CV884701

Overview
NameCV884701
Unique NameCV884701
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10867 contig Csv1_Contig10867:288..1119. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884701 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.542e-35
Identity = 87/237 (36.71%), Postives = 128/237 (54.01%), Query Frame = 3
Query:  144 ITKLQLAIYNVDR--HELKPAEAQIL-PEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNE-XXXXXXXXXXXXXXXXXXXTKQIKATSLAYCL--VDRDSPASGVLE--FNSARGGDAVTAPLIRNKKVDTFYYVGL 830
            +TK QL    ++R    L+  EA +  P    T V +G     GEY   + +GTP + FS ++DTGSD+ W QC+PCT+C+ QS PIF+P+ SSS+S LPC++  C++L    C  N C Y   YGDGS T G + TET++FG S S+  I  GCG +N+                      Q+  T  +YC+  +   +P++ +L    NS   G   T  LI++ ++ TFYY+ L
Sbjct:   54 LTKFQLLERAIERGSRRLQRLEAMLNGPSGVETSVYAG----DGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPIFNPQGSSSFSTLPCSSQLCQALSSPTCSNNFCQYTYGYGDGSETQGSMGTETLTFG-SVSIPNITFGCGENNQGFGQGNGAGLVGMGRGPLSLPSQLDVTKFSYCMTPIGSSTPSNLLLGSLANSVTAGSPNTT-LIQSSQIPTFYYITL 284          
BLAST of CV884701 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.247e-34
Identity = 84/236 (35.59%), Postives = 114/236 (48.31%), Query Frame = 3
Query:  144 ITKLQLAIYNVDRHELKPAEAQILPEDFS---TPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNE-XXXXXXXXXXXXXXXXXXXTKQIKATSLAYCLVDRDSPASGVLEFNSARGGDAVTAP---LIRNKKVDTFYYVGL 830
            +TK +L    + R E +      + +  S   TPV +G     GEY   + +GTP   FS ++DTGSD+ W QC PCT+C+ Q  PIF+P+ SSS+S LPC +  C+ L    C  N C Y   YGDGS T G + TET +F  S SV  IA GCG DN+                      Q+     +YC+    S +   L   SA  G    +P   LI +    T+YY+ L
Sbjct:   55 LTKYELIKRAIKRGERRMRSINAMLQSSSGIETPVYAG----DGEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTLPCESQYCQDLPSETCNNNECQYTYGYGDGSTTQGYMATETFTFETS-SVPNIAFGCGEDNQGFGQGNGAGLIGMGWGPLSLPSQLGVGQFSYCMTSYGSSSPSTLALGSAASGVPEGSPSTTLIHSSLNPTYYYITL 285          
BLAST of CV884701 vs. ExPASy Swiss-Prot
Match: NEP1_NEPDI (Aspartic proteinase nepenthesin-1 (Fragments) OS=Nepenthes distillatoria PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12
Identity = 45/115 (39.13%), Postives = 59/115 (51.30%), Query Frame = 3
Query:  258 GSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCG 602
            G GEY   + +GTP + FS ++DTGSD+ W Q +P T+ + QS    DP+ SSS+S LPC                       YGD S T G + TET +FG S S+  I  G G
Sbjct:   13 GDGEYLMXLSIGTPAQPFSAIMDTGSDLIWTQXQPXTQXFXQS----DPQGSSSFSTLPC----------------------GYGD-SETQGSMGTETFTFG-SVSIPNITFGXG 99          
BLAST of CV884701 vs. ExPASy Swiss-Prot
Match: ASPL2_ARATH (Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.734e-11
Identity = 39/129 (30.23%), Postives = 69/129 (53.49%), Query Frame = 3
Query:  264 GEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSD-----PIFDPKTSSSYSPLPCAAPQCKSLDVS-ACR-ANRCLYQVAYGDGSFTVGDLVTETVSFGN-SGSVK------GIALGCGHD 608
            G YF++I +G+PP+++ + +DTGSDI W+ C+PC +C  +++      +FD   SS+   + C    C  +  S +C+ A  C Y + Y D S + G  + + ++    +G +K       +  GCG D
Sbjct:   72 GLYFTKIKLGSPPKEYHVQVDTGSDILWINCKPCPKCPTKTNLNFRLSLFDMNASSTSKKVGCDDDFCSFISQSDSCQPALGCSYHIVYADESTSDGKFIRDMLTLEQVTGDLKTGPLGQEVVFGCGSD 200          
The following BLAST results are available for this feature:
BLAST of CV884701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
NEP1_NEPGR6.542e-3536.71Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR3.247e-3435.59Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
NEP1_NEPDI2.675e-1239.13Aspartic proteinase nepenthesin-1 (Fragments) OS=N... [more]
ASPL2_ARATH1.734e-1130.23Aspartic proteinase-like protein 2 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010A11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884701 ID=CV884701; Name=CV884701; organism=Citrus sinensis; type=EST; length=832bp
CAGAGTCTTTTCCTCTCAACTCTTCTTCTTCGTTCTCATTGCCGCTTCAC
TCGCGTGAAATCCTCCATAAGACGAGACACAATGATTACAGATCACTTGT
TTTATCTCGACTCGAGCGGGACTCAGCCCGAGTCAACACTCTTATCACGA
AACTCCAGCTGGCTATCTACAACGTAGACAGACACGAGCTCAAGCCCGCC
GAGGCACAGATCTTGCCGGAGGATTTCTCCACTCCGGTCGTGTCCGGTGC
CAGCCAGGGCAGCGGCGAATACTTCTCCCGAATTGGCGTCGGTACGCCGC
CGAGACAGTTCTCTATGGTGCTCGACACCGGCAGTGACATTAACTGGCTT
CAGTGCCGGCCTTGTACCGAGTGTTATCAACAATCCGATCCGATTTTTGA
CCCAAAAACGTCGTCGTCTTACAGTCCTCTCCCGTGTGCCGCTCCTCAGT
GTAAATCCCTCGACGTGTCCGCTTGTCGTGCGAACAGGTGCCTCTACCAA
GTGGCGTACGGTGATGGGTCTTTTACCGTGGGTGATTTGGTGACTGAAAC
GGTGTCGTTTGGAAACAGCGGGAGCGTGAAGGGTATCGCTTTGGGTTGCG
GTCATGATAATGAAGGGCTCTTTGTTGGATCTGCCGGCTTGCTTGGACTT
GGGGGTGGCATGCTCTCTCTTACTAAGCAAATTAAAGCGACGTCATTGGC
TTACTGCTTGGTGGACCGTGACTCTCCCGCCTCTGGTGTTCTCGAGTTCA
ACTCGGCACGAGGCGGTGACGCGGTCACGGCTCCGTTGATTAGGAACAAA
AAAGTTGACACGTTCTATTACGTGGGGCTCAC
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