CV884661

Overview
NameCV884661
Unique NameCV884661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5066 contig Csv1_Contig5066:181..1072. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884661 vs. ExPASy Swiss-Prot
Match: CP74A_ARATH (Allene oxide synthase, chloroplastic OS=Arabidopsis thaliana GN=CYP74A PE=1 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 7.250e-51
Identity = 103/242 (42.56%), Postives = 149/242 (61.57%), Query Frame = -3
Query:  192 ALVSGDYNKLHNFVEKEGKEVVQRGQDEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKE--KCGTSALTFESVKSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESI--------TGNSSSITAVEKA 887
            ALV  DY +L+ F  +   E++    D+ G+++EEA HNLLF   FN +GG  I  P ++  I      +  +L  E++   K     LT  +++ +EL +SVVYE LR  PPV  Q+ RA+KD  + S+D+ + +K GE+L GYQPL  RD K+FD A+ F  ERF+GE+G +LL ++ WSNGP+T TP   NKQCAGKD+V LVA L V  +F+RY+S          G+S + +++ KA
Sbjct:  276 ALVKSDYQRLYEFFLESAGEILVEA-DKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFSSLRKA 516          
BLAST of CV884661 vs. ExPASy Swiss-Prot
Match: CP74_LINUS (Allene oxide synthase, chloroplastic OS=Linum usitatissimum GN=CYP74A PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.047e-49
Identity = 96/220 (43.64%), Postives = 144/220 (65.45%), Query Frame = -3
Query:  234 LVSGDYNKLHNFVEKEGKEVVQRGQDEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVK---EKCGTSALTFESVKSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYES 884
            LV  DY++L+ F       V+   +   G++++EA HN+LF + FN++GGF I  P L+  I      L  KL  E++   +  G   +T  +++ + L++SVVYETLR+ PPV LQ+ +A+KDF L S+++ Y +K+GE+L GYQP   +D K+FD  E F A+RF+GE G +L+ Y+ WSNGP+T TP+  NKQCAGKD+V + A L V  +F+RY+S
Sbjct:  295 LVQNDYHRLYEFFTSAAGSVLDEAEQS-GISRDEACHNILFAVCFNSWGGFKILFPSLMKWIGRAGLELHTKLAQEIRSAIQSTGGGKVTMAAMEQMPLMKSVVYETLRIEPPVALQYGKAKKDFILESHEAAYQVKEGEMLFGYQPFATKDPKIFDRPEEFVADRFVGE-GVKLMEYVMWSNGPETETPSVANKQCAGKDFVVMAARLFVVELFKRYDS 512          
BLAST of CV884661 vs. ExPASy Swiss-Prot
Match: C74A2_PARAR (Allene oxide synthase OS=Parthenium argentatum GN=CYP74A2 PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 5.744e-48
Identity = 90/220 (40.91%), Postives = 143/220 (65.00%), Query Frame = -3
Query:  234 LVSGDYNKLHNFVEKEGKEVVQRGQDEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVK---EKCGTSALTFESVKSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYES 884
            L+   YNKL+++ +     V+++ + + G+ K+EA+HN+LF + FN FGG  I  P  +  I      L  +L  E++   +  G   +T E+++ + L +SVVYE+LR+ PPVP Q+ +A+ +F + S+D+ +++KKGE+L GYQP   +D KVFD  E +  +RF+G+ G  LL Y++WSNGP+T +P   NKQCAGKD+V L+  L V  +F+RY+S
Sbjct:  232 LIKSTYNKLYDYFQSVATPVMEQAE-KLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGD-GEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDS 449          
BLAST of CV884661 vs. ExPASy Swiss-Prot
