EY665324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 9.843e-71 Identity = 147/214 (68.69%), Postives = 158/214 (73.83%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE*GEELDPGYWWWK----PWPKTLWNPKEAPPKF 667 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAP + + +G N+ DD V+LVDTFPGQS DFFGALRA++Y + + W + K L N KE PP F Sbjct: 176 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNV-ADDDIVKLVDTFPGQSIDFFGALRARVYHD-----EVRKWVSEVGVDTIGKKLVNSKEGPPSF 383
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 265.388 bits (677), Expect = 3.740e-70 Identity = 144/212 (67.92%), Postives = 161/212 (75.94%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE*GEE--LDPGYWWWKPWPKTLWNPKEAPPKF 667 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAP + + +G N+ D+ V++VD+FPGQS DFFGALRA++YD+ + D G + K L N +E PP+F Sbjct: 167 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNV-PDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGV---ENIGKRLVNSREGPPEF 374
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 8.333e-70 Identity = 144/210 (68.57%), Postives = 158/210 (75.24%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE*GEELDPGYWWWKPWPKTLWNPKEAPPKF 667 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAP + + G + +D V+LVDTFPGQS DFFGALRA++YD+ + G + + L N KE+PP F Sbjct: 173 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFED-IVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGV-GVERIGRNLVNSKESPPTF 380
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 2.424e-69 Identity = 145/214 (67.76%), Postives = 158/214 (73.83%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE*GEELDPGYWWWK----PWPKTLWNPKEAPPKF 667 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAP + + +G N+ +D V++VD FPGQS DFFGALRA++YD+ + W + K L N KE PP F Sbjct: 176 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEED-IVKVVDQFPGQSIDFFGALRARVYDD-----EVRKWVSEVGVDTIGKKLVNSKEGPPTF 383
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 3.501e-68 Identity = 144/210 (68.57%), Postives = 155/210 (73.81%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE*GEELDPGYWWWKPWPKTLWNPKEAPPKF 667 ELVFAKM I+PIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAP + + G N+ +D V+LVDTFPGQS DFFGALRA++YD+ + G K L N KE PP F Sbjct: 176 ELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKED-IVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGV-GVDSIGKKLVNSKEGPPTF 383
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 3.501e-68 Identity = 133/181 (73.48%), Postives = 146/181 (80.66%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE 580 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNK ENPRVPI+VTGNDFSTLYAP + + +G N+ D+ V++VDTFPGQS DFFGALRA++YD+ Sbjct: 166 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNV-SDESVVKIVDTFPGQSIDFFGALRARVYDD 345
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 258.455 bits (659), Expect = 4.572e-68 Identity = 142/216 (65.74%), Postives = 159/216 (73.61%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYL--PGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE*GEELDPGYWWWKPW----PKTLWNPKEAPPKF 667 ELVFAKMGI PIMMSAGELESGNAGEPAKLIRQRYREA+D+I+KGKM CL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAP + + +G G++ ++H VQLVDTFPGQS DFFGALRA++YD+ + W + + L N KE PP F Sbjct: 172 ELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVD---EEHVVQLVDTFPGQSIDFFGALRARVYDD-----EVRRWVSETGVENIARKLVNSKEGPPTF 379
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 1.330e-67 Identity = 144/210 (68.57%), Postives = 156/210 (74.29%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE*GEELDPGYWWWKPWPKTLWNPKEAPPKF 667 ELVFAKMGINPIMMSAGELESGN GEPAKLIRQRYREAADII KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNKEENPRVPIIVTGNDFSTLYAP + + +G N+ D+ V+LVDTFPGQS DFFGALRA++YD+ + G + K L N +E PP F Sbjct: 164 ELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNV-PDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKW-VGEIGVENISKRLVNSREGPPTF 370
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 5.055e-67 Identity = 141/210 (67.14%), Postives = 153/210 (72.86%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE*GEELDPGYWWWKPWPKTLWNPKEAPPKF 667 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPIIVTGNDFSTLYAP + + +G + +D +LVDTFPGQS DFFGALRA++YD+ + G K L N KE PP F Sbjct: 178 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEED-ITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGV-GVDATGKKLVNSKEGPPTF 385
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 6.602e-67 Identity = 143/218 (65.60%), Postives = 155/218 (71.10%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQ-----GYLPGM---NMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE*GEELDPGYWWWKPWPKTLWNPKEAPPKF 667 ELV AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPII TGNDFSTLYAP ++ YW G G+ + D+ V LVD FPGQS DFFGALRA++YD+ + K K L N +E PP F Sbjct: 176 ELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAP---------LIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEK-IGKRLVNSREGPPVF 383 The following BLAST results are available for this feature:
BLAST of EY665324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665324 ID=EY665324; Name=EY665324; organism=Citrus sinensis; type=EST; length=1002bpback to top |