CV884751

Overview
NameCV884751
Unique NameCV884751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9133 contig Csv1_Contig9133:17..873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884751 vs. ExPASy Swiss-Prot
Match: PPT1_CAEEL (Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.248e-27
Identity = 61/154 (39.61%), Postives = 89/154 (57.79%), Query Frame = -3
Query:  397 PLC-GSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGHLKISKADMKKHII 855
            P C G  I C     LI    Y  +VQ  +  + Y   PN + +Y ++  FL  +NNE  +  N TYK     L+NLVL+ F  D +++PK+++WFG+Y DG    +LP  +T LY ED IGLK L ++GR+HF+ V G HL+I ++ +   II
Sbjct:  142 PYCIGDNIMCNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNE--NNNNPTYKRNLLSLKNLVLVKFNQDHMVVPKDSSWFGFYKDGDIDTILPMNETDLYKEDRIGLKKLHESGRIHFMDVDGDHLQIPRSVLVNDII 293          
BLAST of CV884751 vs. ExPASy Swiss-Prot
Match: PPT3_DICDI (Palmitoyl-protein thioesterase 3 OS=Dictyostelium discoideum GN=ppt3 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.523e-21
Identity = 51/120 (42.50%), Postives = 75/120 (62.50%), Query Frame = -3
Query:  436 YSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGH 795
            Y   +Q  L+ + Y K P+ I KYLE+  FL  +NNE   K N+TYKE  + L  +VL    +DK +IPKE+ WF +Y DG+ + V+P Q+   Y+EDW+GL+TLD++ R+ F +    H
Sbjct:  148 YEKTIQKKLSVAEYWKDPHRIDKYLERSIFLADINNEYQVK-NTTYKENLTKLNAMVLTYSTNDKTIIPKESGWFSFYADGSGTEVVPLQQQTQYSEDWLGLRTLDESNRLFFYTTTCTH 266          
BLAST of CV884751 vs. ExPASy Swiss-Prot
Match: PPT1_RAT (Palmitoyl-protein thioesterase 1 OS=Rattus norvegicus GN=Ppt1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.303e-21
Identity = 56/153 (36.60%), Postives = 80/153 (52.29%), Query Frame = -3
Query:  385 SGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGHLKISKADMKKHIIPYLK 843
            S   C      + A  YS  VQ+ L  + Y   P     Y     FL  +N E     N +YKE    L+  V++ F +D ++ P ++ WFG+Y  G     +P Q+T LYTED +GLK +D AG++ F++  G HL+ISK     HIIP+LK
Sbjct:  156 SSHICDFIRKSLNAGAYSKVVQERLVQAQYWHDPIKEEVYRNCSIFLADINQER--HINESYKENLMALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQETTLYTEDRLGLKKMDKAGKLVFLAKEGDHLQISKEWFTAHIIPFLK 306          
BLAST of CV884751 vs. ExPASy Swiss-Prot
Match: PPT1_MOUSE (Palmitoyl-protein thioesterase 1 OS=Mus musculus GN=Ppt1 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.758e-20
Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = -3
Query:  385 SGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGHLKISKADMKKHIIPYLK 843
            S   C      + A  YS  VQ+ L  + Y   P     Y     FL  +N E     N +YK+    L+  V++ F +D ++ P ++ WFG+Y  G     +P Q++ LYTED +GLK +D AG++ F++  G HL+ISK     HIIP+LK
Sbjct:  156 SSHICDFIRKSLNAGAYSKLVQERLVQAQYWHDPIKESVYRNYSIFLADINQERCV--NESYKKNLMALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQESTLYTEDRLGLKKMDKAGKLVFLAKEGDHLQISKEWFTAHIIPFLK 306          
BLAST of CV884751 vs. ExPASy Swiss-Prot
Match: PPT1_MACFA (Palmitoyl-protein thioesterase 1 OS=Macaca fascicularis GN=PPT1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.060e-19
