CV884501

Overview
NameCV884501
Unique NameCV884501
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length746
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884501 vs. ExPASy Swiss-Prot
Match: PP1R7_RAT (Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus GN=Ppp1r7 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.112e-22
Identity = 54/135 (40.00%), Postives = 87/135 (64.44%), Query Frame = -1
Query:  339 KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLEVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKFSNYFATLRQIFPNIQQID 743
            K+ NL  L  +  +S+QSNRLT ++G +  + L ELYLSHNGI  +EGL     L +L+++SN++  +++I +L+ L++ W+NDN +ES   + E + G+R +L T+YLE NP  K   Y   +    P+++QID
Sbjct:  222 KLQNLDALSNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDE-LKGAR-SLETVYLERNPLQKDPQYRRKVMLALPSVRQID 354          

HSP 2 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 37/130 (28.46%), Postives = 75/130 (57.69%), Query Frame = -1
Query:  360 KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLEVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKFSNY--FATLRQIF 743
            K+ NL  L  ++ + +  N L +++G ++   L++L+L +N I+K+E +STL  L +LE+ SN++  +++I  L+ LE L+L  N+I  L+++      +   LT + +++N   K         LR+++
Sbjct:  134 KIENLEALTELEVLDISFNLLRNIEGIDKLTQLKKLFLVNNKINKIENISTLQQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNL-----DALSNLTVLSMQSNRLTKIEGLQNLVNLRELY 258          
BLAST of CV884501 vs. ExPASy Swiss-Prot
Match: PP1R7_HUMAN (Protein phosphatase 1 regulatory subunit 7 OS=Homo sapiens GN=PPP1R7 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.065e-22
Identity = 54/135 (40.00%), Postives = 87/135 (64.44%), Query Frame = -1
Query:  339 KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLEVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKFSNYFATLRQIFPNIQQID 743
            K+ NL  L  +  +S+QSNRLT ++G +  + L ELYLSHNGI  +EGL     L +L+++SN++  +++I +L+ L++ W+NDN +ES   + E + G+R +L T+YLE NP  K   Y   +    P+++QID
Sbjct:  222 KLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDE-LKGAR-SLETVYLERNPLQKDPQYRRKVMLALPSVRQID 354          
BLAST of CV884501 vs. ExPASy Swiss-Prot
Match: PP1R7_DANRE (Protein phosphatase 1 regulatory subunit 7 OS=Danio rerio GN=ppp1r7 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.065e-22
Identity = 52/132 (39.39%), Postives = 83/132 (62.88%), Query Frame = -1
Query:  339 NLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLEVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKFSNYFATLRQIFPNIQQID 734
            NL GL  +  +S+QSNR+T ++G +  + L ELYLSHNGI  MEGL     L  L++++N++  +++I +L+ L++ W+NDNQIE+   + E    + + L T+YLE NP  K   Y   +    P+++QID
Sbjct:  210 NLDGLHNLTVLSIQSNRITKLEGLQNLVNLRELYLSHNGIEVMEGLENNKKLSTLDIAANRIKKIENISHLTDLKEFWMNDNQIENWADLDE--LKNAKGLETVYLERNPLQKDPQYRRKIMLALPSVRQID 339          
BLAST of CV884501 vs. ExPASy Swiss-Prot
Match: PP1R7_PONAB (Protein phosphatase 1 regulatory subunit 7 OS=Pongo abelii GN=PPP1R7 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.545e-21
Identity = 53/135 (39.26%), Postives = 87/135 (64.44%), Query Frame = -1
Query:  339 KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLEVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKFSNYFATLRQIFPNIQQID 743
            K+ NL  L  +  +S+QSNRLT ++G +  + L+ELYLSHNGI  +EGL     L +L+++SN++  +++I +L+  ++ W+NDN +ES   + E + G+R +L T+YLE NP  K   Y   +    P+++QID
Sbjct:  222 KLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLQELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTEPQEFWMNDNLLESWSDLDE-LKGAR-SLETVYLERNPLQKDPQYRRKVMLALPSVRQID 354          
