CV884608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884608 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.525e-60 Identity = 122/214 (57.01%), Postives = 143/214 (66.82%), Query Frame = 2 Query: 50 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQ 691 MA+TFSDLHTE G+KS++++L+GK+YISG+QL+ DD+KVYAAV VKP+D+FPNAS WY+SV+S+LA SFPGKAVGV+ VL+DVKPWDDETDMKKLEEAVR VEMPGLFWGASKLVPVGYGIKKL IM TIVDDLVS D+LIE+ LT+EP NEYIQ Sbjct: 1 MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYESVASQLAKSFPGKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDETEEEKKAAEEREAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQ 214
BLAST of CV884608 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 224.557 bits (571), Expect = 4.031e-58 Identity = 119/214 (55.61%), Postives = 137/214 (64.02%), Query Frame = 2 Query: 50 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQ 691 MA+TF+DLHT GLK+L+Q+LSGK+Y+SGN ++KDDIKV+AAV KP FPNA+ WYD+V++ LA FPGKAVGV VLLDVKPWDDETDMKKLEEAVRSV+M GL WGASKLVPVGYGIKKLQIM+TIVDDLVSVDSLIEEHLT EP NE++Q Sbjct: 1 MAVTFTDLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAAALASRFPGKAVGVNLPGGGAASSAAAAAPAAKDADEDDDDLDLFGDETEEDKKAADERAASKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQ 214
BLAST of CV884608 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 7.654e-33 Identity = 68/77 (88.31%), Postives = 74/77 (96.10%), Query Frame = 2 Query: 461 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQ 691 VLL+VKPWDDETDMKKLEEAVRSV+MPGL WGASKLVPVGYGIKKL IM+TIVDDLVSVD+LIE+HLT+EP NEYIQ Sbjct: 142 VLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQ 218 HSP 2 Score: 120.168 bits (300), Expect = 1.071e-26 Identity = 56/77 (72.73%), Postives = 67/77 (87.01%), Query Frame = 2 Query: 50 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGVR 280 MA+TFSDLHTE GLK+L+++L+GK+YISG+QL+ DD+KVYAAVL P D FPNAS WYDSV+S LA SFPGKA GVR Sbjct: 1 MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLAKSFPGKADGVR 77
BLAST of CV884608 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32 Identity = 63/77 (81.82%), Postives = 71/77 (92.21%), Query Frame = 2 Query: 461 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQ 691 VL+D+KPWDDETDMKKLEEAVRS++M GLFWGASKLVPVGYGIKKL IM TIVDDLVS+D++IEE LT EP NEY+Q Sbjct: 145 VLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQ 221
BLAST of CV884608 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.105e-31 Identity = 62/77 (80.52%), Postives = 72/77 (93.51%), Query Frame = 2 Query: 461 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQ 691 VL+D+KPWDDETDMKKLEEAV+S++M GLFWGASKLVPVGYGIKKLQI+ TIVDDLVS+D++IEE LT EP NEY+Q Sbjct: 145 VLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQ 221
BLAST of CV884608 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 135.576 bits (340), Expect = 2.462e-31 Identity = 65/77 (84.42%), Postives = 71/77 (92.21%), Query Frame = 2 Query: 461 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQ 691 VLLDVKPWDDETDM KLEEAVRS++M GL WGASKLV VGYGIKKLQIM+TIVDDLVSVD L+E++LTAEP NEYIQ Sbjct: 140 VLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQ 216 HSP 2 Score: 70.4774 bits (171), Expect = 9.728e-12 Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 50 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRL 244 MA+TF DL +E+GL+ LD+YL +SYISG Q +KDD+ V+AA+ P+ + N S WY+ V + L Sbjct: 1 MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALL 65
BLAST of CV884608 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 9.357e-31 Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 2 Query: 461 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQ 691 VLLDVKPWDDETDM KLEEAVR+V+M GL WGASKLVPVGYGIKKLQIM+TIVDDLVSVDSLIE++ EP NEYIQ Sbjct: 143 VLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQ 219
BLAST of CV884608 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 2.722e-30 Identity = 64/77 (83.12%), Postives = 70/77 (90.91%), Query Frame = 2 Query: 461 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQ 691 VLLDVKPWDDETDM KLEEAVR+V+M GL WGASKLVPVGYGIKKLQIM+TIVDDLVSVDSLIE++ EP NE+IQ Sbjct: 140 VLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQ 216 HSP 2 Score: 68.9366 bits (167), Expect = 2.830e-11 Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 2 Query: 50 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPS 253 MAIT S++++E+GL+ LD+YL +SYISG Q +KDD+ V+ ++ PA S+ N + WYD +S+ L S Sbjct: 1 MAITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLRSS 68
BLAST of CV884608 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.351e-29 Identity = 64/77 (83.12%), Postives = 70/77 (90.91%), Query Frame = 2 Query: 461 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQ 691 VLLDVKPWDDETDMKKLEEAVRSV+ GL GASKLVPVGYGIKKL IM+TIVDDLVSVD+LIE++LT EP NEY+Q Sbjct: 145 VLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQ 221
BLAST of CV884608 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.068e-26 Identity = 58/77 (75.32%), Postives = 65/77 (84.42%), Query Frame = 2 Query: 461 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQ 691 VL+D+KPWDDETDMKKLEEAVRSV+M GL WGASKL+PVGYGIKKLQIM+TI+DDL S IEE L P NEY+Q Sbjct: 132 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTIIDDLASTP--IEEVLCEAPINEYVQ 206 HSP 2 Score: 102.449 bits (254), Expect = 2.310e-21 Identity = 45/76 (59.21%), Postives = 64/76 (84.21%), Query Frame = 2 Query: 50 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGV 277 MA+TFSDLHT GLK+L+ +L+GK+YISG+ +TKDD+KV+AAV +KP+ FPNA+ WYD+V++ ++ FPG+A GV Sbjct: 1 MAVTFSDLHTADGLKALEAHLAGKTYISGDGITKDDVKVFAAVPLKPSAEFPNAARWYDTVAAAVSSRFPGQASGV 76 The following BLAST results are available for this feature:
BLAST of CV884608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884608 ID=CV884608; Name=CV884608; organism=Citrus sinensis; type=EST; length=691bpback to top |