST of CV884901 vs. ExPASy Swiss-Prot
Match: GOT1_YEAST (Protein transport protein GOT1 OS=Saccharomyces cerevisiae GN=GOT1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12 Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = -3 Query: 154 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDRYRSRRV 471 D+ LLA+GNILF+ GV L IG + T FF + +G++ W LG I+E+ G I LF F+ + FL+ +PI+G + P + D+ RV Sbjct: 30 DRALLALGNILFLIGVFLIIGSQKTYIFFTRPNKRRGSLFFLVGAFLILLKWTFLGFIIESLGIIGLFGDFFGVIVQFLRSMPIIGPILSHPAIAPIVDKLAGVRV 135 The following BLAST results are available for this feature:
BLAST of CV884901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884901 ID=CV884901; Name=CV884901; organism=Citrus sinensis; type=EST; length=701bpback to top |