EY665294

Overview
NameEY665294
Unique NameEY665294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length974
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665294 vs. ExPASy Swiss-Prot
Match: SPA2_ARATH (Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2)

HSP 1 Score: 329.331 bits (843), Expect = 2.021e-89
Identity = 152/195 (77.95%), Postives = 172/195 (88.21%), Query Frame = 2
Query:    2 DCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSKSNEVYAYHRSLPMPITSYKFGSLDPISGKKTDEDNGLFVFSGGWKRKSNRVVAAKFQGGVK 586
            DCSVKLWNINE+N L TI+NIANVCCVQFS  SSHLLAFGS+D+RTYCYDLRN R PWC+L+GH KAVSY KFLD+ TLVTASTDN LKLWDLK+T+H G STNACSLTF GHTNEKNFVGLST+DGYIACGS++NEVYAYHRSLPMPITSYKFGS+DPISGK+ +EDN LFV S  W+++SN VV+A   G +K
Sbjct:  837 DCSVKLWNINERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLSTSDGYIACGSETNEVYAYHRSLPMPITSYKFGSIDPISGKEIEEDNNLFVSSVCWRKRSNMVVSASSNGSIK 1031          
BLAST of EY665294 vs. ExPASy Swiss-Prot
Match: SPA1_ARATH (Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.738e-78
Identity = 135/195 (69.23%), Postives = 164/195 (84.10%), Query Frame = 2
Query:    2 DCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSKSNEVYAYHRSLPMPITSYKFGSLDPISGKKTDEDNGLFVFSGGWKRKSNRVVAAKFQGGVK 586
            DCSVKLW+INEK SL TI + ANVCCVQFS++S+HLLAFGSADY+ YCYDLR  + PWC LAGHEKAVSYVKF+DS T+V+ASTDN LKLW+L +T+ +G S  ACSLT+ GHTN+KNFVGLS  DGYIACGS++NEVY+Y++SLPMP+TSYKFGS+DPISG +  +DNG FV S  W++KSN +VAA   G +K
Sbjct:  830 DCSVKLWSINEKRSLGTIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIACGSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWRKKSNMLVAANSTGNMK 1024          
BLAST of EY665294 vs. ExPASy Swiss-Prot
Match: SPA4_ARATH (Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.334e-53
Identity = 105/196 (53.57%), Postives = 138/196 (70.41%), Query Frame = 2
Query:    2 DCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSL-TFSGHTNEKNFVGLSTADGYIACGSKSNEVYAYHRSLPMPITSYKFGSLDPISGKKTDEDNGLFVFSGGWKRKSNRVVAAKFQGGVK 586
            D SVKLW+IN+  S+ TIK  AN+CCVQF + +   LAFGSAD++ Y YDLRN + P C + GH K VSYV+F+DS TLV++STDN LKLWDL   S +    N   L +F GHTN KNFVGLS +DGYIA GS++NEV+ YH++ PMP+ SYKF ++DP+S  + D D   F+ S  W+ +S+ +VAA   G +K
Sbjct:  598 DGSVKLWSINQGVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDL---SMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVD-DASQFISSVCWRGQSSTLVAANSTGNIK 789          
BLAST of EY665294 vs. ExPASy Swiss-Prot
Match: SPA3_ARATH (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 3.049e-53
Identity = 106/196 (54.08%), Postives = 137/196 (69.90%), Query Frame = 2
Query:    2 DCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSL-TFSGHTNEKNFVGLSTADGYIACGSKSNEVYAYHRSLPMPITSYKFGSLDPISGKKTDEDNGLFVFSGGWKRKSNRVVAAKFQGGVK 586
            D +VKLW+IN+  S+ TIK  ANVCCVQF + S   LAFGSAD++ Y YDLRN + P C + GH K VSYVKF+DS TLV++STDN LKLWDL   S +    N   L +F+GHTN KNFVGLS +DGYIA GS++NEV+ YH++ PMP+ SY F + D +SG + D D   F+ S  W+ +S+ +VAA   G +K
Sbjct:  648 DGTVKLWSINQGVSIGTIKTKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDL---SMSASGINESPLHSFTGHTNLKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVD-DASQFISSICWRGQSSTLVAANSNGNIK 839          
BLAST of EY665294 vs. ExPASy Swiss-Prot
Match: COP1_ARATH (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 1.419e-42
Identity = 88/195 (45.13%), Postives = 122/195 (62.56%), Query Frame = 2
Query:    2 DCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSKSNEVYAYHRSLPMPITSYKFGSLDPISGKKTDEDNGLFVFSGGWKRKSNRVVAAKFQGGVK 586
            DC VK+W   ++ S+  I   AN+CCV+++  SS+ +A GSAD+  + YDLRN   P  V +GH+KAVSYVKFL +  L +ASTD+ L+LWD+K         N    TF GHTNEKNFVGL+    Y+ACGS++NEVY YH+ +  P+TS++FGS  P      +E    F+ +  WK  S  ++ A  QG +K
Sbjct:  485 DCKVKVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVK--------DNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRFGS--PDMDDAEEEAGSYFISAVCWKSDSPTMLTANSQGTIK 669          
BLAST of EY665294 vs. ExPASy Swiss-Prot
Match: COP1_PEA (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.202e-41
