EY665328

Overview
NameEY665328
Unique NameEY665328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1277
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.025e-41
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 268
            +H+PVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN EKAWDDQWIFWVGPF+GA  AA YHQYILRA+AIKALGSFRSNA
Sbjct:  191 SHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRASAIKALGSFRSNA 278          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.480e-40
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSN 265
            +HVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN EKAWDD WIFWVGPF+GA  AA YHQYILRAAAIKAL SFRSN
Sbjct:  189 SHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALASFRSN 275          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 1.932e-40
Identity = 77/88 (87.50%), Postives = 82/88 (93.18%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 268
            +HVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAVIYNK+K WDD WIFWVGP +GA +AAFYHQYILRA AIKALGSFRSNA
Sbjct:  203 SHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKALGSFRSNA 290          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.524e-40
Identity = 76/87 (87.36%), Postives = 82/87 (94.25%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSN 265
            +HVP+LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNK++ WDD WIFWVGPF+GA  AA YHQY+LRAAAIKALGSFRSN
Sbjct:  193 SHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYVLRAAAIKALGSFRSN 279          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 3.296e-40
Identity = 76/88 (86.36%), Postives = 82/88 (93.18%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 268
            +HVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAV+YNK+K WDD WIFWVGP +GA +AAFYHQYILRA AIKALGSFRSNA
Sbjct:  205 SHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRAGAIKALGSFRSNA 292          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 4.305e-40
Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 268
            +HVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSFG AVI+N +KAWDDQWI+WVGPF+GA VAA YHQYILR +AIKALGSFRSNA
Sbjct:  200 SHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYILRGSAIKALGSFRSNA 287          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 5.623e-40
Identity = 79/86 (91.86%), Postives = 81/86 (94.19%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 262
            +HVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN EKAWDDQWIFWVGP IGA  AAFYHQ+ILRAAAIKALGSF S
Sbjct:  198 SHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKALGSFGS 283          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 7.343e-40
Identity = 78/87 (89.66%), Postives = 81/87 (93.10%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSN 265
            +HVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN++KAWDD WIFW GPFIGA  AA YHQYILRAAAIKALGSFRSN
Sbjct:  193 SHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKALGSFRSN 279          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 9.591e-40
Identity = 77/88 (87.50%), Postives = 82/88 (93.18%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 268
            +HVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVI+N EKAW + WIFWVGPF+GA +AAFYHQYILRA AIKALGSFRSNA
Sbjct:  203 SHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALGSFRSNA 290          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 6.216e-39
Identity = 75/88 (85.23%), Postives = 81/88 (92.05%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 268
            +HVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNK K WDD WIFWVGPFIGA +AAFYHQ++LRA+  K+LGSFRS A
Sbjct:  196 SHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLGSFRSAA 283          
The following BLAST results are available for this feature:
BLAST of EY665328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
PIP27_ARATH1.025e-4190.91Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP28_ARATH1.480e-4090.80Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP21_MAIZE1.932e-4087.50Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP1_ATRCA2.524e-4087.36Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP22_MAIZE3.296e-4086.36Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP27_MAIZE4.305e-4086.36Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP24_ARATH5.623e-4091.86Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP26_ORYSJ7.343e-4089.66Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP21_ORYSJ9.591e-4087.50Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP22_ARATH6.216e-3985.23Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665328 ID=EY665328; Name=EY665328; organism=Citrus sinensis; type=EST; length=1277bp
GACTACCCATGTTCCGGTCTTGGCACCACTCCCCATTGGGTTTGCTGTGT
TCATGGTTCACTTGGCCACCATCCCCATCACCGGAACCGGCATCAACCCA
GCTAGGAGTTTTGGAGCTGCTGTGATCTACAACAAGGAGAAAGCCTGGGA
TGACCAATGGATCTTCTGGGTTGGACCATTCATTGGAGCTTTCGTTGCTG
CATTCTACCACCAATACATTCTCAGGGCAGCAGCCATTAAGGCTCTTGGA
TCCTTCAGGAGCAATGCTTAAGCTTTAAATATGATGTCTGGTGCTTCCAA
GGTGAAAAATTTACAGCATGATCAGGAGTGCAAGTCTGTTACGAAGGCCC
TTTAAGAAATCTCTTTTCAAGCTCTTTAGAGGGTCATTGAATTTGAGCTG
AATTAGAAGGCTATTGAATTGTAGATATTTGAACATTATGCTTTTATGCC
TATGCTTTATCTATGTGTAAAGGTGGATTTTGGTATCCAATTTTAATTTT
TTCTTTGGGTGTGTTTAAAATGGGGGGGGGTTTTTTATAATCCTATTTCT
CAAATTTTTCTTAAAAATAAAATAAGGGGGGCCGCCAGGAAGAACCAAGT
TAATTACCCGTCATGGAACGCTATATTCTTCTAAGGGCCCCTAATTCATA
TCATGGGCCGCTTTTAAACTCAAGGACGGGGAAACACGCGGTCACCAACT
TACGCGCTTGACCCCACCCCCTTTCACCCTCGGGGAATAAAAAAAACCCC
CCTAACCCCTCCCAAGTGATGCCCCGGAGTGGAAGGAGATCGCCAGAGCC
ACTAACCCGGGGGGGGAGGGTAAATACAATCACATACTCAACCCACGGCG
CTTCTTCTGCATCACCTTTCCAATCAGCGACGATTCATAGGCAAANTATG
ATATGATGATAATACATTGACACTAACGACATATTTTAGTATTTTATTAC
CTAACATGCTTATTGACTGAATAACATGCCTAGTTTCCAATCCACCAATA
ACGACGTAACTGTTCCCCTAGAATTTCGTTCTGTCGTGAATGATATACAT
AGGCATGTTGACATTCTATAGATTGCGTTATCTTTTAAATTTAATACTAG
AATGATACAAGTTATATAGCGCAGATATATTCATCAATCTACTATCCAGC
AGCACACAGCAACATAGCACACCCGAGCACAATACAAGTGATGTACGACA
ATACAGCTCCCACCAGCACAATCAATTGCTACGTAACACAAAAAATTTAA
CACTTTAAATTACATTACTTTACTCAT
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