EY679005

Overview
NameEY679005
Unique NameEY679005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679005 vs. ExPASy Swiss-Prot
Match: Y1491_ARATH (DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.664e-18
Identity = 57/140 (40.71%), Postives = 76/140 (54.29%), Query Frame = 1 
Query:   37 DLWLPLANQGWR-SCAQSAYNPSLPHKSQGNNQVFLDGGLNQQRMGICDAVAVTKILNATLVIPYLEVNPVWQDSCSFMDIYDVYHFINVLKDDISIVKELPN-EFSWSTREYYCPAIRATRI*TAPIPASANWYLENVL 450
            +LW    + GWR S A  +  P    ++ G  +V  +GGLNQQR  IC+AV   +I+NATLV+P L+ N  W D   F  IYDV HFI  LK D+ IV ++P+   +  T++     IR  R   API     WYL   L
Sbjct:   61 ELWESAKSGGWRPSSAPRSDWPPPTKETNGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPDVHKNGKTKKIKAFQIRPPR--DAPI----EWYLTTAL 194
The following BLAST results are available for this feature:
BLAST of EY679005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1491_ARATH4.664e-1840.71DUF246 domain-containing protein At1g04910 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-053-H10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679005 ID=EY679005; Name=EY679005; organism=Citrus sinensis; type=EST; length=879bp
GCTTTAAGCGCCCCAAGTGCATATGCCAAGCAGTCTGATCTCTGGCTACC
TTTGGCCAACCAAGGATGGAGATCATGTGCTCAATCTGCATATAATCCTT
CATTACCTCATAAATCTCAAGGAAACAATCAAGTATTTCTTGATGGAGGG
TTAAACCAGCAGAGAATGGGGATATGTGATGCAGTTGCTGTTACAAAAAT
TCTGAATGCAACACTTGTGATCCCATATCTTGAAGTAAATCCTGTTTGGC
AGGATTCATGTTCCTTCATGGATATATATGATGTCTATCACTTTATTAAT
GTATTAAAAGATGATATTTCTATTGTCAAAGAACTTCCTAATGAGTTTTC
TTGGAGCACAAGGGAGTATTATTGCCCTGCTATTCGTGCCACCAGAATCT
AGACTGCACCAATTCCTGCTTCAGCTAACTGGTATCTAGAGAATGTACTT
GCCTGTACTCCTAAGTAATGGGGTTGCTGCAATTTCCCCATTCTCTCCCC
GTCCGACGTTTGACAACTTGCCCGAAGGGACATTCTACGATAACGTTGGA
CACCAAATCTTTCAAGTCTTTGATTTTTTTTATCTTCTAACATAAACATT
TGGATATGCCCTTTGTATTTCGCTTTTTGGAATCCTTTCATTAAAATAAT
ATAGAATTATTATGATGTTCTTCATGGATGAAACCTCTTATAATAAATTT
CATTACTTAAACCCAATTAAATTTTTCATTGTTATCACTTTCTCGATTTA
GATTGGTCTATAGGGACTTCTTTCGCTTATATAATATTTAGTTGGTGGGG
TATAGGCTAAAAAAATTAAACATCTTGCCTAATAAACTTCGCACTTTATT
TTTATTTAAGTGATAATGGTATTTGAATT
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