CV884500

Overview
NameCV884500
Unique NameCV884500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884500 vs. ExPASy Swiss-Prot
Match: PP1R7_RAT (Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus GN=Ppp1r7 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.226e-23
Identity = 57/141 (40.43%), Postives = 92/141 (65.25%), Query Frame = 1
Query:    1 RNRI-KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLDVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKSSNYSATLRQIFPNIQQIDS 420
            +N+I K+ NL  L  +  +S+QSNRLT ++G +  + L ELYLSHNGI  +EGL     L +LD++SN++  +++I +L+ L++ W+NDN +ES   + E + G+R +L T+YLE NP  K   Y   +    P+++QID+
Sbjct:  217 KNKITKLQNLDALSNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDE-LKGAR-SLETVYLERNPLQKDPQYRRKVMLALPSVRQIDA 355          
BLAST of CV884500 vs. ExPASy Swiss-Prot
Match: PP1R7_HUMAN (Protein phosphatase 1 regulatory subunit 7 OS=Homo sapiens GN=PPP1R7 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.601e-23
Identity = 57/141 (40.43%), Postives = 92/141 (65.25%), Query Frame = 1
Query:    1 RNRI-KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLDVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKSSNYSATLRQIFPNIQQIDS 420
            +N+I K+ NL  L  +  +S+QSNRLT ++G +  + L ELYLSHNGI  +EGL     L +LD++SN++  +++I +L+ L++ W+NDN +ES   + E + G+R +L T+YLE NP  K   Y   +    P+++QID+
Sbjct:  217 KNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDE-LKGAR-SLETVYLERNPLQKDPQYRRKVMLALPSVRQIDA 355          
BLAST of CV884500 vs. ExPASy Swiss-Prot
Match: PP1R7_DANRE (Protein phosphatase 1 regulatory subunit 7 OS=Danio rerio GN=ppp1r7 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.731e-23
Identity = 53/133 (39.85%), Postives = 84/133 (63.16%), Query Frame = 1
Query:   22 NLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLDVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKSSNYSATLRQIFPNIQQIDS 420
            NL GL  +  +S+QSNR+T ++G +  + L ELYLSHNGI  MEGL     L  LD+++N++  +++I +L+ L++ W+NDNQIE+   + E    + + L T+YLE NP  K   Y   +    P+++QID+
Sbjct:  210 NLDGLHNLTVLSIQSNRITKLEGLQNLVNLRELYLSHNGIEVMEGLENNKKLSTLDIAANRIKKIENISHLTDLKEFWMNDNQIENWADLDE--LKNAKGLETVYLERNPLQKDPQYRRKIMLALPSVRQIDA 340          
BLAST of CV884500 vs. ExPASy Swiss-Prot
Match: PP1R7_PONAB (Protein phosphatase 1 regulatory subunit 7 OS=Pongo abelii GN=PPP1R7 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23
Identity = 56/141 (39.72%), Postives = 92/141 (65.25%), Query Frame = 1
Query:    1 RNRI-KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLDVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKSSNYSATLRQIFPNIQQIDS 420
            +N+I K+ NL  L  +  +S+QSNRLT ++G +  + L+ELYLSHNGI  +EGL     L +LD++SN++  +++I +L+  ++ W+NDN +ES   + E + G+R +L T+YLE NP  K   Y   +    P+++QID+
Sbjct:  217 KNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLQELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTEPQEFWMNDNLLESWSDLDE-LKGAR-SLETVYLERNPLQKDPQYRRKVMLALPSVRQIDA 355          
BLAST of CV884500 vs. ExPASy Swiss-Prot
Match: PP1R7_BOVIN (Protein phosphatase 1 regulatory subunit 7 OS=Bos taurus GN=PPP1R7 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22
Identity = 53/141 (37.59%), Postives = 91/141 (64.54%), Query Frame = 1
Query:    1 RNRI-KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLDVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKSSNYSATLRQIFPNIQQIDS 420
