CV884504

Overview
NameCV884504
Unique NameCV884504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1283 contig Csv1_Contig1283:147..773. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884504 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.806e-43
Identity = 97/153 (63.40%), Postives = 104/153 (67.97%), Query Frame = -3
Query:  146 MSLIPSIFGNR--SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 580
            MSLIPS FG R  SVFDPFS DVW P        S S E S F S +VDWKET EAHVFKAD+PGL         +DGRVLQISGER+VEKEDKND WHRVER  GK VRRFRLPENAK+DQVKASMENGVL              K+I I+G
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153          
BLAST of CV884504 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.171e-42
Identity = 98/154 (63.64%), Postives = 110/154 (71.43%), Query Frame = -3
Query:  146 MSLIPSIFGNR---SVFDPFSSDVWAP---LG---SSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 580
            MSLIP IFG+R   SVFDPFS DV+ P   LG   S+S E S FA+ ++DWKET EAHVFKADLPGL         E+ RVLQISGER+VEKEDKND WHRVER  GKF+RRFRLPENAK+DQVKASMENGVL              KSI+I+G
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154          
BLAST of CV884504 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.406e-42
Identity = 94/154 (61.04%), Postives = 109/154 (70.78%), Query Frame = -3
Query:  146 MSLIPSIFGNR---SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 580
            MSLIP IFG+R   S+FDPFS DV+ P       G++S E S FA+ ++DWKET EAHVFKADLPGL         E+ RVLQISGER++EKEDKNDKW RVER  GKF+RRFRLPENAK+DQVKASMENGVL              KSI+I+G
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKPDVKSIEISG 154          
BLAST of CV884504 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.294e-41
Identity = 96/158 (60.76%), Postives = 104/158 (65.82%), Query Frame = -3
Query:  146 MSLIPSIFGNR--SVFDPFSSDVWAPL-----------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 580
            MSLIPS F  R  +VFDPFS DVW PL            S   E   F S +VDWKET EAHVFKADLPGL         ED RVLQISGERSVEKEDKND+WHRVER  GKF+RRFRLPENAK+D+VKASMENGVL              KSI+I+G
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158          
BLAST of CV884504 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.208e-41
Identity = 94/158 (59.49%), Postives = 104/158 (65.82%), Query Frame = -3
Query:  146 MSLIPSIFGNR--SVFDPFSSDVWAPL-----------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 580
            MSLIPS FG R  +VFDPFS DVW P             S   E S F S +VDWKET EAHVFKADLPG+         ED RVLQISGERSVEKEDKND+WHR+ER  GKF+RRFRLPENAK+DQVKA+MENGVL              K+I I+G
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158          
BLAST of CV884504 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.766e-41
Identity = 92/154 (59.74%), Postives = 107/154 (69.48%), Query Frame = -3
Query:  146 MSLIPSIFGNR---SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 580
            MSLIP IFG+R   S+FDPFS DV+ P        ++S E S FA+ ++DWKET E HVFK DLPGL         E+ RVLQISGER+VEKEDKNDKWHR+ER  GKF+RRFRLPENAK+DQVKASMENGVL              KSI+I+G
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPEVKSIEISG 154          
BLAST of CV884504 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.918e-41
Identity = 92/154 (59.74%), Postives = 103/154 (66.88%), Query Frame = -3
Query:  146 MSLIPSIFGNR--SVFDPFSSDVW-------APLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 580
            MSLIP  FG R  +VFDPFS D+W        P  S S E S F S +VDWKET EAHVFKAD+PGL         ED RVLQISGER+VEKEDKND WHRVER  GKF RRFRLPENAK+++VKASMENGVL              K+I+I+G
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154          
BLAST of CV884504 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.423e-41
Identity = 92/153 (60.13%), Postives = 105/153 (68.63%), Query Frame = -3
Query:  146 MSLIPSIFGNR--SVFDPFSSDVWAPLG------SSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 580
            MSLIPSIFG R  +VFDPFS DVW P        S S E S F + +VDWKET EAHVF+AD+PGL         ED RVLQISGER++EKEDKND WHRVER  G F+RRFRLPENAK++QVKASMENGVL              K+I+I+G
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153          
BLAST of CV884504 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.389e-41
Identity = 92/161 (57.14%), Postives = 107/161 (66.46%), Query Frame = -3
Query:  140 MSLIPSIFGNR--SVFDPFSSDVWAPL------------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG*N 580
            MSLIPSIFG R  +VFDPFS D+W P              S++ +V+ F +A+VDWKET EAHVFKADLPGL         ED  VLQISGERS E E+KNDKWHRVER  GKF+RRFRLPENAK+++VKA+MENGVL              KSI I+G N
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISGAN 161          
BLAST of CV884504 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.431e-40
Identity = 94/161 (58.39%), Postives = 107/161 (66.46%), Query Frame = -3
Query:  146 MSLIPSIFGNR--SVFDPFSSDVWAP---------LGSSS-----NEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 580
            MSLIP+ FG R  +VFDPFS DVW P         L S+S      E S F S +VDWKET EAHVFKAD+PGL         ED +VLQISGER+VEKEDKND WHRVER  GKF+RRFRLPENAK++QVKASMENGVL              K+I+I+G
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161          
The following BLAST results are available for this feature:
BLAST of CV884504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
HSP11_SOYBN1.806e-4363.4017.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_SOLPE1.171e-4263.6417.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_SOLPE3.406e-4261.0417.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_PEA1.294e-4160.7618.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP12_MEDSA2.208e-4159.4918.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP11_SOLLC3.766e-4159.7417.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HSP14_SOYBN4.918e-4159.7417.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP13_SOYBN6.423e-4160.1317.5 kDa class I heat shock protein OS=Glycine max... [more]
HS181_ARATH8.389e-4157.1418.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP16_SOYBN1.431e-4058.3918.5 kDa class I heat shock protein OS=Glycine max... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003H05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884504 ID=CV884504; Name=CV884504; organism=Citrus sinensis; type=EST; length=633bp
ATTTTTATTACTTAAAAAAGCAGTCGACAACACATTACATGAACAAAAGT
ATGCGACACACTTAACAGCAATCGCACATCGTTCATTAACACACAGAACA
AAACAAGAACCAAATTAAAAAGGCTGCAATTAACGGAGAGTTTCAACCAG
TGATCTGAATGGATTTGACCTCAGGCTTCTTCTCCTCCACTTTGGGAACA
GTGACGGTGAGGACACCATTCTCCATTGATGCCTTAACTTGATCGATCTT
GGCATTCTCAGGCAACCGGAACCTCCTCACGAACTTGCCGCGGCCCCTCT
CAACACGGTGCCATTTGTCGTTCTTGTCTTCCTTCTCGACGCTCCTCTCA
CCGCTGATCTGAAGGACTCTCCCGTCCTCAACTTCAACCTTCACTTCCTC
TTTCTTGAGCCCCGGAAGATCCGCCTTGAAAACATGAGCTTCCCGGGTTT
CTTTCCAATCGACTTGAGCACTGGCGAATGTTGACACCTCGTTGCTGGAG
GAGCCAAGGGGCGCCCAGACGTCCGAGGAAAATGGGTCGAACACGCTCCT
GTTTCCGAATATAGATGGAATCAAAGACATTTTTGCTTAATCAAAGCGAC
GAGCACTTTCTTCGAAAGCGTTTGCTTATTTAT
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