CV884762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884762 vs. ExPASy Swiss-Prot
Match: RH51_ARATH (DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis thaliana GN=RH51 PE=2 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 8.275e-106 Identity = 194/259 (74.90%), Postives = 229/259 (88.42%), Query Frame = 2 Query: 2 DSLGLSQHTFRAIQDMGFQFMTQIQARAVPPLMVGKDVLGAARTGSGKTLAFLIPAVELLYNAQFAPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTVGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRILEANFEEEMRQIMKLLPKKDRQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVK 778 DSL LS+ T AI++MGFQ+MTQIQA ++ PL+ GKDVLGAARTGSGKTLAFLIPAVELL+ +F+PRNGTGVIVICPTRELAIQT VA++LLK+HSQTV +VIGG+ RR EA+RI G NL++ATPGRLLDHLQNTK FIYK+LKCLVIDEADRILE NFEE+M +I+K+LP K RQTALFSATQT KV+DLAR+S T+PV++DVDDGR KVTNEGL+QGYCVVPS +R ILL SFLK+NL+KK+MVFFS+C SV+ Sbjct: 92 DSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILP-KTRQTALFSATQTSKVKDLARVSL-TSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFLKKNLNKKIMVFFSTCKSVQ 348
BLAST of CV884762 vs. ExPASy Swiss-Prot
Match: RH27_ORYSJ (DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica GN=Os03g0802700 PE=3 SV=1) HSP 1 Score: 371.703 bits (953), Expect = 2.492e-102 Identity = 180/263 (68.44%), Postives = 227/263 (86.31%), Query Frame = 2 Query: 8 LGLSQHTFRAIQDMGFQFMTQIQARAVPPLMVGKDVLGAARTGSGKTLAFLIPAVELLYNAQFAPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTVGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRILEANFEEEMRQIMKLLPKKDRQTALFSATQTKKVEDLARLSFQ------TTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVK 778 LG+S+ T RAI++M + ++TQIQAR++P L+ GKDV+GAA+TGSGKTLAFLIPA+E+L++A F PRNGTGV+V+CPTRELAIQTH VAK+L+KYHSQT+G +IGG+ RRGEA+++ KGVNLLVATPGRLLDHLQNTKGFIY+ LKCL+IDEADR+LE NFEE+M+QI K LP +RQT LFSATQT++V++ A+LSF+ + PVY+ VDD T T EGLQQGYCV+ SA+RF++LY+FLK+ +KKVMVFFSSCNSVK Sbjct: 101 LGVSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEMLHHAHFMPRNGTGVVVVCPTRELAIQTHNVAKELMKYHSQTLGYIIGGNGRRGEADQLAKGVNLLVATPGRLLDHLQNTKGFIYRRLKCLIIDEADRLLEQNFEEDMKQIFKRLP-LNRQTVLFSATQTEQVKEFAKLSFEKNEESTSKPVYVGVDDAETNATVEGLQQGYCVIDSARRFLVLYAFLKKKQNKKVMVFFSSCNSVK 362
BLAST of CV884762 vs. ExPASy Swiss-Prot
Match: RH27_ARATH (DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana GN=RH27 PE=2 SV=2) HSP 1 Score: 371.703 bits (953), Expect = 2.492e-102 Identity = 189/260 (72.69%), Postives = 226/260 (86.92%), Query Frame = 2 Query: 2 DSLGLSQHTFRAIQDMGFQFMTQIQARAVPPLMVGKDVLGAARTGSGKTLAFLIPAVELLYNAQFAPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTVGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRILEANFEEEMRQIMKLLPKKDRQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKR-NLSKKVMVFFSSCNSVK 778 +SL LS +T+++I++MGF MTQIQA+A+PPLM+G+DVLGAARTGSGKTLAFLIPAVELLY +F PRNGTGV+VICPTRELAIQ++ VAK+LLKYHSQTVG VIGG R+ EAE + KGVNLLVATPGRLLDHL+NT GFI+KNLK LV+DEADRILE NFEE++++I+ LLP K RQT+LFSATQ+ KVEDLAR+S T+PVYIDVD+GR +VTNEGL+QGYCVVPSA R + L +FLKR KK+MVFFS+C S K Sbjct: 157 ESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLP-KTRQTSLFSATQSAKVEDLARVSL-TSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRFQGKKKIMVFFSTCKSTK 414
BLAST of CV884762 vs. ExPASy Swiss-Prot
