CV884657

Overview
NameCV884657
Unique NameCV884657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length479
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV884657 vs. ExPASy Swiss-Prot
Match: TOM6_ARATH (Mitochondrial import receptor subunit TOM6 homolog OS=Arabidopsis thaliana GN=TOM6 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.799e-13
Identity = 32/42 (76.19%), Postives = 38/42 (90.48%), Query Frame = -1 
Query:  294 MFPGMFMKKPDKAAALKQLRSHVAMFGTWVVVIRVTPYLLHY 419
            MFPGMFM+KPDKA ALKQLR+HVA+FG+WVV+IR  PY+L Y
Sbjct:    1 MFPGMFMRKPDKAEALKQLRTHVALFGSWVVIIRAAPYVLSY 42
The following BLAST results are available for this feature:
BLAST of CV884657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TOM6_ARATH1.799e-1376.19Mitochondrial import receptor subunit TOM6 homolog... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_008G07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884657 ID=CV884657; Name=CV884657; organism=Citrus sinensis; type=EST; length=479bp
AGATACTACTACCAAAAGTAAATTCAACAAGAATAATCATAGACCAGTTA
TTGCATTTTACGAAAGTACCCACCCACGCTTCAAACTCAATAACAAGTTA
CAGGTATGTTACCCCTGCCAAATCCAGGGCATACATTAAAAACAATTATG
ACACTTCTAAACAGCGCGCCACTTTCTCTTCATCTTCATCTTACAGCTGC
CGCACCACCAAACACAGAGAAAAAGACGGTTCAGCTAGAGAGAGAAAGAG
AGAGTTAGAATTCGAGCTTGAGCTCTTCTTTTTCTCTGGAGAAATAGTGA
AGAAGGTAGGGGGTGACGCGAATCACAACGACCCAGGTCCCGAACATGGC
CACGTGGCTCCGCAGCTGCTTCAAGGCCGCCGCCTTGTCTGGCTTCTTCA
TGAACATTCCCGGAAACATCCTTGCTTCGGCTTAAACCCTAGCTTTGTGT
TACTCTGTTGATCAGACGCTTCAATACCT
back to top