CV884773
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884773 vs. ExPASy Swiss-Prot
Match: SPL1_ARATH (Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 1.209e-47 Identity = 96/181 (53.04%), Postives = 121/181 (66.85%), Query Frame = 1 Query: 25 PNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRNMRSSLVYRPVMLSMXXXXXXXXXXXLLFKSSPEVLYIFRPFRWELL 567 P+ GPAGLTPLH+AA +D +E+VLDALT+DP VGIEAWK+ +DSTG TP DYA LR H SYIHL+QRKINKKS+ V+++IP S D + K+ P G +S + ++ Q C+LC+ K+ Y R S+ YRP MLSM LLFKS PEVLY+F+PFRWELL Sbjct: 707 PDAAGPAGLTPLHIAAGKDGSEDVLDALTEDPAMVGIEAWKTCRDSTGFTPEDYARLRGHFSYIHLIQRKINKKSTTEDHVVVNIPVSFSDREQKE-PKSGPMASAL----------EITQIPCKLCDHKLVYGTTRRSVAYRPAMLSMVAIAAVCVCVALLFKSCPEVLYVFQPFRWELL 876
BLAST of CV884773 vs. ExPASy Swiss-Prot
Match: SPL12_ARATH (Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.883e-41 Identity = 91/183 (49.73%), Postives = 119/183 (65.03%), Query Frame = 1 Query: 25 PNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQCRLCEQK-VAYRNMRSSLVYRPVMLSMXXXXXXXXXXXLLFKSSPEVLYIFRPFRWELLK 570 P+ GP GLTPLH+AA +D +E+VLDALT+DPG GI+AWK+++D+TG TP DYA LR H SYIHLVQRK+++K V+++IP S + + KQ+ SS SL+ +I QC+LC+ K V S+ YRP MLSM LLFKS PEVLY+F+PFRWELL+ Sbjct: 751 PDAAGPGGLTPLHIAAGKDGSEDVLDALTEDPGMTGIQAWKNSRDNTGFTPEDYARLRGHFSYIHLVQRKLSRKPIAKEHVVVNIPESF-NIEHKQEKRSPMDSS---SLEITQI------NQCKLCDHKRVFVTTHHKSVAYRPAMLSMVAIAAVCVCVALLFKSCPEVLYVFQPFRWELLE 923
BLAST of CV884773 vs. ExPASy Swiss-Prot
Match: SPL1_ORYSJ (Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.095e-27 Identity = 71/186 (38.17%), Postives = 105/186 (56.45%), Query Frame = 1 Query: 25 PNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEK---ITTKVMQQQCRLCEQKVAYR-NMRSSLVYRPVMLSMXXXXXXXXXXXLLFKSSPEVLYIFRPFRWELLK 570 P++ GP+ +TPLH+AA D VLDALTDDP +GI+AWK+A+D+TGLTP DYA R H SYI +VQ KI+ + ++ V + I + D +K +K++ + EK I+TK CR C ++AYR ++ L RP +LS+ L+ + P + + PFRW L+ Sbjct: 675 PDIAGPSDITPLHIAATYSDTAGVLDALTDDPQQLGIKAWKNARDATGLTPEDYARKRGHESYIEMVQNKIDSRLPKA-HVSVTISSTTSTTDFTEKHASQSKTTDQTAFDVEKGQQISTK-PPLSCRQCLPELAYRHHLNRFLSTRPAVLSLVAIAAVCVCVGLIMQGPPHIGGMRGPFRWNSLR 858
BLAST of CV884773 vs. ExPASy Swiss-Prot
Match: SPL6_ORYSJ (Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.837e-26 Identity = 71/184 (38.59%), Postives = 102/184 (55.43%), Query Frame = 1 Query: 25 PNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQCRLC-EQKVAYRNMRS-SLVYRPVMLSMXXXXXXXXXXXLLFKSSPEVLYIFRPFRWELLK 570 P+ GP+ TPLH+AA DDAE+VLDALT+DPG VGI W++A+D G TP DYA R + +Y+++V++KINK + G V+L +P SI + +SL+ +T C C Q + Y N + + +YRP ML++ LL + P+V Y FRWELL+ Sbjct: 791 PDAQGPSKFTPLHIAAATDDAEDVLDALTNDPGLVGINTWRNARDGAGFTPEDYARQRGNDAYLNMVEKKINKHLGK-GHVVLGVPSSI------HPVITDGVKPGEVSLEI-GMTVPPPAPSCNACSRQALMYPNSTARTFLYRPAMLTVMGIAVICVCVGLLLHTCPKV-YAAPTFRWELLE 965
BLAST of CV884773 vs. ExPASy Swiss-Prot
Match: SPL14_ARATH (Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 1.179e-18 Identity = 46/107 (42.99%), Postives = 73/107 (68.22%), Query Frame = 1 Query: 25 PNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWD--SKQKPLKGNKSS 339 PN+ GP G+TPLH+AAC +++++D LT+DP +G+ +W + +D+TG TP YA++R +H+Y LV RK+ K ++ +V L+I +VD SK+ L+ NKSS Sbjct: 863 PNITGPGGITPLHLAACTSGSDDMIDLLTNDPQEIGLSSWNTLRDATGQTPYSYAAIRNNHNYNSLVARKLADKRNK--QVSLNIEHEVVDQTGLSKRLSLEMNKSS 967
BLAST of CV884773 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSJ (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.441e-16 Identity = 54/150 (36.00%), Postives = 83/150 (55.33%), Query Frame = 1 Query: 25 PNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRNMRS-SLVYRPVMLSM 471 PNV GP GLTPLH+AA +DA +++DALTDDP +G+ W SA D G +P YA LR +++Y LV +K+ + ++ +V + + + D + NKS+ + +LQ QC + + + R M S L+ RP + SM Sbjct: 964 PNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAYNELVAQKLVDR--KNNQVTIMVGKEEIHMDQSGNVGEKNKSA-IQALQIRSC------NQCAILDAGLLRRPMHSRGLLARPYIHSM 1104
BLAST of CV884773 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSI (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.441e-16 Identity = 54/150 (36.00%), Postives = 83/150 (55.33%), Query Frame = 1 Query: 25 PNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRNMRS-SLVYRPVMLSM 471 PNV GP GLTPLH+AA +DA +++DALTDDP +G+ W SA D G +P YA LR +++Y LV +K+ + ++ +V + + + D + NKS+ + +LQ QC + + + R M S L+ RP + SM Sbjct: 964 PNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAYNELVAQKLVDR--KNNQVTIMVGKEEIHMDQSGNVGEKNKSA-IQALQIRSC------NQCAILDAGLLRRPMHSRGLLARPYIHSM 1104
BLAST of CV884773 vs. ExPASy Swiss-Prot
Match: SPL16_ARATH (Squamosa promoter-binding-like protein 16 OS=Arabidopsis thaliana GN=SPL16 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.907e-15 Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 25 PNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSI 291 P++ GP +TPLH+AA +++++DALT+DP +G+ W + D+TG TP YA++R +HSY LV RK+ K +G++ L+I I Sbjct: 820 PSIAGPGDITPLHLAASTSSSDDMIDALTNDPQEIGLSCWNTLVDATGQTPFSYAAMRDNHSYNTLVARKLADK--RNGQISLNIENGI 906 The following BLAST results are available for this feature:
BLAST of CV884773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884773 ID=CV884773; Name=CV884773; organism=Citrus sinensis; type=EST; length=860bpback to top |