Match: HAS1_SCHPO (ATP-dependent RNA helicase has1 OS=Schizosaccharomyces pombe GN=has1 PE=1 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 1.974e-99 Identity = 178/257 (69.26%), Postives = 219/257 (85.21%), Query Frame = 2 Query: 8 LGLSQHTFRAIQDMGFQFMTQIQARAVPPLMVGKDVLGAARTGSGKTLAFLIPAVELLYNAQFAPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTVGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRILEANFEEEMRQIMKLLPKKDRQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVK 778 L LS++ +AI++MGF+ MT+IQ R++PPL+ G+DVLGAA+TGSGKTLAFLIP +E+LY +F PRNGTGVI+I PTRELA+Q VAK+LLKYH QT G+VIGG+ RR EA+++VKGVNLLVATPGRLLDHLQNTKGF+++NL+ LVIDEADRILE FE+EMRQIMK+LP ++RQT LFSATQT KVEDLAR+S + P+Y++VD G+ T EGL+QGY VV S KRF+LL+SFLKRNL KKV+VF SSC SVK Sbjct: 94 LQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRRAEADKLVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQTLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGLEQGYVVVDSDKRFLLLFSFLKRNLKKKVIVFMSSCASVK 350
BLAST of CV884762 vs. ExPASy Swiss-Prot
Match: HAS1_ASPFU (ATP-dependent RNA helicase has1 OS=Aspergillus fumigatus GN=has1 PE=3 SV=2) HSP 1 Score: 359.377 bits (921), Expect = 1.280e-98 Identity = 175/257 (68.09%), Postives = 217/257 (84.44%), Query Frame = 2 Query: 8 LGLSQHTFRAIQDMGFQFMTQIQARAVPPLMVGKDVLGAARTGSGKTLAFLIPAVELLYNAQFAPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTVGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRILEANFEEEMRQIMKLLPKKDRQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVK 778 LGLS+ T +AI DMGF+ MT+IQ R +PPL+ G+DVLGAA+TGSGKTL+FLIPAVE+L +F PRNGTGVIV+ PTRELA+Q VA++L +YHSQT G+VIGG+ RR EAE+++KGVNLL+ATPGRLLDHLQNT+GF++KNLK LVIDEADRILE FE+EMRQI+K+LP ++RQT LFSATQT KVEDLAR+S + P+YI+VD + T EGL+QGY + + KRF+LL+SFLKRNL KK++VFFSSCN VK Sbjct: 145 LGLSEKTLKAINDMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELCQYHSQTYGIVIGGANRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSEERQTMLFSATQTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKIIVFFSSCNCVK 401
BLAST of CV884762 vs. ExPASy Swiss-Prot
Match: HAS1_COCIM (ATP-dependent RNA helicase HAS1 OS=Coccidioides immitis GN=HAS1 PE=3 SV=1) HSP 1 Score: 358.992 bits (920), Expect = 1.671e-98 Identity = 176/257 (68.48%), Postives = 215/257 (83.66%), Query Frame = 2 Query: 8 LGLSQHTFRAIQDMGFQFMTQIQARAVPPLMVGKDVLGAARTGSGKTLAFLIPAVELLYNAQFAPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTVGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRILEANFEEEMRQIMKLLPKKDRQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVK 778 L LS+ T +AIQ+MGF+ MT+IQ R +PPLM G+DVLGAA+TGSGKTL+FLIPAVE+L +F PRNGTGVIV+ PTRELA+Q VA++L+ +HSQT G+VIGG+ RR EAE++ KGVNLL+ATPGRLLDHLQNT GF++KNLK LVIDEADRILE FE+EMRQI+K+LP +DRQT LFSATQT KVEDLAR+S + P+YI+VD + T EGL+QGY + S KRF+LL+SFLKRNL KK++VFFSSCN VK Sbjct: 129 LNLSEKTLKAIQEMGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTDGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSEDRQTMLFSATQTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICDSDKRFLLLFSFLKRNLKKKIIVFFSSCNCVK 385
BLAST of CV884762 vs. ExPASy Swiss-Prot
Match: HAS1_NEOFI (ATP-dependent RNA helicase has1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=has1 PE=3 SV=1) HSP 1 Score: 357.836 bits (917), Expect = 3.723e-98 Identity = 175/257 (68.09%), Postives = 216/257 (84.05%), Query Frame = 2 Query: 8 LGLSQHTFRAIQDMGFQFMTQIQARAVPPLMVGKDVLGAARTGSGKTLAFLIPAVELLYNAQFAPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTVGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRILEANFEEEMRQIMKLLPKKDRQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVK 778 LGL++ T +AI DMGF MT+IQ R +PPL+ G+DVLGAA+TGSGKTL+FLIPAVE+L +F PRNGTGVIV+ PTRELA+Q VA++L +YHSQT G+VIGG+ RR EAE+++KGVNLL+ATPGRLLDHLQNT+GFI+KNLK LVIDEADRILE FE+EMRQI+K+LP ++RQT LFSATQT KVEDLAR+S + P+YI+VD + T EGL+QGY + + KRF+LL+SFLKRNL KK++VFFSSCN VK Sbjct: 145 LGLTEKTLKAINDMGFDTMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELCQYHSQTYGIVIGGANRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFIFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSEERQTMLFSATQTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKIIVFFSSCNCVK 401
BLAST of CV884762 vs. ExPASy Swiss-Prot
Match: HAS1_EMENI (ATP-dependent RNA helicase has1 OS=Emericella nidulans GN=has1 PE=3 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 2.413e-97 Identity = 174/257 (67.70%), Postives = 214/257 (83.27%), Query Frame = 2 Query: 8 LGLSQHTFRAIQDMGFQFMTQIQARAVPPLMVGKDVLGAARTGSGKTLAFLIPAVELLYNAQFAPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTVGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRILEANFEEEMRQIMKLLPKKDRQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVK 778 LGLS+ T + I++MGF+ MT+IQ R +PPL+ G+DVLGAA+TGSGKTLAFLIPA+E+L +F PRNGTGVIV+ PTRELA+Q VA++LL HSQT G+VIGG+ RR EAE++ KGVNLL+ATPGRLLDHLQNT GF++KNLK LVIDEADRILE FE+EMRQI+K+LP +DRQT LFSATQT KVEDLAR+S + P+YI+VD + T EGL+QGY + + KRF+LL+SFLKRNL KK++VFFSSCN VK Sbjct: 133 LGLSEKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELLTAHSQTYGIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIIKILPNEDRQTMLFSATQTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKIIVFFSSCNCVK 389
BLAST of CV884762 vs. ExPASy Swiss-Prot
Match: HAS1_ASPCL (ATP-dependent RNA helicase has1 OS=Aspergillus clavatus GN=has1 PE=3 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 2.413e-97 Identity = 172/257 (66.93%), Postives = 217/257 (84.44%), Query Frame = 2 Query: 8 LGLSQHTFRAIQDMGFQFMTQIQARAVPPLMVGKDVLGAARTGSGKTLAFLIPAVELLYNAQFAPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTVGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRILEANFEEEMRQIMKLLPKKDRQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVK 778 LGLS+ T +AI +MGF+ MT+IQ R +PPL+ G+DVLGAA+TGSGKTL+FLIPAVE+L +F PRNGTGV+V+ PTRELA+Q VA++L ++HSQT G+VIGG+ RR EAE+++KGVNLL+ATPGRLLDHLQNT+GF++KNLK LVIDEADRILE FE+EMRQI+K+LP ++RQT LFSATQT KVEDLAR+S + P+YI+VD + T EGL+QGY + + KRF+LL+SFLKRNL KK++VFFSSCN VK Sbjct: 148 LGLSEKTLKAINEMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNGTGVLVVSPTRELALQIFGVARELCQHHSQTYGIVIGGANRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSEERQTMLFSATQTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKIIVFFSSCNCVK 404
BLAST of CV884762 vs. ExPASy Swiss-Prot
Match: RH51_ORYSJ (Putative DEAD-box ATP-dependent RNA helicase 51 OS=Oryza sativa subsp. japonica GN=Os06g0535100 PE=3 SV=2) HSP 1 Score: 354.755 bits (909), Expect = 3.152e-97 Identity = 177/265 (66.79%), Postives = 220/265 (83.02%), Query Frame = 2 Query: 8 LGLSQHTFRAIQDMGFQFMTQIQARAVPPLMVGKDVLGAARTGSGKTLAFLIPAVELLYNAQFAPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTVGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRILEANFEEEMRQIMKLLPKKDRQTALFSATQTKKVEDLARLSF------QTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSK--KVMVFFSSCNSVK 778 L +S T AI+DM + +T+IQAR++PPLM+G DV+ +A+TGSGKTLAFLIPA+ELL +F+PRNGTGVIV+CPTRELAIQTH VAK+L++YHSQT+G VIGG RGEAE++ KG+N+LVATPGRLLDH+Q TK F Y+ LKCL+IDEADRILE NFEE+M+QI KLLP++ RQT LFSATQT+KVED A+L+F Q T VY+ VDD +K T EGL+QGYCV+PS +RF++LY+FLK+ LS+ KVMVFFSSCNSVK Sbjct: 91 LPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRNGTGVIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAEQLAKGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGRQTVLFSATQTEKVEDFAKLTFGSKEERQRTLVYVGVDDHESKATVEGLKQGYCVIPSERRFLVLYAFLKKALSEKTKVMVFFSSCNSVK 355 The following BLAST results are available for this feature:
BLAST of CV884762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884762 ID=CV884762; Name=CV884762; organism=Citrus sinensis; type=EST; length=778bpback to top |