CV884589

Overview
NameCV884589
Unique NameCV884589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3482 contig Csv1_Contig3482:426..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 8.130e-70
Identity = 130/203 (64.04%), Postives = 162/203 (79.80%), Query Frame = 2
Query:   20 EPHLFPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFEN--GLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEKTPALFRRVTTEEFLKAVFSRELHEKSLLDYMRI 622
            +PHLFPKLP   RDTLE+YS+EV ++A  LI++MA+ L IK EE+ + F++   +QSMRMNYYPPCPQP +V+GLTPHSDSV LT+L+Q+N+ EGLQIKKDGKW PV+PLPNAFIVNIGD+LE+ITNG Y SIEHR VVNSE+ERLSIATFH V    EVGPA SL+  +  A F+R+T +E+   +FSR L  K+ LD +RI
Sbjct:  156 KPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.953e-39
Identity = 83/197 (42.13%), Postives = 128/197 (64.97%), Query Frame = 2
Query:   32 FPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEKTPALFRRVTTEEFLKAVFSRELHEKSLLDYMRI 622
            +P  P S R+T+E YS E+  +AM L   MAK L ++ E + +     + +      P     G+ +GL+PHSD+  LT+L+Q+NE  GL IKKD KW P++P+  AF+VNIGD++E+++NG+Y SIEHRAV+N+++ERLSIA FH  +Y  ++GP P L+ E     ++ +  E++L    + +L  KSLLD M++
Sbjct:  158 WPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRT-VFNREDELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLVKE-NGVKYKTIDYEDYLIRSSNIKLDGKSLLDQMKL 352          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.074e-29
Identity = 66/172 (38.37%), Postives = 105/172 (61.05%), Query Frame = 2
Query:   32 FPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFF--ENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEKTPALFR 541
            +PK PP+ R+  E Y+  +  +  NL   ++  L ++    ++    ++ +  M++NYYPPCP+P   +G+  H+D  A+T+L+  NE  GLQ+ KDG W+  + +PNA IV+IGD +E+++NG Y S+ HR  VN E+ R+S   F     D EVGP P L+ E+ PA F+
Sbjct:  148 WPKNPPAYREANEEYAKRLQLVVDNLFKYLSLGLDLEPNSFKDGAGGDDLVYLMKINYYPPCPRPDLALGVA-HTDMSAITVLVP-NEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKEKTRMSWPVFLEPPPDHEVGPIPKLVNEENPAKFK 317          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.832e-29
Identity = 64/180 (35.56%), Postives = 107/180 (59.44%), Query Frame = 2
Query:   32 FPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFF--ENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEKTPALFRRVTTEEFL 565
            +PK PPS R+  E Y   +  +   +   ++  L ++  E+ E    +  +  +++NYYPPCP+P   +G+  H+D   +TIL+  NE +GLQ+ KDG W+ V+ +PNA IV+IGD +E+++NG Y S+ HR  VN ++ R+S   F     + EVGP P L++E  P  F+    ++++
Sbjct:  161 WPKNPPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVP-NEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHEVGPIPKLLSEANPPKFKTKKYKDYV 339          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.093e-29
Identity = 64/148 (43.24%), Postives = 89/148 (60.14%), Query Frame = 2
Query:   74 YSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLIT 517
            Y  E+  L++ ++  +   L ++    REFF +    MR NYYPPCP+P + +G  PH D  ALTILLQ ++  GL++  DG+W PV P+P A ++NIGD    ++NG Y S  HRAVVN  +ER S+A F   + D  V P PS  T
Sbjct:  192 YCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ-DDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAAT 338          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.093e-29
Identity = 64/148 (43.24%), Postives = 89/148 (60.14%), Query Frame = 2
Query:   74 YSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLIT 517
            Y  E+  L++ ++  +   L ++    REFF +    MR NYYPPCP+P + +G  PH D  ALTILLQ ++  GL++  DG+W PV P+P A ++NIGD    ++NG Y S  HRAVVN  +ER S+A F   + D  V P PS  T
Sbjct:  192 YCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ-DDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAAT 338          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 61/179 (34.08%), Postives = 98/179 (54.75%), Query Frame = 2
Query:   32 FPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEKTPALFRRVTTEEFLK 568
            +P  P  LRD +E ++++   +   L+  + + + I+ +        G   + +N+YP CP P K +G  PH D   +T+LL      GL++   G W  V P PNAF+VN G  LEV+TNG+  SIEHRA+ NS   R S+ATF +   +  +GPA   ++++ P  +R     +F++
