CV884557

Overview
NameCV884557
Unique NameCV884557
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3353 contig Csv1_Contig3353:1..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884557 vs. ExPASy Swiss-Prot
Match: MUB2_ARATH (Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana GN=MUB2 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.352e-41
Identity = 81/118 (68.64%), Postives = 100/118 (84.75%), Query Frame = -3
Query:  347 MASVQDQLEIKFRLTDGSDIGPKSFPAATSVATLKESVLSQWPKEKENGPRTVKDVKLISAGKILENNRTLGECRSPLCDIPGGVTTMHVVVQPPSTEKAEKKAASQP--KQNKCVCV 694
            MA V+DQLEIKFRL DGSDIGPK FP AT+VATLKE+V++QWP++KENGP+TVKDVKLISAG+ILENN+T+G+CRSP+ +  G VTTMHV++Q   TEK +KK   +   KQNKCVC+
Sbjct:    1 MAEVKDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRILENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCL 118          
BLAST of CV884557 vs. ExPASy Swiss-Prot
Match: MUB1_ARATH (Membrane-anchored ubiquitin-fold protein 1 OS=Arabidopsis thaliana GN=MUB1 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.192e-40
Identity = 78/118 (66.10%), Postives = 100/118 (84.75%), Query Frame = -3
Query:  341 MASVQDQLEIKFRLTDGSDIGPKSFPAATSVATLKESVLSQWPKEKENGPRTVKDVKLISAGKILENNRTLGECRSPLCDIPGGVTTMHVVVQPPSTEKAEKKAASQPKQNKCVCVIL 694
            MA V +QLEIKFRLTDGSDIGPK+FP AT+V+ LKE+V+S+WP+EKENGP+TVK+VKLISAGK+LEN++T+ + RSP+ ++ G VTTMHV++Q P TEK EKK    PK NKCVC ++
Sbjct:    1 MAEVHNQLEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKVLENSKTVKDYRSPVSNLAGAVTTMHVIIQAPVTEK-EKKPKGDPKMNKCVCSVM 117          
BLAST of CV884557 vs. ExPASy Swiss-Prot
Match: MUB1_ORYSJ (Membrane-anchored ubiquitin-fold protein 1 OS=Oryza sativa subsp. japonica GN=MUB1 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.234e-37
Identity = 74/116 (63.79%), Postives = 96/116 (82.76%), Query Frame = -3
Query:  341 VQDQLEIKFRLTDGSDIGPKSFPAATSVATLKESVLSQWPKEKENGPRTVKDVKLISAGKILENNRTLGECRSPLCDIPGGVTTMHVVVQPPSTEKAEKK-AASQPKQNKCVCVIL 685
            VQ+Q EIKFRL DG+DIGPK +PAA++VATLKES+++QWPK+KE GPRTV D+KLI+AGKILENN+TL EC+SP+CD   G+TTMHVVV+ P+++K   K  A +PK  +C C I+
Sbjct:    5 VQEQFEIKFRLPDGTDIGPKRYPAASTVATLKESIVAQWPKDKEKGPRTVNDLKLINAGKILENNKTLSECKSPICDF-SGLTTMHVVVRAPTSDKQSNKIVAKKPKDFRCGCSIM 119          
BLAST of CV884557 vs. ExPASy Swiss-Prot
Match: MUB3_ORYSJ (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica GN=MUB3 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.337e-34
Identity = 67/119 (56.30%), Postives = 94/119 (78.99%), Query Frame = -3
Query:  341 MASVQDQLEIKFRLTDGSDIGPKSFPAATSVATLKESVLSQWPKEKENGPRTVKDVKLISAGKILENNRTLGECRSPLCDIPGGVTTMHVVVQPPSTEK-AEKKAASQPKQNKCVCVIL 694
            MA  ++ +E+KFRL DG+DIGP  +  +T+V+ LKE +L++WP++KE  P+TV D+KLI+AG+ILENNRTL E R P+ ++PGGV TMHVVV+PP  +K +EK+ A+ PKQN+C C IL
Sbjct:    1 MAGGKEPIEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQDKEITPKTVNDLKLINAGRILENNRTLAESRVPVGEVPGGVITMHVVVRPPQPDKNSEKQLANSPKQNRCGCTIL 119          
BLAST of CV884557 vs. ExPASy Swiss-Prot
Match: MUB6_ARATH (Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana GN=MUB6 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.408e-33