Identity = 51/152 (33.55%), Postives = 80/152 (52.63%), Query Frame = -3
Query:  388 SGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGHLKISKADMKKHIIPYL 843
            S   C      + A  YS  VQ+ L  + Y   P     Y     FL  +N E     N +YK+    L+  V++ F +D ++ P ++ WFG+Y  G     +P Q+T LYT+D +GLK +D+AG++ F++  G HL++S+     HIIP+L
Sbjct:  156 SSHICDFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQERGI--NESYKKNLMALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEMDNAGQLVFLATEGDHLQLSEEWFYAHIIPFL 305          
BLAST of CV884751 vs. ExPASy Swiss-Prot
Match: PPT1_HUMAN (Palmitoyl-protein thioesterase 1 OS=Homo sapiens GN=PPT1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.060e-19
Identity = 51/152 (33.55%), Postives = 80/152 (52.63%), Query Frame = -3
Query:  388 SGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGHLKISKADMKKHIIPYL 843
            S   C      + A  YS  VQ+ L  + Y   P     Y     FL  +N E     N +YK+    L+  V++ F +D ++ P ++ WFG+Y  G     +P Q+T LYT+D +GLK +D+AG++ F++  G HL++S+     HIIP+L
Sbjct:  156 SSHICDFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQERGI--NESYKKNLMALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEMDNAGQLVFLATEGDHLQLSEEWFYAHIIPFL 305          
BLAST of CV884751 vs. ExPASy Swiss-Prot
Match: PPT1_BOVIN (Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=PPT1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.611e-18
Identity = 48/153 (31.37%), Postives = 81/153 (52.94%), Query Frame = -3
Query:  385 SGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGHLKISKADMKKHIIPYLK 843
            S   C      + A  Y+  +Q+ L  + Y   P     Y     FL  +N E     N +YK+    L+  V++ F +D ++ P ++ WFG+Y  G     +P Q++ LYT+D +GLK +D AG++ F+++ G HL++S+     HIIP+L+
Sbjct:  156 SSHICDFIRKTLNAGAYNKAIQERLVQAEYWHDPIREDIYRNHSIFLADINQERGV--NESYKKNLMALKKFVMVKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTLYTQDRLGLKAMDKAGQLVFLALEGDHLQLSEEWFYAHIIPFLE 306          
BLAST of CV884751 vs. ExPASy Swiss-Prot
Match: PPT1_DROME (Palmitoyl-protein thioesterase 1 OS=Drosophila melanogaster GN=Ppt1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.529e-13
Identity = 49/151 (32.45%), Postives = 75/151 (49.67%), Query Frame = -3
Query:  379 CIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGHLKISKADMKKHIIPYLKDQ 831
            C     L+    Y+  VQ  L  + Y   P    KY     FL  +NNEL    N  Y E    L+  V++ F +D ++ PKE+ WF YY  G    + P  ++K+Y +  +GL  +   G++ F+ V G HL ISKA   ++I+P L ++
Sbjct:  168 CDYITRLLDNAAYAPEVQKALVQATYWHDPIMENKYRLGSTFLADINNEL--FINKFYIENLQKLKKFVMVQFLNDTIVQPKESQWFQYYTTGQNKVIQPFTESKVYQD--LGLDKMHRQGQLVFLGVEGDHLAISKAWFIQNIVPLLLEK 314          
BLAST of CV884751 vs. ExPASy Swiss-Prot
Match: PPT2B_XENLA (Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN=ppt2-B PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.639e-12
Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = -3
Query:  442 GYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAG 759
            GY + P+   KYLE   FLPKLNNEL D  ++  K  F  L+ LVLI   DD+V+ P +++ FG+Y +     V+  +   +Y +D  GL++LD  G +   SV G
