CV884722

Overview
NameCV884722
Unique NameCV884722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3364 contig Csv1_Contig3364:1..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPB_DROME (Mannose-1-phosphate guanyltransferase beta OS=Drosophila melanogaster GN=CG1129 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.240e-49
Identity = 88/155 (56.77%), Postives = 120/155 (77.42%), Query Frame = -3
Query:  316 KLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 780
            +L+AM L GFWMDIGQP+D++TG+ LYL SLR+K S KL TG  +VGNVLV  +A+IGEGC IGP+V +GP  V+E GV + R T+++G  ++ H+ + S I+GW STVG+W R+E +T+LGEDV V DE+Y NGG VLPHK I +S+ +P+I+M
Sbjct:  215 ELYAMDLTGFWMDIGQPKDFLTGMCLYLSSLRQKQSPKLYTGPGVVGNVLVDPTAKIGEGCRIGPNVTIGPDVVIEDGVCIKRSTILKGAIVRSHSWLDSCIVGWRSTVGRWVRIEGITVLGEDVIVKDELYINGGQVLPHKSIAASVPEPQIIM 369          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPB_HUMAN (Mannose-1-phosphate guanyltransferase beta OS=Homo sapiens GN=GMPPB PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 5.527e-49
Identity = 90/156 (57.69%), Postives = 118/156 (75.64%), Query Frame = -3
Query:  316 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 783
            G+L+AM L GFWMDIGQP+D++TG+ L+L SLR+K   +L +G  IVGNVLV  SA+IG+ C IGP+V++GPG VVE GV + RCTV+R  RI+ H+ + S I+GW   VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  205 GQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKQPERLCSGPGIVGNVLVDPSARIGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDARIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM 360          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPB_DROPS (Mannose-1-phosphate guanyltransferase beta OS=Drosophila pseudoobscura pseudoobscura GN=GA10892 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.527e-49
Identity = 87/155 (56.13%), Postives = 119/155 (76.77%), Query Frame = -3
Query:  316 KLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 780
            +L+AM L GFWMDIGQP+D++TG+ LYL SLR+K S KL TG  +VGNVLV  +A IGEGC IGP+V +GP  ++E GV + R T+++G  ++ H+ + S I+GW STVG+W R+E +T+LGEDV V DE+Y NGG VLPHK I +S+ +P+I+M
Sbjct:  217 ELYAMDLTGFWMDIGQPKDFLTGMCLYLSSLRQKQSPKLYTGPGVVGNVLVDPTATIGEGCRIGPNVTIGPDVIIEDGVCIKRATILKGAIVRSHSWLDSCIVGWRSTVGRWVRIEGITVLGEDVIVKDELYVNGGQVLPHKSIAASVPEPQIIM 371          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPB_XENTR (Mannose-1-phosphate guanyltransferase beta OS=Xenopus tropicalis GN=gmppb PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.428e-49
Identity = 88/156 (56.41%), Postives = 117/156 (75.00%), Query Frame = -3
Query:  316 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 783
            G+LFAM L GFWMDIGQP+D++TG+ +YL S+R+K    L  G   +GNVLV  +A+IG+ C IGP+V +GPG  VE GVR+ RCT+M+G R+  H+ + SSI+GW S+VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  205 GQLFAMELQGFWMDIGQPKDFLTGMCMYLQSVRQKHPEWLHVGPGFIGNVLVDPTAKIGQNCSIGPNVTIGPGVTVEDGVRIKRCTIMKGSRLHSHSWLESSIVGWSSSVGQWVRMENVTVLGEDVIVNDELYLNGANVLPHKCISESVPEPRIIM 360          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPBA_XENLA (Mannose-1-phosphate guanyltransferase beta-A OS=Xenopus laevis GN=gmppb-A PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.608e-48
Identity = 88/156 (56.41%), Postives = 117/156 (75.00%), Query Frame = -3
Query:  316 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 783
            G+L+AM L GFWMDIGQP+D++TG+ +YL S+R+K    L  G   +GNVLV  +A+IG+ C IGP+V +GPG  VE GVR+ RCTVM+G R+  H+ + SSI+GW S+VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  205 GQLYAMELQGFWMDIGQPKDFLTGMCMYLQSVRQKHPEWLHAGPGFIGNVLVDPTAKIGQNCSIGPNVTIGPGVTVEDGVRIKRCTVMKGSRLHSHSWLESSIVGWSSSVGQWVRMENVTVLGEDVIVNDELYLNGANVLPHKCISESVPEPRIIM 360          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPB_MOUSE (Mannose-1-phosphate guanyltransferase beta OS=Mus musculus GN=Gmppb PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.679e-48
Identity = 89/156 (57.05%), Postives = 117/156 (75.00%), Query Frame = -3
Query:  316 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 783
            G+L+AM L GFWMDIGQP+D++TG+ L+L SLR+K   +L +G  IVGNVLV  SA+IG+ C IGP+V++GPG VVE GV + RCTV+R   I+ H+ + S I+GW   VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  205 GQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKHPERLYSGPGIVGNVLVDPSARIGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM 360          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPBB_XENLA (Mannose-1-phosphate guanyltransferase beta-B OS=Xenopus laevis GN=gmppb-B PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.111e-48
Identity = 86/156 (55.13%), Postives = 116/156 (74.36%), Query Frame = -3
