CV884588
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884588 vs. ExPASy Swiss-Prot
Match: RL183_ARATH (60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 1.456e-84 Identity = 152/174 (87.36%), Postives = 167/174 (95.98%), Query Frame = 2 Query: 2 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 523 MGIDL+AGGKSKK+KRTAPKSDD+YLKLLVKLYRFLVRR++SNFN VILKRLFMSKVNK PLSLSRL+ FM GK+DKIAV+VGT+TDD+R +E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHS+TKPYVR KGRKFE Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFE 174
BLAST of CV884588 vs. ExPASy Swiss-Prot
Match: RL182_ARATH (60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=2 SV=2) HSP 1 Score: 311.997 bits (798), Expect = 1.456e-84 Identity = 152/174 (87.36%), Postives = 166/174 (95.40%), Query Frame = 2 Query: 2 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 523 MGIDL+AGGKSKK+KRTAPKSDD+YLKL VKLYRFLVRRT+S FN VILKRLFMSKVNK PLSLSRL+ FM GKEDKIAV+VGT+TDD+R +E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR+KGRKFE Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFE 174
BLAST of CV884588 vs. ExPASy Swiss-Prot
Match: RL18_CICAR (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18 PE=2 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 1.410e-79 Identity = 148/171 (86.55%), Postives = 160/171 (93.57%), Query Frame = 2 Query: 11 DLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 523 DL AGGK+KK+KRT+PKS+DIYLKLLVKLYRFLVRRTDSNFN VILKRLFMSKVN+PPLSLSRLI +M+GKE KI VVVG VTDDIR Y+VP +KVTAL+FTETARARI+KAGGECLTFDQLALR PL +TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE Sbjct: 1 DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 170
BLAST of CV884588 vs. ExPASy Swiss-Prot
Match: RL181_ARATH (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana GN=RPL18A PE=2 SV=3) HSP 1 Score: 278.1 bits (710), Expect = 2.330e-74 Identity = 139/175 (79.43%), Postives = 153/175 (87.43%), Query Frame = 2 Query: 2 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 523 MGIDL+AGGKSKK+KRT PKSDD+YLKLLVK R+LVRRT+S FN VILKRLFMSKVNK PLSLSRL+ +M GK+ KIAV+VGTVTDD+R +VPAL VTALRFTE+ARARI KAGGECLTFDQLAL P +NTVLLRGPKN REAVKHFGPAPGVPHSHTKPYVR G+K E Sbjct: 1 MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIE 175
BLAST of CV884588 vs. ExPASy Swiss-Prot
Match: RL18_ICTPU (60S ribosomal protein L18 OS=Ictalurus punctatus GN=rpl18 PE=2 SV=3) HSP 1 Score: 235.728 bits (600), Expect = 1.326e-61 Identity = 119/176 (67.61%), Postives = 139/176 (78.98%), Query Frame = 2 Query: 2 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 523 MG+D + K +K RT PKS DIYL+LLVKLYRFL RR+D+ FNKV+LKRLFMSK N+PPL+LSRLI MK G+E+KIAVVVGT+TDD+R +P LKV ALR T AR RI KAGG+ +TFDQLA+ P GQ TVLL GP+ ARE +HFG APG PHSHTKPY+RSKGRKFE Sbjct: 1 MGVD-IRHNKDRKVHRTEPKSQDIYLRLLVKLYRFLARRSDAPFNKVVLKRLFMSKTNRPPLALSRLIRKMKLQGRENKIAVVVGTITDDVRILNIPKLKVCALRVTAGARRRILKAGGQVMTFDQLAVTTPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYIRSKGRKFE 175
BLAST of CV884588 vs. ExPASy Swiss-Prot