BLAST of CV884501 vs. ExPASy Swiss-Prot
Match: PP1R7_BOVIN (Protein phosphatase 1 regulatory subunit 7 OS=Bos taurus GN=PPP1R7 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.666e-21
Identity = 50/135 (37.04%), Postives = 86/135 (63.70%), Query Frame = -1
Query:  339 KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLEVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKFSNYFATLRQIFPNIQQID 743
            K+ NL  L  +  +S+QSNRLT ++G +  + L ELYLSHNGI  +EGL     L +L+++SN++  ++++ +L+ L++ W+NDN ++    + E + G+R +L T+YLE NP  +   Y   +    P+++QID
Sbjct:  222 KLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLDNNNKLTMLDIASNRIKKIENVSHLTELQEFWMNDNLLDCWSDLDE-LKGAR-SLETVYLERNPLQRDPQYRRKIMLALPSVRQID 354          
BLAST of CV884501 vs. ExPASy Swiss-Prot
Match: PP1R7_MOUSE (Protein phosphatase 1 regulatory subunit 7 OS=Mus musculus GN=Ppp1r7 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.308e-20
Identity = 52/135 (38.52%), Postives = 86/135 (63.70%), Query Frame = -1
Query:  339 KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLEVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKFSNYFATLRQIFPNIQQID 743
            K+ NL  L  +  +S+QSNRL  ++G +  + L ELYLS+NGI  +EGL     L +L+++SN++  +++I +L+ L++ W+NDN +ES   + E + G+R +L T+YLE NP  K   Y   +    P+++QID
Sbjct:  223 KLQNLDALTNLTVLSVQSNRLAKIEGLQSLVNLRELYLSNNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDE-LKGAR-SLETVYLERNPLQKDPQYRRKVMLALPSVRQID 355          
BLAST of CV884501 vs. ExPASy Swiss-Prot
Match: PP1R7_XENTR (Protein phosphatase 1 regulatory subunit 7 OS=Xenopus tropicalis GN=ppp1r7 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.913e-20
Identity = 53/135 (39.26%), Postives = 87/135 (64.44%), Query Frame = -1
Query:  339 KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLEVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKFSNYFATLRQIFPNIQQID 743
            K+ NL  L  +  +S+QSNRLT ++G +  + L ELYLS NGI  +EGL     L  L+++SN++  +++I++LS L++ W+NDN +E+  S +E ++G+   L T+YLE NP  K + Y   +    P+++QID
Sbjct:  208 KLQNLETLTNLTVLSVQSNRLTKIEGLQNLVNLRELYLSDNGIQVIEGLENNNKLTTLDLASNRIKRIENIKHLSELQEFWMNDNLVENW-SDLEELSGA-PGLQTVYLERNPLQKDAQYRRKIMLALPSVRQID 340          
BLAST of CV884501 vs. ExPASy Swiss-Prot
Match: SDS22_YEAST (Protein phosphatase 1 regulatory subunit SDS22 OS=Saccharomyces cerevisiae GN=SDS22 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.107e-19
Identity = 58/139 (41.73%), Postives = 90/139 (64.75%), Query Frame = -1
Query:  339 KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLEVSSNKLTLVDDIQNLSRLEDLWLNDNQI-ESLESIVEAVAGSRETLTTIYLENNPCA---KFSNYFATLRQIFPNIQQID 743
            +++NL  LK +K +S+QSN+L  ++  EE   LEELYLSHN I+K+EGL   + L  L+V+SNK+T ++++ +LS L D+W + N+I +S ES+ E ++ +   L TIYLE NP     K S        + P++Q+ID
Sbjct:  195 RLINLHPLKNLKILSIQSNKLKKIENLEELTNLEELYLSHNFITKIEGLEKNLKLTTLDVTSNKITSLENLNHLSNLTDIWASFNKIDQSFESLGENLS-ALSRLETIYLEGNPIQLENKTSYRRKLTMNLPPSLQKID 332          

HSP 2 Score: 70.4774 bits (171), Expect = 1.109e-11
Identity = 43/139 (30.94%), Postives = 77/139 (55.40%), Query Frame = -1
Query:  339 KVVNLCGLKCIKKISLQSNRLTSMK--GFEECIALEELYLSHNGISKMEGLSTLVNLHVLEVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKFS--NYFATLRQIFPNIQQID 743
            K+ NL  LK +K + L  N++ S++   FE    LEE++L  N I ++  L  L NL +L + SNKL  +++++ L+ LE+L+L+ N I  +E + + +      LTT+ + +N        N+ + L  I+ +  +ID