Identity = 86/195 (44.10%), Postives = 121/195 (62.05%), Query Frame = 2
Query:    2 DCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSKSNEVYAYHRSLPMPITSYKFGSLDPISGKKTDEDNGLFVFSGGWKRKSNRVVAAKFQGGVK 586
            DC VK+W  N++ S+  I   AN+CCV+++  S + +A GSAD+  + YDLRN   P  V  GH+KAVSYVKFL +  L +ASTD+ L+LWD+K+        N    TF GH NEKNFVGL+    YIACGS++NEV+ YH+ +  P+T ++FG+LD    +  DE    F+ +  WK     ++ A  QG +K
Sbjct:  482 DCKVKVWCTNQEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISRPVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQ--------NLPVRTFRGHANEKNFVGLTVRSEYIACGSETNEVFVYHKEISKPLTWHRFGTLDMEDAE--DEAGSYFISAVCWKSDRPTILTANSQGTIK 666          
BLAST of EY665294 vs. ExPASy Swiss-Prot
Match: RFWD2_MOUSE (E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 1.125e-39
Identity = 86/200 (43.00%), Postives = 126/200 (63.00%), Query Frame = 2
Query:    2 DCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSKSNEVYAYHRSLPMPITSYKFGSLDPISGK-KTDEDNGLFVFSGGWKR----KSNRVVAAKFQGGVK 586
            D  VKLW+ N  NS+A+I+  ANVCCV+FS  S + LAFG AD+  + YDLRN + P  V  GH KAVSY KF+    +V+ASTD++LKLW++ +          C  +F GH NEKNFVGL++   YIACGS++N +Y Y++ L   + ++KF ++  +  K + ++D   FV +  W+     +SN ++AA  QG +K
Sbjct:  537 DAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKP--------YCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESNVLIAANSQGTIK 728          
BLAST of EY665294 vs. ExPASy Swiss-Prot
Match: RFWD2_HUMAN (E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.125e-39
Identity = 86/200 (43.00%), Postives = 126/200 (63.00%), Query Frame = 2
Query:    2 DCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSKSNEVYAYHRSLPMPITSYKFGSLDPISGK-KTDEDNGLFVFSGGWKR----KSNRVVAAKFQGGVK 586
            D  VKLW+ N  NS+A+I+  ANVCCV+FS  S + LAFG AD+  + YDLRN + P  V  GH KAVSY KF+    +V+ASTD++LKLW++ +          C  +F GH NEKNFVGL++   YIACGS++N +Y Y++ L   + ++KF ++  +  K + ++D   FV +  W+     +SN ++AA  QG +K
Sbjct:  535 DAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKP--------YCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIK 726          
The following BLAST results are available for this feature:
BLAST of EY665294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
SPA2_ARATH2.021e-8977.95Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=... [more]
SPA1_ARATH2.738e-7869.23Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis th... [more]
SPA4_ARATH2.334e-5353.57Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=... [more]
SPA3_ARATH3.049e-5354.08Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=... [more]
COP1_ARATH1.419e-4245.13E3 ubiquitin-protein ligase COP1 OS=Arabidopsis th... [more]
COP1_PEA1.202e-4144.10E3 ubiquitin-protein ligase COP1 OS=Pisum sativum ... [more]
RFWD2_MOUSE1.125e-3943.00E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus ... [more]
RFWD2_HUMAN1.125e-3943.00E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665294 ID=EY665294; Name=EY665294; organism=Citrus sinensis; type=EST; length=974bp
CGATTGTTCAGTTAAGCTGTGGAACATTAATGAGAAAAACAGTTTAGCTA
CAATCAAGAACATTGCAAATGTCTGCTGTGTCCAGTTCTCTGCTCACTCA
TCTCATTTGCTGGCCTTTGGTTCTGCGGATTACAGAACATATTGCTATGA
TCTTCGGAATGCCAGAGCTCCCTGGTGTGTATTGGCTGGCCATGAAAAAG
CTGTGAGCTATGTCAAATTCTTGGATTCTGGAACTCTTGTTACTGCATCC
ACCGATAATAAATTGAAGCTTTGGGATCTCAAAAGAACCAGTCACACTGG
GCCATCTACCAATGCTTGCTCCTTAACCTTTAGTGGGCATACCAACGAGA
AGAACTTCGTGGGGTTGTCTACTGCTGATGGTTATATAGCATGTGGTTCA
AAATCGAATGAGGTTTATGCGTACCATAGGTCTCTGCCCATGCCAATCAC
TTCCTACAAGTTTGGCTCCCTTGACCCTATTTCCGGTAAAAAAACTGACG
AAGACAACGGTCTGTTTGTTTTCAGTGGCGGTTGGAAACGGAAATCAAAC
AGGGTTGTTGCGGCCAAATTTCAGGGGGGTGTAAAAAAGGGCCGGAAAAG
GTTTAATTTTGGGTTGAGCCCCCCAAAACCAAATAAAAAAAAAAACTGGC
CTTCGGGCTTCTGGGAAATTTGAGCCTTTGTGTCTTTCCCTTACGCGAAA
ACCAAAAGAATTTGGGGCCACCCAAAACCCCCAAGGGGCCCAAAAAAATG
TTTGGGGTTTGGGGCAAAGGTTTTTGAAAAGGAAAATTTCCGAGGAGCCA
AAAAAGAGCTTTCTCGTGCCCGCCTATTTTACCCTTTTTGGCCGCGGGAT
GAAGGCCTCCGGGGGCAGGGGAAAATATGCTACAGCGGGATCCCCCGAAA
TAATTTTTTATTTTTGCTGTGGTGGAATCTCACCCCCCCCCCAAAAAAAG
AAGACGACAGACACTAATAGACGA
back to top