Query:  316 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 783
            G+LFA+ L GFWMDIGQP+D++TG+ +YL S+R K   +L  G    GNVLV  +A+IG+ C IGP+V +GPG  VE GVR+ RC++M+G R+  H+ + SSI+GW S+VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  205 GQLFALELQGFWMDIGQPKDFLTGMCMYLQSVRHKHPERLHVGPGFTGNVLVDPTAKIGQNCSIGPNVTIGPGVTVEDGVRIKRCSIMKGSRLHSHSWLQSSIVGWSSSVGQWVRMENVTVLGEDVIVNDELYLNGANVLPHKCISESVPEPRIIM 360          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPB_BOVIN (Mannose-1-phosphate guanyltransferase beta OS=Bos taurus GN=GMPPB PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.981e-48
Identity = 89/156 (57.05%), Postives = 116/156 (74.36%), Query Frame = -3
Query:  316 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 783
            G+L+AM L GFWMDIGQP+D++TG+ L+L SLR+K   +L +G  IVGNVLV   A+IGE C IGP+V++GPG VVE GV + RCTV+R   I+ H+ + S I+GW   VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  205 GQLYAMELQGFWMDIGQPKDFLTGMCLFLKSLRQKHPEQLCSGPGIVGNVLVDPRARIGENCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM 360          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPB_PIG (Mannose-1-phosphate guanyltransferase beta OS=Sus scrofa GN=GMPPB PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.778e-47
Identity = 89/156 (57.05%), Postives = 117/156 (75.00%), Query Frame = -3
Query:  316 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 783
            G+L+AM L GFWMDIGQP+D++TG+ L+L SLR+K   +L +G  IVGNVLV  SA+IG+ C IGP+V++GPG VVE GV + RCTV+R  RI+ H+ + S I+ W   VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  205 GQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKQPEQLCSGPGIVGNVLVDPSARIGKNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDARIRSHSWLESCIVCWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPGIIM 360          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPB_DICDI (Mannose-1-phosphate guanyltransferase beta OS=Dictyostelium discoideum GN=gmppB PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.778e-47
Identity = 85/155 (54.84%), Postives = 117/155 (75.48%), Query Frame = -3
Query:  316 KLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 780
            +L+ M L GFWMD+GQP+D+++G+ LYL+SL+ K    LATG  I+G VL+  S+ I  GCLIGP+V +GP CV++ G RL   TV+ G  I K++ I S+IIGW+S++G+W R+EN ++LGEDVHV DE+Y NGG +LPHK I SSI +PEI+M
Sbjct:  205 QLYCMQLEGFWMDVGQPKDFLSGMGLYLNSLKSKQPELLATGNGIIGPVLIDPSSVIEPGCLIGPNVTIGPNCVIQEGTRLVNTTVLEGTTIGKNSWIKSTIIGWNSSIGKWVRMENTSVLGEDVHVSDELYINGGKILPHKSITSSIPEPEIIM 359          
The following BLAST results are available for this feature:
BLAST of CV884722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
GMPPB_DROME3.240e-4956.77Mannose-1-phosphate guanyltransferase beta OS=Dros... [more]
GMPPB_HUMAN5.527e-4957.69Mannose-1-phosphate guanyltransferase beta OS=Homo... [more]
GMPPB_DROPS5.527e-4956.13Mannose-1-phosphate guanyltransferase beta OS=Dros... [more]
GMPPB_XENTR9.428e-4956.41Mannose-1-phosphate guanyltransferase beta OS=Xeno... [more]
GMPBA_XENLA1.608e-4856.41Mannose-1-phosphate guanyltransferase beta-A OS=Xe... [more]
GMPPB_MOUSE4.679e-4857.05Mannose-1-phosphate guanyltransferase beta OS=Mus ... [more]
GMPBB_XENLA6.111e-4855.13Mannose-1-phosphate guanyltransferase beta-B OS=Xe... [more]
GMPPB_BOVIN7.981e-4857.05Mannose-1-phosphate guanyltransferase beta OS=Bos ... [more]
GMPPB_PIG1.778e-4757.05Mannose-1-phosphate guanyltransferase beta OS=Sus ... [more]
GMPPB_DICDI1.778e-4754.84Mannose-1-phosphate guanyltransferase beta OS=Dict... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010B11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884722 ID=CV884722; Name=CV884722; organism=Citrus sinensis; type=EST; length=785bp
AATAAATGCATTTATACGAACATCATTGACAATTACTGACACAGAAACCA
ACCTGATGGTTTATTGCCATATCTTTATCTACACTAAAGTTACAATTTCA
CTTCCCACACCAATGATAATTTTGAGCATTTTACAAGAGAAACTAAAAAA
GCCTTCAACTTTAGAACTCACACAACTCAAAAGACTAAAACACACGGAGT
TTTACAATTGTAAAGAAGATGAAGAAGGGATAAAGAACACATTACCGGGC
ACAATGACTGGATAACTTGCTACTCTCCGACCACATTCTCTACTTGCAAT
CTGATCAGTGGCTCACATGACTATCTCTGGCTTCAAAATGCTTGATTTTA
TCTCTTTGTGCGGCAAAACCACACCCCCATTGCTATAAATTTCATCGCAG
ACATGAACGTCTTCCCCGAGAATGGTCATGTTCTCTACACGAGCCCATTG
CCCAACAGTGGAGTGCCATCCAATGATACTGCTGGATATGCAAGCATGTT
TCTTGATGCGCACTCCACGCATCACTGTGCAGCGAGAGAGTCTAACTCCT
GACTCAACAACACAACCCGGGCCAACGGCAACATCGGGTCCAATCAAACA
TCCCTCCCCAATTTGAGCACTCTCATGCACCAAGACATTGCCTACAATGT
TAGCACCAGTGGCCAACTTGAATGAGGACTTCTTCCTCAGGGAGTCCAGA
TAGAGTCTCAAGCCTGTAATGTAATCCCTCGGCTGTCCAATGTCCATCCA
GAAACCTGGAAGAACCATCGCGAAGAGCTTTCCCT
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