CV884875

Overview
NameCV884875
Unique NameCV884875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.434e-19
Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = -1
Query:  758 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 919
            EAISELDTLGEESYKDS+LIMQLLRDNLTLWTSD  ++ GDEIKEAA+KRESGE
Sbjct:  206 EAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEEGGDEIKEAAAKRESGE 259          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.226e-18
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = -1
Query:  749 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQQ 919
            EAISELDTLGEESYKDS+LIMQLLRDNLTLWTSD  DD GD+IKE ASK ESGE QQ
Sbjct:  205 EAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNADDVGDDIKE-ASKPESGEGQQ 260          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.477e-18
Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = -1
Query:  758 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 919
            EAISELD+LGEESYKDS+LIMQLLRDNLTLWTSD  DD GDEIKEAA+ +E G+
Sbjct:  211 EAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDANDDGGDEIKEAAAPKEPGD 264          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433A_SOYBN (14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.443e-17
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = -1
Query:  758 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 919
            EAISELDTLGEESYKDS+LIMQLLRDNLTLWTSDITD AGDEIKE  SK++ GE
Sbjct:  205 EAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDIAGDEIKE-TSKQQPGE 257          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.443e-17
Identity = 46/57 (80.70%), Postives = 52/57 (91.23%), Query Frame = -1
Query:  749 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQQ 919
            +AI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD TDDA DEI+E  SK+ESG+ QQ
Sbjct:  204 DAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTTDDAEDEIRE-GSKQESGDGQQ 259          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.461e-17
Identity = 44/56 (78.57%), Postives = 50/56 (89.29%), Query Frame = -1
Query:  752 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQ 919
            EAI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD+ DDA DEIKEAA+ + + E Q
Sbjct:  204 EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDAADEIKEAAAPKPTEEQQ 259          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.483e-17
Identity = 45/56 (80.36%), Postives = 51/56 (91.07%), Query Frame = -1
Query:  752 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQ 919
            EAISELDTLGEESYKDS+LIMQLLRDNLTLWTSD+T+D GDE+KE ASK ++ E Q
Sbjct:  202 EAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTEDGGDEVKE-ASKGDACEGQ 256          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.352e-17
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = -1
Query:  758 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 919
            EAI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD+ DD  DEIKEAA K ++ E
Sbjct:  205 EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKEAAPKPDNNE 258          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = -1
Query:  767 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRE 919
            EAISELDTLGEESYKDS+LIMQLLRDNLTLWTSDI ++AGDEIKEA+   E
Sbjct:  207 EAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDINEEAGDEIKEASKAVE 257          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16
Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = -1
Query:  758 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 919
            +AI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD+TD+AGDEIKE ASK +  E
Sbjct:  203 DAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIKE-ASKPDGAE 255          
The following BLAST results are available for this feature:
BLAST of CV884875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
1433_MESCR3.434e-1987.0414-3-3-like protein OS=Mesembryanthemum crystallin... [more]
14334_SOLLC2.226e-1885.9614-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
14334_ORYSJ6.477e-1881.4814-3-3-like protein GF14-D OS=Oryza sativa subsp. ... [more]
1433A_SOYBN1.443e-1787.0414-3-3-like protein A OS=Glycine max GN=GF14A PE=2... [more]
14331_SOLTU1.443e-1780.7014-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
14332_ARATH2.461e-1778.5714-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]
14333_ORYSJ5.483e-1780.3614-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
14335_SOLTU9.352e-1779.6314-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]
1433_LILLO1.221e-1684.3114-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
14333_ARATH1.221e-1681.4814-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884875 ID=CV884875; Name=CV884875; organism=Citrus sinensis; type=EST; length=919bp
AGCCAAAATATGTTAATAATACAATTAATAATACTGTATAACAATACATA
TGAAAATTTAATTTCATCAAACATTAGAAAAGTAGTACTCACTCACAAAC
AAAATTATTTTATATATAAATCAAACAAAATCATTTCTCCAACCATGACC
ACCAAGACGCAGCCTCCAATCTTCACCGGCACTGGAATCCGGGCTAACCC
CGGCTGCAACCCGTTTAACCCGGCTGCCATTATTAAACGCTGGGCTAGGG
CTCCTCGGAGCCTGGTACGTCGTCGTTGCACCGCCAGAACTAGAAGAATC
ACAGCCGCCTGCAGCTGACCCAAGTACTGAATCTTTCTTTGTTGAAGAGT
TCCAATGCGGTGTAGCATTTGGACTCCTCTGCTGCTGCTTGATATTCATC
ATGCCTTGGCTTCTCACCTTGGCCTTGGCAGACTGTGTTGGCGCCATGTA
GCTTGGGACATTGTGTGAGAATGATGGCTTGTGTTGGGGAGGTATGTATG
AGCTTGAGTCTGATAATTCTCTATTGAACCTTCCCATTTTTGAAACCCAA
ACCAAATACTTCTCATCAATAATTAAATCTAGTTTACAATCTGTTGGAAC
ACATAAACCCTAAGTGCAGCCAACACTCAAGATTATCAGTTCATGAGAAT
ATCCTGCTAAAACAACCCACATGGCATCCATGTAAAATAAAAGCCACAAG
ATAAAAAATACAGATACATATCCTATGAACTGAACTCATTATTCATCACT
GCTGCGTCTCCCCTGATTCACGTTTTGATGCTGCTTCCTTAATCTCATCT
CCAGCATCATCAGTGATATCAGAAGTCCAAAGTGTCAGATTATCTCGGAG
AAGCTGCATAATCAATGAACTGTCCTTGTATGATTCTTCACCCAAGGTAT
CGAGCTCAGAAATGGCCTC
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