Sbjct:  138 WPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLP-GAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNSALARTSVATFIMPTQECLIGPAKEFLSKENPPCYRTTMFRDFMR 315          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.313e-27
Identity = 64/185 (34.59%), Postives = 101/185 (54.59%), Query Frame = 2
Query:    8 LSSEEPHLFPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEKTPALFRRVTTEEF 562
            L S +   +P  P  LR+ +  Y++    +AM ++  + + L ++ +        G   + +NYYPP P P + +GL PH D   +T+LL      GL+I   G W  V+P+PN+ ++N G  LEV+TNG   ++EHRA  N  + RLS+A+F +   D  VGPA   ++E  P  +R +T  EF
Sbjct:  129 LPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLP-GAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNFAEPRLSVASFIVPADDCVVGPAEEFVSEDNPPRYRTLTVGEF 312          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.715e-27
Identity = 59/182 (32.42%), Postives = 108/182 (59.34%), Query Frame = 2
Query:   26 HLFPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFF--ENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEKTPALFRRVTTEEFL 565
            + +P  PP  R+  E Y+  +  +   L   ++  + ++  E+++    ++ +  +++NYYPPCP+P   +G+  H+D  A+TIL+  NE +GLQ+ KD  W+ V+ +PNA I++IGD +E+++NG Y S+ HR  VN ++ R+S   F     +   GP   LIT++ PA F+    ++++
Sbjct:  148 NFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVP-NEVQGLQVHKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPPELLTGPISKLITDENPAKFKTKKYKDYV 328          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.820e-27
Identity = 59/163 (36.20%), Postives = 101/163 (61.96%), Query Frame = 2
Query:   32 FPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFF--ENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLI 514
            +PK PPS R+  E Y+  ++ +   L   ++  L ++ +E+++    +N    +++NYYPPCP+P   +G+  H+D   +TIL+  N+ +GLQ  KDG+W+ V+ +PNA +++IGD +E+++NG Y S+ HR  VN ++ R+S   F     D  VGP P L+
Sbjct:  150 WPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVP-NDVQGLQACKDGRWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRTTVNKDKTRISWPVFLEPPADHVVGPHPQLV 311          
The following BLAST results are available for this feature:
BLAST of CV884589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
SRG1_ARATH8.130e-7064.04Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
NCS1_COPJA1.953e-3942.13S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
FLS_EUSGR1.074e-2938.37Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
FLS_PETHY1.832e-2935.56Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
GAOX2_ORYSJ9.093e-2943.24Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI9.093e-2943.24Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
IDS3_HORVU1.188e-2834.082'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
IDS2_HORVU1.313e-2734.59Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
FLS_PETCR1.715e-2732.42Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
FLS_MALDO3.820e-2736.20Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008D06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884589 ID=CV884589; Name=CV884589; organism=Citrus sinensis; type=EST; length=827bp
ACTCTTCCTGTCCTCTGAGGAACCCCACTTGTTTCCTAAGCTCCCTCCTT
CTCTCAGGGATACGTTGGAAGTTTACTCAACGGAAGTAAATGCTCTAGCG
ATGAATTTAATATCGAGAATGGCAAAAGTCTTACATATCAAGGATGAGGA
AGTGAGAGAATTCTTCGAAAATGGATTGCAATCAATGAGGATGAACTATT
ATCCTCCATGTCCTCAACCGGGGAAAGTTATGGGCCTTACACCCCATTCT
GATAGCGTTGCACTTACCATTCTCCTACAAATCAATGAAGCTGAAGGTCT
CCAGATTAAGAAGGATGGAAAGTGGTTTCCTGTTCGGCCGCTGCCAAATG
CTTTTATTGTCAACATTGGAGACATGCTGGAGGTAATAACGAATGGAGTA
TACCCTAGCATTGAGCATCGTGCAGTAGTAAACTCTGAGCAAGAAAGACT
CTCCATTGCCACTTTTCACTTGGTGAAATATGATGGTGAAGTAGGTCCAG
CACCCAGTTTGATCACTGAGAAAACACCAGCATTGTTCAGAAGAGTGACA
ACTGAAGAGTTCCTCAAGGCCGTCTTCTCTCGTGAGCTTCACGAAAAATC
TCTTTTGGATTACATGAGAATAGAACACAGTCAGGTCTAAGGCCAGTTTA
TTTGAGTTGTGAAAGAGTGAAAGATCTAGTCAAAAAACATCAAATGACAG
GTGCTCTTAAGATCGTGTCAGTATTAGAAAGAAGAAATAAGTTCTACAAA
AACAGTAAGAAGACTGGTAATCCCATGGTCATCGTGTTGATTATGTTTTA
ATGTAACTCAGATTATGTGAAATAAAG
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