Match: C74A1_ORYSJ (Allene oxide synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CYP74A1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.744e-48
Identity = 96/242 (39.67%), Postives = 152/242 (62.81%), Query Frame = -3
Query:  192 ALVSGDYNKLHNFVEKEGKEVVQRGQDEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKEKCGTSA--LTFESVKSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESI--------TGNSSSITAVEKA 887
            ALV  DY++L +F     K VV  G+   G+ +EEA+HN+LF L FN+FGG  I  P L+  +      +  +L +EV+     +   +T +++  + LV+S VYE LR+ PPV +Q+ RA++D  + S+D  Y++++GE+L GYQP+  +D +VF   E +  +RF+GE G+ LL ++ WSNGP+T  P   +KQCAGKD+V LVA L++  +F RY+S          G+S ++T+++KA
Sbjct:  270 ALVKKDYDRLADFFRDAAKAVVDEGE-RLGIAREEAVHNILFALCFNSFGGMKILFPTLVKWLGRAGARVHGRLATEVRGAVRDNGGEVTMKALAEMPLVKSAVYEALRIEPPVAMQYGRAKRDMVVESHDYGYEVREGEMLFGYQPMATKDPRVFARPEEYVPDRFLGEDGARLLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLVELFLRYDSFDVEVGTSTLGSSVTVTSLKKA 510          
BLAST of CV884661 vs. ExPASy Swiss-Prot
Match: C74A4_ORYSJ (Allene oxide synthase 4 OS=Oryza sativa subsp. japonica GN=CYP74A4 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.351e-47
Identity = 95/199 (47.74%), Postives = 134/199 (67.34%), Query Frame = -3
Query:  222 GLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKEKC--GTSALTFESV-KSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGS---ELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESITGN 800
            G+ ++E +HNL+F+  FNA+GGF IF+P ++  +A     L AKL SEV+     G   +T  +V K + LV+SVV+E LR+NPPV  Q+ RAR+D  + S+D+ Y+++KGELL GYQPL  RD KVFD A  F  +RF+   GS    LL ++ WSNGP+TGTP++ NKQC GKD V  V  L+VA +F+RY++   +
Sbjct:  283 GIPRDELLHNLVFVAVFNAYGGFKIFLPHIVKWLARAGPELHAKLASEVRAAAPAGGGEITISAVEKEMPLVKSVVWEALRMNPPVEFQYGRARRDMVVESHDAAYEVRKGELLFGYQPLATRDEKVFDRAGEFVPDRFVSGAGSAARPLLEHVVWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRYDTFAAD 481          
BLAST of CV884661 vs. ExPASy Swiss-Prot
Match: C74A2_ORYSJ (Allene oxide synthase 2 OS=Oryza sativa subsp. japonica GN=CYP74A2 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 9.171e-46
Identity = 95/237 (40.08%), Postives = 147/237 (62.03%), Query Frame = -3
Query:  192 LVSGDYNKLHNFVEKEGKEVVQRGQDEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKEKCGTSA--LTFESVKSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFD-DAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESIT---GNSSSITAVEKA 884
            L+S DY  L+ +      + +   +   GL++EEA HNLLF   FN++GGF + +P++++ +A     L  +L +E++     +   +T  +++ +EL +SVV+E LRL+PPV  Q+ RA+ D ++ S+D+ + IKKGE+L GYQP   RD +VF   A  F  +RF+GE+G +LL Y+YWSNG +T  P+  NKQC GK+ V LV  L++  +F RY++ T   G    IT V KA
Sbjct:  234 LISSDYKALYAYFAAAASQALDAAEG-LGLSREEACHNLLFATVFNSYGGFKLLLPQILSRVAQAGEKLHERLAAEIRSAVADAGGNVTLAALEKMELTRSVVWEALRLDPPVRFQYGRAKADLEIESHDASFAIKKGEMLFGYQPCATRDPRVFGATAREFVGDRFVGEEGRKLLQYVYWSNGRETENPSVDNKQCPGKNLVVLVGRLLLVELFLRYDTFTAEAGKKVVITGVTKA 469          