            +N+I K+ NL  L  +  +S+QSNRLT ++G +  + L ELYLSHNGI  +EGL     L +LD++SN++  ++++ +L+ L++ W+NDN ++    + E + G+R +L T+YLE NP  +   Y   +    P+++QID+
Sbjct:  217 KNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLDNNNKLTMLDIASNRIKKIENVSHLTELQEFWMNDNLLDCWSDLDE-LKGAR-SLETVYLERNPLQRDPQYRRKIMLALPSVRQIDA 355          
BLAST of CV884500 vs. ExPASy Swiss-Prot
Match: PP1R7_MOUSE (Protein phosphatase 1 regulatory subunit 7 OS=Mus musculus GN=Ppp1r7 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.150e-22
Identity = 55/141 (39.01%), Postives = 91/141 (64.54%), Query Frame = 1
Query:    1 RNRI-KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLDVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKSSNYSATLRQIFPNIQQIDS 420
            +N+I K+ NL  L  +  +S+QSNRL  ++G +  + L ELYLS+NGI  +EGL     L +LD++SN++  +++I +L+ L++ W+NDN +ES   + E + G+R +L T+YLE NP  K   Y   +    P+++QID+
Sbjct:  218 KNKITKLQNLDALTNLTVLSVQSNRLAKIEGLQSLVNLRELYLSNNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDE-LKGAR-SLETVYLERNPLQKDPQYRRKVMLALPSVRQIDA 356          
BLAST of CV884500 vs. ExPASy Swiss-Prot
Match: PP1R7_XENTR (Protein phosphatase 1 regulatory subunit 7 OS=Xenopus tropicalis GN=ppp1r7 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.147e-21
Identity = 56/141 (39.72%), Postives = 92/141 (65.25%), Query Frame = 1
Query:    1 RNRI-KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLDVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKSSNYSATLRQIFPNIQQIDS 420
            +N+I K+ NL  L  +  +S+QSNRLT ++G +  + L ELYLS NGI  +EGL     L  LD++SN++  +++I++LS L++ W+NDN +E+  S +E ++G+   L T+YLE NP  K + Y   +    P+++QID+
Sbjct:  203 KNKITKLQNLETLTNLTVLSVQSNRLTKIEGLQNLVNLRELYLSDNGIQVIEGLENNNKLTTLDLASNRIKRIENIKHLSELQEFWMNDNLVENW-SDLEELSGA-PGLQTVYLERNPLQKDAQYRRKIMLALPSVRQIDA 341          
BLAST of CV884500 vs. ExPASy Swiss-Prot
Match: SDS22_YEAST (Protein phosphatase 1 regulatory subunit SDS22 OS=Saccharomyces cerevisiae GN=SDS22 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.437e-21
Identity = 59/140 (42.14%), Postives = 92/140 (65.71%), Query Frame = 1
Query:   13 KVVNLCGLKCIKKISLQSNRLTSMKGFEECIALEELYLSHNGISKMEGLSTLVNLHVLDVSSNKLTLVDDIQNLSRLEDLWLNDNQI-ESLESIVEAVAGSRETLTTIYLENNPCA---KSSNYSATLRQIFPNIQQIDS 420
            +++NL  LK +K +S+QSN+L  ++  EE   LEELYLSHN I+K+EGL   + L  LDV+SNK+T ++++ +LS L D+W + N+I +S ES+ E ++ +   L TIYLE NP     K+S        + P++Q+ID+
Sbjct:  195 RLINLHPLKNLKILSIQSNKLKKIENLEELTNLEELYLSHNFITKIEGLEKNLKLTTLDVTSNKITSLENLNHLSNLTDIWASFNKIDQSFESLGENLS-ALSRLETIYLEGNPIQLENKTSYRRKLTMNLPPSLQKIDA 333          

HSP 2 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 43/139 (30.94%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   13 KVVNLCGLKCIKKISLQSNRLTSMK--GFEECIALEELYLSHNGISKMEGLSTLVNLHVLDVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCA--KSSNYSATLRQIFPNIQQID 417
            K+ NL  LK +K + L  N++ S++   FE    LEE++L  N I ++  L  L NL +L + SNKL  +++++ L+ LE+L+L+ N I  +E + + +      LTT+ + +N     ++ N+ + L  I+ +  +ID
Sbjct:  149 KIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIWLGKNSIPRLINLHPLKNLKILSIQSNKLKKIENLEELTNLEELYLSHNFITKIEGLEKNL-----KLTTLDVTSNKITSLENLNHLSNLTDIWASFNKID 282          
BLAST of CV884500 vs. ExPASy Swiss-Prot
Match: PP1R7_DICDI (Protein phosphatase 1 regulatory subunit pprA OS=Dictyostelium discoideum GN=pprA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.826e-20