Sbjct:  163 GYWRDPHRYEKYLEYSAFLPKLNNELLDSNSTERKRNFLRLRKLVLIGGPDDEVIAPWQSSHFGFYNEK--EEVVNMKDQMVYQKDTFGLQSLDGRGAITIYSVPG 266          
BLAST of CV884751 vs. ExPASy Swiss-Prot
Match: PDF1_SCHPO (Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase fusion 1 OS=Schizosaccharomyces pombe GN=pdf1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11
Identity = 40/164 (24.39%), Postives = 77/164 (46.95%), Query Frame = -3
Query:  334 IANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGHLKISKADMKKHIIPYLKDQASVRVIESRKTKGPN 825
            + ++++   ++  ++Q+H+  + Y +      KYLE  KFL  LNNE+     +   E+   L NLV + F+ D ++ P  +  FG+  +     +   +       + +GLK L + G++  IS  G HL++   D    ++ Y KD+   +      T+  N
Sbjct:  153 VVHSILGLGIWHSWIQNHVVQAQYYRTEKQYDKYLENNKFLTHLNNEVLHDNYTRNIEKLKELDNLVAVSFERDDIVEPPYSTGFGWINETTGENI---EMEDFVLYESLGLKDLVNQGKLETISFPGRHLQMRWGDFDALVLKYFKDEKEEKTELEESTRPSN 313          
The following BLAST results are available for this feature:
BLAST of CV884751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PPT1_CAEEL5.248e-2739.61Palmitoyl-protein thioesterase 1 OS=Caenorhabditis... [more]
PPT3_DICDI2.523e-2142.50Palmitoyl-protein thioesterase 3 OS=Dictyostelium ... [more]
PPT1_RAT4.303e-2136.60Palmitoyl-protein thioesterase 1 OS=Rattus norvegi... [more]
PPT1_MOUSE4.758e-2035.29Palmitoyl-protein thioesterase 1 OS=Mus musculus G... [more]
PPT1_MACFA1.060e-1933.55Palmitoyl-protein thioesterase 1 OS=Macaca fascicu... [more]
PPT1_HUMAN1.060e-1933.55Palmitoyl-protein thioesterase 1 OS=Homo sapiens G... [more]
PPT1_BOVIN2.611e-1831.37Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=... [more]
PPT1_DROME2.529e-1332.45Palmitoyl-protein thioesterase 1 OS=Drosophila mel... [more]
PPT2B_XENLA1.639e-1239.62Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN... [more]
PDF1_SCHPO4.037e-1124.39Palmitoyl-protein thioesterase-dolichyl pyrophosph... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_010D01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884751 ID=CV884751; Name=CV884751; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTTTTAGAACTTTTCGCATTGGATGCAACCCAAATTAC
AATTAACTAACGTCTTAAGACGAGTTTTACACACCAAGGAGTGCTAGATG
GTAGGCCATCTTGGATCATCAATGAAACTAGCCATGCGTGGAGATGATCC
CCATCAATGAGTGGAAGTAGTGTTTTTCATAGTAATATACTTTAGAAATG
GTCATATCAATCTAAATTAATGGGCTTATCCTCTTGAGACTTCTAGTAGT
TCGACGAAAAAGCTCTTCACGGAAGATGGCCATACATAGGATGATGATCC
ATCGAACACCAGTTCAGTGGACCCCTCTTCCTCGTTCGGTCCTTTTGTCT
TCCTGCTTTCTATCACTCTGACCGATGCCTGATCCTTCAAATAAGGAATA
ATATGCTTCTTCATATCAGCTTTGGAGATTTTCAGATGACCTCCTGCCAC
ACTGATGAAGTGAACCCTTCCAGCATCATCTAAGGTTTTAAGGCCGATCC
AGTCTTCAGTATAAAGCTTTGTCTTTTGTGGAGGCAGAACTGGACTGAAG
GCCCCATCTGGATAATATCCGAACCAGGCTGTTTCCTTGGGTATCAAAAC
CTTGTCATCCTTGAACATTATAAGCACTAAGTTTTGCAAGCAGCTGAAGC
GTTCCTTGTAAGTGGAGTTCCTCTTATCAGGGAGTTCGTTGTTAAGCTTT
GGAAGGAACTTACATTTTTCCAAATACTTGGGGATGTCATTTGGAAATTT
AAGATATCCACTGGGAGCCAAATGATCTTGGACATAGTCACTGTAGACCT
CTGCCTTGATTAGGTTGTTTGCAATTATGCAAAAGATACCAGAACCACAA
AGGGGCA
back to top