BLAST of CV884661 vs. ExPASy Swiss-Prot
Match: C74A3_ORYSJ (Allene oxide synthase 3 OS=Oryza sativa subsp. japonica GN=CYP74A3 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.584e-44
Identity = 90/199 (45.23%), Postives = 131/199 (65.83%), Query Frame = -3
Query:  222 GLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKEKCGTS---ALTFESVKSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFM--GEKGSE-LLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESITGN 800
            G+ ++E + NL+F+  FNAFGGF IF+P ++  +A     L AKL +EV+    T     +T  +V+ + LV+SVV+E LR+NPPV  Q+  AR+D  + S+D+ Y+++KGE+L GYQPL  RD KVFD A  F A+RF+  G  G   LL ++ WSNGP+T  P++ NKQC GKD V  V  L+VA +F+RY++   +
Sbjct:  281 GIPRDELLDNLVFVAIFNAFGGFKIFLPHIVKWLARAGPELHAKLATEVRATVPTGEDDGITLAAVERMPLVKSVVWEALRMNPPVEFQYGHARRDMVVESHDAAYEVRKGEMLFGYQPLATRDEKVFDRAGEFVADRFVAGGAAGDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTFAAD 479          
The following BLAST results are available for this feature:
BLAST of CV884661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CP74A_ARATH7.250e-5142.56Allene oxide synthase, chloroplastic OS=Arabidopsi... [more]
CP74_LINUS1.047e-4943.64Allene oxide synthase, chloroplastic OS=Linum usit... [more]
C74A2_PARAR5.744e-4840.91Allene oxide synthase OS=Parthenium argentatum GN=... [more]
C74A1_ORYSJ5.744e-4839.67Allene oxide synthase 1, chloroplastic OS=Oryza sa... [more]
C74A4_ORYSJ6.351e-4747.74Allene oxide synthase 4 OS=Oryza sativa subsp. jap... [more]
C74A2_ORYSJ9.171e-4640.08Allene oxide synthase 2 OS=Oryza sativa subsp. jap... [more]
C74A3_ORYSJ8.584e-4445.23Allene oxide synthase 3 OS=Oryza sativa subsp. jap... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008G09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884661 ID=CV884661; Name=CV884661; organism=Citrus sinensis; type=EST; length=892bp
GAGACTTTTTTTTCATTCACCGGTTCGCTACTACTACATCCAAGGGAACC
GGTGGGACCCATCTCTACATAACTTTCTCTATTAACAACCAAACCAGACA
AACGTTACAACTCGACGTTACGTTCACGATCCATCACCGTCATACGACCC
CATTCACGTGATGATGCTCACGTTCAAAATCACCATCACTTGGCCTTTTC
AACGGCCGTGATCGAAGATGAGTTCCCAGTAATAGACTCGTACCTTTGGA
ACACATAAGCCACGATCAAACAAGCAACGAGAGTCACGTAATCCTTTCCG
GCACACTGCTTGTTCATGTCATTGGGAGTCCCCGTCTGTGGCCCATTTGA
CCAATACAAGTAACTCAACAACTCGCTCCCCTTTTCGCCCATAAACCTCT
CAGCCTTAAAACTCTCAGCATCGTCAAACACCTTCGAATCCCTCATGACC
AAAGGCTGATACCCGCAAAGCAACTCACCTTTCTTGATATCGTACACCGA
GTCGTACGAGCTCAGTTGGAAGTCCTTCCTTGCCCTTGCAAACTGGAGAG
GAACCGGTGGGTTAAGTCTCAGAGTTTCGTAAACCACAGACTGAACCAAC
TCTAGACTCTTGACTGACTCAAAAGTCAAGGCGGATGTCCCACATTTCTC
TTTCACTTCACTTCTTAACTTTGCCTGCAACCCAGTTGTGTCACTAGCAA
TTGCATTAATCAGCTTTGGCACAAAAATAGAGAACCCACCGAAAGCATTA
AACCCTAGAATGAACAGCAAGTTGTGAATGGCCTCTTCTTTTGTTAGCCC
AAACTCGTCCTGCCCCCGCTGCACAACTTCTTTGCCTTCCTTTTCAACGA
AGTTGTGGAGCTTGTTGTAGTCTCCACTGACAAGGGCAAAAG
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