CV884544

Overview
NameCV884544
Unique NameCV884544
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:307..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884544 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 328.946 bits (842), Expect = 7.415e-90
Identity = 153/162 (94.44%), Postives = 157/162 (96.91%), Query Frame = 2
Query:    8 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 493
            IKIL+TALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ GDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG G+MMNDRKSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APLDKVCLLGCGVPTGLGAVWNTAKVEPGS VA+
Sbjct:   39 IKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAI 200          
BLAST of CV884544 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 1.265e-89
Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 2
Query:    8 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 493
            +KILFTALCHTD YTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV TGLGAVWNTAKVE GSIVA+
Sbjct:   41 VKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAI 202          
BLAST of CV884544 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 1.265e-89
Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 2
Query:    8 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 493
            +KILFTALCHTD YTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV TGLGAVWNTAKVE GSIVA+
Sbjct:   41 VKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAI 202          
BLAST of CV884544 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 4.806e-89
Identity = 151/162 (93.21%), Postives = 157/162 (96.91%), Query Frame = 2
Query:    8 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 493
            +KILFTALCHTD YTWSGKDPEGLFPCILGHEAAGIVESVGEGVT+VQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG GVMMND KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTGLGAVWNTAKVE GS+VAV
Sbjct:   41 VKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVESGSVVAV 202          
BLAST of CV884544 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 1.355e-83
Identity = 146/162 (90.12%), Postives = 151/162 (93.21%), Query Frame = 2
Query:    8 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 493
            I+ILFTALCHTDAYT  GKDPEGLFPCILGHEAAGIVESVGEGVT+V+PGDHVIP YQAEC ECKFCKS KTNLCGKVR ATG GVMM DRKSRFS+ GKPIYHFMGTSTFSQYTVVHDVSVAKI P APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVA+
Sbjct:   38 IQILFTALCHTDAYTLGGKDPEGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAI 199          
BLAST of CV884544 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 7.232e-61
Identity = 115/162 (70.99%), Postives = 128/162 (79.01%), Query Frame = 2
Query:    8 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 493
            IKI+ TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +M D  SRF+  GKPI HFMGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA  NTAKVEPGS  AV
Sbjct:   37 IKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAV 197          
BLAST of CV884544 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 231.491 bits (589), Expect = 1.611e-60
Identity = 114/162 (70.37%), Postives = 128/162 (79.01%), Query Frame = 2
Query:    8 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 493
            IKIL TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +M D  SRF+  GK ++HFMGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA  NTAKVEPGS  AV
Sbjct:   37 IKILATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAV 197          
BLAST of CV884544 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 6.123e-60
Identity = 111/163 (68.10%), Postives = 128/163 (78.53%), Query Frame = 2
Query:    5 LIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 493
            L+KI  T +CHTDAYT SG DPEGLFP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC FC SGKTNLC  VR   G GV M D  SRF +NG+P+YH+MG STFS+YTVV +VS+AKI+PQA  ++VCLLGCGV TG+GAV NTAKV+ G  VAV
Sbjct:   31 LVKISHTGVCHTDAYTLSGDDPEGLFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECDFCTSGKTNLCVAVRETQGKGV-MPDATSRFFVNGQPLYHYMGCSTFSEYTVVAEVSLAKINPQANAEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAV 192          
BLAST of CV884544 vs. ExPASy Swiss-Prot
Match: FRMA_SHISS (S-(hydroxymethyl)glutathione dehydrogenase OS=Shigella sonnei (strain Ss046) GN=frmA PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.781e-59
Identity = 108/163 (66.26%), Postives = 130/163 (79.75%), Query Frame = 2
Query:    5 LIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 493
            LIK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC+FC+SGKTNLC  VR   G G +M D  +RFS NG+P+YH+MG STFS+YTVV +VS+AKI+P+A  + VCLLGCGV TG+GAV NTAKV+PG  VAV
Sbjct:   31 LIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAV 192          
BLAST of CV884544 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.781e-59
Identity = 108/163 (66.26%), Postives = 130/163 (79.75%), Query Frame = 2
Query:    5 LIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 493
            LIK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC+FC+SGKTNLC  VR   G G +M D  +RFS NG+P+YH+MG STFS+YTVV +VS+AKI+P+A  + VCLLGCGV TG+GAV NTAKV+PG  VAV
Sbjct:   31 LIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAV 192          
The following BLAST results are available for this feature:
BLAST of CV884544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
ADHX_ARATH7.415e-9094.44Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_ORYSJ1.265e-8995.06Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI1.265e-8995.06Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_MAIZE4.806e-8993.21Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_PEA1.355e-8390.12Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_RAT7.232e-6170.99Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_MOUSE1.611e-6070.37Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
FRMA_PASPI6.123e-6068.10S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
FRMA_SHISS1.781e-5966.26S-(hydroxymethyl)glutathione dehydrogenase OS=Shig... [more]
FRMA_ECOUT1.781e-5966.26S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008B05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884544 ID=CV884544; Name=CV884544; organism=Citrus sinensis; type=EST; length=495bp
GCGGTTAATCAAGATTCTCTTCACTGCTCTCTGCCACACTGATGCTTACA
CCTGGAGCGGCAAGGATCCTGAAGGTCTCTTCCCTTGTATCCTAGGTCAT
GAGGCTGCTGGGATTGTGGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCA
ACCAGGTGATCATGTCATCCCTTGTTACCAGGCAGAATGCCGAGAGTGCA
AGTTTTGCAAGTCTGGAAAGACTAACCTCTGTGGTAAGGTTAGGGGTGCC
ACTGGTGCTGGTGTCATGATGAATGACCGCAAGAGCCGTTTCTCGATAAA
TGGAAAGCCTATCTATCACTTCATGGGAACCTCAACATTTAGCCAGTACA
CAGTTGTGCATGATGTTAGTGTTGCAAAGATTGACCCACAAGCTCCTTTG
GACAAAGTATGCCTTCTTGGCTGTGGTGTTCCTACTGGTCTTGGAGCAGT
TTGGAACACTGCAAAAGTAGAGCCGGGTTCTATAGTTGCTGTTTT
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