Identity = 53/143 (37.06%), Postives = 88/143 (61.54%), Query Frame = 1
Query:    1 RNRI-KVVNLCGLKCIKKISLQSNRLTSM--KGFEECIALEELYLSHNGISKMEGLSTLVNLHVLDVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKSSNYSATLRQIFPNIQQIDS 420
            RN+I ++  +  L  ++ +SLQSNRLT +  KG      LEELYLSHNGI+ ++GL +L  L  LD+S+NK+  +  +  L  L+++W NDN ++S+++I + V    +++  +Y E NP A    Y      +FP ++Q+D+
Sbjct:  191 RNKITEIKGINHLSHLRILSLQSNRLTEIGVKGLVGLNCLEELYLSHNGITDIDGLQSLKQLRTLDISANKIKTLVGLNELPDLDEIWCNDNLVDSMDNIEQQVT---KSIKCLYFERNPVATHVQYRRMFINMFPQLKQLDA 330          
BLAST of CV884500 vs. ExPASy Swiss-Prot
Match: SDS22_SCHPO (Protein phosphatase 1 regulatory subunit SDS22 OS=Schizosaccharomyces pombe GN=sds22 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17
Identity = 50/147 (34.01%), Postives = 88/147 (59.86%), Query Frame = 1
Query:    1 RNRI-KVVNLCGLKCIKKISLQSNRLTSMKGFEECIA--LEELYLSHNGISKMEGLSTLVNLHVLDVSSNKLTLVDDIQNLSRLEDLWLNDNQIESLESIVEAVAGSRETLTTIYLENNPCAKSSN--YSATLRQIFPNIQQIDSDV 426
            +N+I K  N   L+ +  +S+QSNR+T  +    C++  L ELY+SHNG++   G+  L NL +LDVS+N +  +  +  L  L +LW ++N++ S + I + ++G ++ L T+Y E NP  K++   Y   +R   P ++QID+ +
Sbjct:  179 KNKITKFENFEKLQKLSLLSIQSNRITQFENLA-CLSHCLRELYVSHNGLTSFSGIEVLENLEILDVSNNMIKHLSYLAGLKNLVELWASNNELSSFQEIEDELSGLKK-LETVYFEGNPLQKTNPAVYRNKVRLCLPQLRQIDATI 323          
The following BLAST results are available for this feature:
BLAST of CV884500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
PP1R7_RAT1.226e-2340.43Protein phosphatase 1 regulatory subunit 7 OS=Ratt... [more]
PP1R7_HUMAN1.601e-2340.43Protein phosphatase 1 regulatory subunit 7 OS=Homo... [more]
PP1R7_DANRE2.731e-2339.85Protein phosphatase 1 regulatory subunit 7 OS=Dani... [more]
PP1R7_PONAB6.084e-2339.72Protein phosphatase 1 regulatory subunit 7 OS=Pong... [more]
PP1R7_BOVIN3.019e-2237.59Protein phosphatase 1 regulatory subunit 7 OS=Bos ... [more]
PP1R7_MOUSE5.150e-2239.01Protein phosphatase 1 regulatory subunit 7 OS=Mus ... [more]
PP1R7_XENTR1.147e-2139.72Protein phosphatase 1 regulatory subunit 7 OS=Xeno... [more]
SDS22_YEAST7.437e-2142.14Protein phosphatase 1 regulatory subunit SDS22 OS=... [more]
PP1R7_DICDI2.826e-2037.06Protein phosphatase 1 regulatory subunit pprA OS=D... [more]
SDS22_SCHPO2.239e-1734.01Protein phosphatase 1 regulatory subunit SDS22 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003H03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884500 ID=CV884500; Name=CV884500; organism=Citrus sinensis; type=EST; length=734bp
CGAAATCGCATAAAAGTAGTAAACTTATGTGGTCTGAAATGCATTAAAAA
AATTAGCTTGCAAAGTAACCGTTTAACTTCGATGAAAGGTTTTGAGGAAT
GTATTGCTCTAGAAGAACTATATTTGAGCCATAATGGTATTTCCAAAATG
GAGGGCTTATCAACATTAGTCAACCTTCATGTGTTGGATGTATCATCAAA
TAAGCTAACATTAGTTGATGACATTCAAAATCTTTCCCGGTTAGAAGATT
TATGGCTTAATGACAATCAAATTGAATCGCTTGAAAGCATTGTTGAGGCT
GTTGCTGGTTCAAGAGAGACACTAACCACTATTTACCTCGAGAACAACCC
CTGTGCAAAATCTTCAAATTATTCTGCTACCCTCAGACAAATTTTCCCAA
ATATACAGCAGATTGATTCTGATGTATTTCTTTAGAAGTCATAGTGTCCT
TGGGTTCTCCTTTTGTCAGGACTATGGCACTTGAAAGCCTCATAAAGTGA
CAGCCTTTATCAAGCAGTTTGTGGTTCATGAGGTTCCTTATGAACGAGAA
CATCAGTTTTGGGAGGACACCGATGACACAGAAAGTGATGCATTGGTAAA
AAAGTAGTGGGTAGTTGCAGTTGGCCTAAACATTTGAGGCTCTAATGTGC
CTTTTACTGTTGTTTCTCCCCGTTTGGATAATCTTCTTATTTTTTTATTG
AAGTACCTTCTTGTGTTTAAGTTGAAGGAAGTTT
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