Sbjct:  149 KIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIWLGKNSIPRLINLHPLKNLKILSIQSNKLKKIENLEELTNLEELYLSHNFITKIEGLEKNL-----KLTTLDVTSNKITSLENLNHLSNLTDIWASFNKID 282          
BLAST of CV884501 vs. ExPASy Swiss-Prot
Match: PP1R7_DICDI (Protein phosphatase 1 regulatory subunit pprA OS=Dictyostelium discoideum GN=pprA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.494e-19
Identity = 49/130 (37.69%), Postives = 80/130 (61.54%), Query Frame = -1
Query:  339 LKCIKKISLQSNRLTSM--KGFEECIALEELYLSHNGISKMEGLSTLVNLHVLEVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKFSNYFATLRQIFPNIQQID 722
            L  ++ +SLQSNRLT +  KG      LEELYLSHNGI+ ++GL +L  L  L++S+NK+  +  +  L  L+++W NDN ++S+++I + V    +++  +Y E NP A    Y      +FP ++Q+D
Sbjct:  203 LSHLRILSLQSNRLTEIGVKGLVGLNCLEELYLSHNGITDIDGLQSLKQLRTLDISANKIKTLVGLNELPDLDEIWCNDNLVDSMDNIEQQVT---KSIKCLYFERNPVATHVQYRRMFINMFPQLKQLD 329          
BLAST of CV884501 vs. ExPASy Swiss-Prot
Match: SDS22_SCHPO (Protein phosphatase 1 regulatory subunit SDS22 OS=Schizosaccharomyces pombe GN=sds22 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.697e-16
Identity = 47/139 (33.81%), Postives = 81/139 (58.27%), Query Frame = -1
Query:  339 KVVNLCGLKCIKKISLQSNRLTSMKGFEECIA--LEELYLSHNGISKMEGLSTLVNLHVLEVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKFSN--YFATLRQIFPNIQQID 743
            K  N   L+ +  +S+QSNR+T  +    C++  L ELY+SHNG++   G+  L NL +L+VS+N +  +  +  L  L +LW ++N++ S + I + ++G ++ L T+Y E NP  K +   Y   +R   P ++QID
Sbjct:  184 KFENFEKLQKLSLLSIQSNRITQFENLA-CLSHCLRELYVSHNGLTSFSGIEVLENLEILDVSNNMIKHLSYLAGLKNLVELWASNNELSSFQEIEDELSGLKK-LETVYFEGNPLQKTNPAVYRNKVRLCLPQLRQID 320          
The following BLAST results are available for this feature:
BLAST of CV884501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
PP1R7_RAT3.112e-2240.00Protein phosphatase 1 regulatory subunit 7 OS=Ratt... [more]
PP1R7_HUMAN4.065e-2240.00Protein phosphatase 1 regulatory subunit 7 OS=Homo... [more]
PP1R7_DANRE4.065e-2239.39Protein phosphatase 1 regulatory subunit 7 OS=Dani... [more]
PP1R7_PONAB1.545e-2139.26Protein phosphatase 1 regulatory subunit 7 OS=Pong... [more]
PP1R7_BOVIN7.666e-2137.04Protein phosphatase 1 regulatory subunit 7 OS=Bos ... [more]
PP1R7_MOUSE1.308e-2038.52Protein phosphatase 1 regulatory subunit 7 OS=Mus ... [more]
PP1R7_XENTR2.913e-2039.26Protein phosphatase 1 regulatory subunit 7 OS=Xeno... [more]
SDS22_YEAST1.107e-1941.73Protein phosphatase 1 regulatory subunit SDS22 OS=... [more]
PP1R7_DICDI5.494e-1937.69Protein phosphatase 1 regulatory subunit pprA OS=D... [more]
SDS22_SCHPO9.697e-1633.81Protein phosphatase 1 regulatory subunit SDS22 OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_003H03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884501 ID=CV884501; Name=CV884501; organism=Citrus sinensis; type=EST; length=746bp
TTTTTTTTTTTTTTTTTAAAAAAACTTCCTTCAACTTAAACACAAGAAGG
TACTTCCATAAAAAAATAAGAAGATTATCCAAACGGGGAAAAACAACAGT
AAAAGGCACATTAAAGCCTCAAATGTTTAGGCCAACTGCAACTACCCACT
ACTTTTTTACCAATGCATCACTTTCTGTGTCATCGGGGTCCTCCCAAAAC
TGATGTTCTCGTTCATAAGGAACCTCATGAACCACAAACTGCTTGATAAA
GGCTGTCACTTTATGAGGCTTTCAAGTGCCATAATCCTGACAAAAGGAAA
ACCCAAGGACACTATGACTTCTAAAGAAATACATCAAAATCAATCTGCTG
TATATTTGGGAAAATTTGTCTGAGGGTAGCAAAATAATTTGAAAATTTTG
CACAGGGGTTGTTCTCGAGGTAAATAGTGGTTAGTGTCTCTCTTGAACCA
GCAACAGCCTCAACAATGCTTTCAAGCGATTCAATTTGATTGTCATTAAG
CCATAAATCTTCTAACCGGGAAAGATTTTGAATGTCATCAACTAATGTTA
GCTTATTTGATGATACCTCCAACACATGAAGGTTGACTAATGTTGATAAG
CCCTCCATTTTGGAAATACCATTATGGCTCAAATATAGTTCTTCTAAAGC
AATACATTCCTCAAAACCTTTCATCGAAGTTAAACGGTTACTTTGCAAGC
TAATTTTTTTAATGCATTTCAAACCACATAAGTTTACTACTTTTAT
back to top