EY665331

Overview
NameEY665331
Unique NameEY665331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1012
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665331_ssr142 microsatellite EY665331_ssr142:142..153. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665331 vs. ExPASy Swiss-Prot
Match: DNJ10_ARATH (Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.368e-19
Identity = 55/98 (56.12%), Postives = 67/98 (68.37%), Query Frame = 3
Query:  246 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLK*SRET*SI*QAWKGREYLRDSMVDAAAGILG*FFGKRVF 539
            MVK+T YYDVLGV+  A+ +EIKKAYY+KAR VHPDKNP DP+AA NFQVLGEAYQVL  S +  +     K      D+++D AA I    FG  +F
Sbjct:    1 MVKETEYYDVLGVSPTATESEIKKAYYIKARQVHPDKNPNDPQAAHNFQVLGEAYQVLSDSGQRQAYDACGKS-GISTDAIIDPAA-IFAMLFGSELF 96          
BLAST of EY665331 vs. ExPASy Swiss-Prot
Match: CAJ1_YEAST (Protein CAJ1 OS=Saccharomyces cerevisiae GN=CAJ1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.993e-14
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 3
Query:  246 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVL 419
            MVK+T YYD+LG+  +A+P EIKKAY  KA   HPDK+P DP A   FQ +GEAYQVL
Sbjct:    1 MVKETEYYDILGIKPEATPTEIKKAYRRKAMETHPDKHPDDPDAQAKFQAVGEAYQVL 58          

HSP 2 Score: 20.4014 bits (41), Expect = 4.993e-14
Identity = 8/14 (57.14%), Postives = 9/14 (64.29%), Query Frame = 1
Query:  421 SDPEKREAYDKHGK 462
            SDP  R  YD+ GK
Sbjct:   59 SDPGLRSKYDQFGK 72          
BLAST of EY665331 vs. ExPASy Swiss-Prot
Match: DNAJ_SALRD (Chaperone protein dnaJ OS=Salinibacter ruber (strain DSM 13855) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.870e-13
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 3
Query:  264 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVL 419
            YYD+LGV+ DAS  EIKKAY  KA   HPD+NP DP+A + F+   EAY+VL
Sbjct:    5 YYDILGVDEDASDKEIKKAYRKKAMEYHPDRNPDDPEAEQKFKEASEAYEVL 56          

HSP 2 Score: 28.4906 bits (62), Expect = 8.870e-13
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  421 SDPEKREAYDKHGKGGNTSG 480
            SDPEKR+ YD+ G  G  SG
Sbjct:   57 SDPEKRQRYDQFGHDGVDSG 76          
BLAST of EY665331 vs. ExPASy Swiss-Prot
Match: DJP1_YEAST (DnaJ-like protein 1 OS=Saccharomyces cerevisiae GN=DJP1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.619e-12
Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 3
Query:  246 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVL 419
            MV DT YYD+LGV+  AS  EIKKAY  K+   HPDKNP DP A + FQ + EAYQVL
Sbjct:    1 MVVDTEYYDLLGVSTTASSIEIKKAYRKKSIQEHPDKNPNDPTATERFQAISEAYQVL 58          
BLAST of EY665331 vs. ExPASy Swiss-Prot
Match: DNAJ_HALHL (Chaperone protein dnaJ OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 4.457e-11
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 3
Query:  264 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVL 419
            YY+VLGVN +AS AEIKKAY   A+  HPD+NPGD ++A+ F+ + EAY+VL
Sbjct:    6 YYEVLGVNKNASDAEIKKAYRRMAQKFHPDRNPGDEESAERFKEVKEAYEVL 57          

HSP 2 Score: 23.0978 bits (48), Expect = 4.457e-11
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 1
Query:  421 SDPEKREAYDKHGKGG 468
            SD +KR AYD+ G  G
Sbjct:   58 SDAQKRAAYDQFGHAG 73          
The following BLAST results are available for this feature:
BLAST of EY665331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
DNJ10_ARATH1.368e-1956.12Chaperone protein dnaJ 10 OS=Arabidopsis thaliana ... [more]
CAJ1_YEAST4.993e-1462.07Protein CAJ1 OS=Saccharomyces cerevisiae GN=CAJ1 P... [more]
DNAJ_SALRD8.870e-1359.62Chaperone protein dnaJ OS=Salinibacter ruber (stra... [more]
DJP1_YEAST1.619e-1262.07DnaJ-like protein 1 OS=Saccharomyces cerevisiae GN... [more]
DNAJ_HALHL4.457e-1159.62Chaperone protein dnaJ OS=Halorhodospira halophila... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665331 ID=EY665331; Name=EY665331; organism=Citrus sinensis; type=EST; length=1012bp
CCCGCGTCCGGAAATCTGAAAATTGACTCCTTATCATTAATATTAATTAT
TATTCCTACTAATATTATCTAGTCGGTGAATCTATTTCTGGGTTTGTTTA
TTTGATCCTTTCTTCTTTGTATCAACAAGCCAGCATCTAAAAAGCAAGCA
AGCACAGACCACAATCTCGATCACCTTTGGCTAAAAGCTGCTTAGCTTAA
AATCCCATTCTTTTTGGTCGTAAAAGCTCTGGTGAAAAGAAAGCAATGGT
GAAAGACACGGCGTATTATGATGTCTTGGGTGTCAATGTTGATGCATCAC
CGGCTGAGATCAAGAAGGCTTATTACCTCAAGGCGAGGATAGTCCACCCA
GATAAAAATCCCGGAGACCCGAAAGCTGCCAAAAATTTTCAGGTACTTGG
TGAGGCTTATCAGGTTCTAAAGTGATCCCGAGAAACGTGAAGCATATGAC
AAGCATGGAAAGGGAGGGAATACCTCAGGGATTCCATGGTTGACGCTGCG
GCTGGTATTTTGGGATGATTTTTTGGGAAACGAGTATTTTGAAAAATATA
TTGGGCAACTTTGCCCTTGGGCTACCCTTGGCATCCGTTGAAATTTGAAG
AAAAAAAGCAAAAAATTGAAGTTTTATAAACCTAAAAAAACGGAAAAAAA
ATGAAGGGGAAAGGGCAAAAAGGGGAAAAGGGAAAAAAAAAACTCAAAAC
CCCTTTTTGGAAAAAAACATTTCCCCAAAACCATTTTTGTTTGGTGGGCC
AAAAGGAAAAAAATTTTTGAAAAAGGGGGAAAAATGAAAAAACCCCAGGG
CCCCCCTCCAAGGGGAAGTGTTTTTTTGGGGAAAAAACATAGCGCTAAAA
ACCATTTGGGGTTTTATTTTTTACCAACAGGGGGAAGAGGCCGGAAAAAA
AAAAAATTTGGGGAAAAGGGGAAAAAAAACAAATATTTTTATAAAAGGGG
GTCCCCCATATTTTTTTTTGAAAGAAAAAAGGGGGGGGGGGGGGGGGCGA
AGAGAAAAAAAA
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