Match: RL18_TIMBA (60S ribosomal protein L18 OS=Timarcha balearica GN=RpL18 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 2.954e-61 Identity = 118/176 (67.05%), Postives = 142/176 (80.68%), Query Frame = 2 Query: 2 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 523 MGID + +K +RT PKS D+YL+LLVKLYR+L RRT + FNK+ILKRLFMSK+ +PP+SLS+++ FMK G+E AV+VGTVTDD R +E+P L + ALR T+TARA I KAGGE +TFDQLALR+P G TVLL+G +NAREAVKHFGPAPGVPHSH KP VRSKGRKFE Sbjct: 1 MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRYLARRTGAKFNKIILKRLFMSKIYRPPISLSKVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSICALRVTQTARAGILKAGGEVITFDQLALRSPTGSKTVLLQGKRNAREAVKHFGPAPGVPHSHAKPLVRSKGRKFE 175
BLAST of CV884588 vs. ExPASy Swiss-Prot
Match: RL18_MOUSE (60S ribosomal protein L18 OS=Mus musculus GN=Rpl18 PE=2 SV=3) HSP 1 Score: 234.187 bits (596), Expect = 3.858e-61 Identity = 119/176 (67.61%), Postives = 140/176 (79.55%), Query Frame = 2 Query: 2 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 523 MG+D + K +K +R PKS DIYL+LLVKLYRFL RRT+S FN+V+LKRLFMS+ N+PPLSLSR+I MK G+E+K AVVVGTVTDD+R EVP LKV ALR + AR+RI KAGG+ LTFDQLAL +P G+ TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFE Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
BLAST of CV884588 vs. ExPASy Swiss-Prot
Match: RL18_RAT (60S ribosomal protein L18 OS=Rattus norvegicus GN=Rpl18 PE=2 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 5.039e-61 Identity = 118/176 (67.05%), Postives = 140/176 (79.55%), Query Frame = 2 Query: 2 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 523 MG+D + K +K +R PKS DIYL+LLVKLYRFL RRT+S FN+V+LKRLFMS+ N+PPLSLSR+I MK G+E+K AVVVGT+TDD+R EVP LKV ALR + AR+RI KAGG+ LTFDQLAL +P G+ TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFE Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
BLAST of CV884588 vs. ExPASy Swiss-Prot
Match: RL18_IXOSC (60S ribosomal protein L18 OS=Ixodes scapularis GN=RpL18 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 6.581e-61 Identity = 116/176 (65.91%), Postives = 146/176 (82.95%), Query Frame = 2 Query: 2 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 523 MGID + +K R PKS+++YL LLVK+YRFL RR+ + FN+++LKRLFMS++NKP +SL+R+ FMK G+E+ IAVVVGTVTDD+R Y+VP L++ ALR TE ARARI KAGGE LTFDQLA++AP G+ TVL++GP+N+REA +HFGPAPGVPHSHTKPYVRSKGRKFE Sbjct: 1 MGID-INHKYDRKVVRRRPKSENVYLGLLVKVYRFLARRSGAKFNRIVLKRLFMSRINKPVISLARVTRFMKKPGRENLIAVVVGTVTDDLRLYDVPKLRLCALRVTERARARILKAGGEILTFDQLAVQAPKGKGTVLMQGPRNSREACRHFGPAPGVPHSHTKPYVRSKGRKFE 175
BLAST of CV884588 vs. ExPASy Swiss-Prot
Match: RL18_MACFA (60S ribosomal protein L18 OS=Macaca fascicularis GN=RPL18 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.466e-60 Identity = 118/176 (67.05%), Postives = 139/176 (78.98%), Query Frame = 2 Query: 2 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 523 MG+D + K +K +R PKS DIYL+LLVKLYRFL RRT+S FN+V+LKRLFMS+ N+PPLSLSR+I MK G+E+K AVVVGT+TDD+R EVP LKV ALR T AR+RI +AGG+ LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFE Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175 The following BLAST results are available for this feature:
BLAST of CV884588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884588 ID=CV884588; Name=CV884588; organism=Citrus sinensis; type=EST; length=600bpback to top |