Identity = 65/119 (54.62%), Postives = 92/119 (77.31%), Query Frame = -3
Query:  341 MASVQDQLEIKFRLTDGSDIGPKSFPAATSVATLKESVLSQWPKEKENGPRTVKDVKLISAGKILENNRTLGECRSPLCDIPGGVTTMHVVVQPPSTE-KAEKKAASQPKQNKCVCVIL 694
            MA  +D +E+KFRL DG+DIGP  +  + +V++LKE ++SQWPK+KEN P+TV D+KLI+AGKILENNRTL E R P+C++PG + TMH+V++ P+ + K+EK     P +N+CVC IL
Sbjct:    1 MAGEEDWIELKFRLADGTDIGPSKYNQSMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIITMHIVLRLPTLDKKSEKLQNDPPMKNRCVCTIL 119          
BLAST of CV884557 vs. ExPASy Swiss-Prot
Match: MUB5_ARATH (Membrane-anchored ubiquitin-fold protein 5 OS=Arabidopsis thaliana GN=MUB5 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.755e-29
Identity = 61/117 (52.14%), Postives = 88/117 (75.21%), Query Frame = -3
Query:  341 QDQLEIKFRLTDGSDIGPKSFPAATSVATLKESVLSQWPKEKENGPRTVKDVKLISAGKILENNRTLGECRS--PLCDIPGGVTTMHVVVQPPSTEKAEKKAASQ-PKQNKCVCVIL 682
            +D +E+KFRL DG+DIGP  +    +VA+LKE +++QWPK+KEN P+ + +VKLI+ GKILENN+TL E RS   + ++PG VTTMHVV++PP  EK ++K  +  P+++ CVC IL
Sbjct:    4 EDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLINGGKILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEKKKEKLQNDPPRKSHCVCCIL 120          
BLAST of CV884557 vs. ExPASy Swiss-Prot
Match: MUB3_ARATH (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana GN=MUB3 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.196e-28
Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = -3
Query:  341 QDQLEIKFRLTDGSDIGPKSFPAATSVATLKESVLSQWPKEKENGPRTVKDVKLISAGKILENNRTLGECRSPLCDIPGGVTTMHVVVQPP-STEKAEKKAASQPKQNKCVCVIL 682
            ++ ++IKFRL DGSDIGP  + AA++V  LK+ V+S WPK K   P+ + +VKLIS+GKILENN+T+G+C++P  DI GGV  MHVVVQP  +  K EKK    PK   C C IL
Sbjct:    4 EESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISSGKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKTEKKVDKAPKAVICTCTIL 118          
BLAST of CV884557 vs. ExPASy Swiss-Prot
Match: MUB4_ORYSJ (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica GN=MUB4 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.975e-27
Identity = 62/119 (52.10%), Postives = 81/119 (68.07%), Query Frame = -3
Query:  341 ASVQDQLEIKFRLTDGSDIGPKSFPA-ATSVATLKESVLSQWPKEKENGPRTVKDVKLISAGKILENNRTLGECRSPLCDIPGGVTTMHVVVQPPSTE-KAEKKAASQPKQNKCVCVIL 691
            A   +++E+KFRL DGSDIGP    A AT+VA LK+ V++ WPK+K   P+T  DVKLIS GKILEN++ + +CR+P  D+P    TMHVVVQP S + K +KK    PK  +C C IL
Sbjct:   17 AEADEEVEVKFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKDKTIVPKTANDVKLISGGKILENDKNIAQCRAPFGDLPSTAITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 135          
BLAST of CV884557 vs. ExPASy Swiss-Prot
Match: MUB4_ARATH (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana GN=MUB4 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.414e-25
Identity = 54/117 (46.15%), Postives = 83/117 (70.94%), Query Frame = -3
Query:  341 QDQLEIKFRLTDGSDIGPKSFPAATSVATLKESVLSQWPKEKENGPRTVKDVKLISAGKILENNRTLGECRSPLCDIPGGVTTMHVVVQ-PPSTEKAEKKAASQ--PKQNKCVCVIL 682
            +D +E+KFRL DGSD+GP  +    +V+ LKE ++S+WPK+K+  P++  D+KLI+AGKILEN +T+ +C++P  D+P  V TMHVVVQ  P+  + EKK   +  P+++ C C I+
Sbjct:    4 EDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINAGKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKARPEKKIEKEEAPQRSFCSCTIM 120          
BLAST of CV884557 vs. ExPASy Swiss-Prot
Match: MUB2_ORYSJ (Membrane-anchored ubiquitin-fold protein 2 OS=Oryza sativa subsp. japonica GN=MUB2 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.951e-23
Identity = 57/115 (49.57%), Postives = 76/115 (66.09%), Query Frame = -3
Query:  341 DQLEIKFRLTDGSDIGPKSFPAATSVATLKESVLSQWPKEKENGPRTVKDVKLISAGKILENNRTLGECRSPLCDIPGGVTTMHVVVQPPSTEKAEKK--AASQPKQNKCVCVIL 679
            + +E++FRL DGSDIGP     AT+V  LKE VL++WP+ KE  PRTV DV +I+AG++LENNRTL E R+   + P G  TMHVVV+    E+  K+   A  P++  C C IL
Sbjct:   12 EAVEVRFRLDDGSDIGPSMHDQATTVTALKEFVLARWPQGKEIAPRTVNDVTIINAGQVLENNRTLAESRNLAAESPEGPITMHVVVRRSRPERRVKQPPKARPPERIGCGCTIL 126          
The following BLAST results are available for this feature:
BLAST of CV884557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MUB2_ARATH5.352e-4168.64Membrane-anchored ubiquitin-fold protein 2 OS=Arab... [more]
MUB1_ARATH1.192e-4066.10Membrane-anchored ubiquitin-fold protein 1 OS=Arab... [more]
MUB1_ORYSJ1.234e-3763.79Membrane-anchored ubiquitin-fold protein 1 OS=Oryz... [more]
MUB3_ORYSJ6.337e-3456.30Membrane-anchored ubiquitin-fold protein 3 OS=Oryz... [more]
MUB6_ARATH2.408e-3354.62Membrane-anchored ubiquitin-fold protein 6 OS=Arab... [more]
MUB5_ARATH2.755e-2952.14Membrane-anchored ubiquitin-fold protein 5 OS=Arab... [more]
MUB3_ARATH5.196e-2853.91Membrane-anchored ubiquitin-fold protein 3 OS=Arab... [more]
MUB4_ORYSJ1.975e-2752.10Membrane-anchored ubiquitin-fold protein 4 OS=Oryz... [more]
MUB4_ARATH2.414e-2546.15Membrane-anchored ubiquitin-fold protein 4 OS=Arab... [more]
MUB2_ORYSJ2.951e-2349.57Membrane-anchored ubiquitin-fold protein 2 OS=Oryz... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008C01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884557 ID=CV884557; Name=CV884557; organism=Citrus sinensis; type=EST; length=906bp
TTTTTTTTTTTTTTTTTACCACCAACCTGGATTTGCATTAAGATCAAGTT
CATCTTGACAAGCCAAAAAGAAAAAAATAAACAATCATCTTGAAAGATTC
TAGAATATTGAATCTGAGATATAGTTGCTTAATCTCAACATAACAACATA
CATACAGTATACCAAATGCTGTGAATGCAACAGCTATGTTAAGAGAACAC
AATAAAACTTCAAAAAACAAGACCTATGTGCTTAATGCGACTGTCTCTCA
TCTATGGCAATTCACCAACTCAATCCTCTATAACAGTTCCACCGTCATTT
ATCTGCGAATGATGTCTTCCACCCTCTTAATCGCAAATTATAATATAACA
CAAACACATTTGTTCTGCTTTGGTTGACTAGCTGCTTTCTTTTCTGCTTT
TTCTGTAGAAGGAGGTTGAACAACAACATGCATGGTTGTAACTCCACCAG
GGATATCACATAGCGGACTCCGGCACTCTCCCAATGTTCTATTGTTCTCC
AATATTTTTCCGGCACTTATTAACTTTACATCTTTCACTGTCCTTGGACC
ATTCTCTTTCTCTTTAGGCCATTGAGAAAGAACGCTTTCTTTCAAGGTTG
CAACACTTGTAGCAGCAGGAAAGCTCTTGGGACCAATATCCGATCCATCG
GTCAATCGGAACTTGATCTCTAACTGATCTTGCACACTTGCCATTCTAAA
GCTTTCTGATTGACTCCAAGGACCTCAAAGACTTTAAAATTCCAATCTCA
GAGATCTTCACTGAAGCCTTCTACCAAAGTATACGTCAATCCTCAATAGG
TTTACTTTTGAGCAATCAAAAACCCACCAGAATACGCAGAAAGTTGCAGA
TTGATCAATATTCTCACTTTGGTGCGCTCAAAAACTGATCCGGTCACTCC
CTTTTT
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