CV884477

Overview
NameCV884477
Unique NameCV884477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.432e-62
Identity = 115/166 (69.28%), Postives = 133/166 (80.12%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            VL VF GEC +CR C S KSN C+VLG+ER+G+MHSDQ+TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV  +APL KI              WNVAD+ KGS+VVIFGLGTVGLSVAQGAK RGA++I+GVD NP K E+AK FGVT+F+N ND +EP+ QV+
Sbjct:   94 VLAVFTGECGSCRHCISGKSNMCQVLGMERKGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSNDLSEPIPQVI 259          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.185e-46
Identity = 91/167 (54.49%), Postives = 117/167 (70.06%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            VL VF GECK C  CKS++SN C +L +   RGVM +D Q+RFSI GKP+YH+   S+FSEYTVVH GC  K++ +APL+K+               NVA  +KGS+V IFGLG VGL+ A+GA+  GASRIIGVD N  + E+AK FGVTEF+NP D ++PVQ+V+
Sbjct:   92 VLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVI 258          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.185e-46
Identity = 91/167 (54.49%), Postives = 117/167 (70.06%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            VL VF GECK C  CKS++SN C +L +   RGVM +D Q+RFSI GKP+YH+   S+FSEYTVVH GC  K++ +APL+K+               NVA  +KGS+V IFGLG VGL+ A+GA+  GASRIIGVD N  + E+AK FGVTEF+NP D ++PVQ+V+
Sbjct:   92 VLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVI 258          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.185e-46
Identity = 91/167 (54.49%), Postives = 117/167 (70.06%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            VL VF GECK C  CKS++SN C +L +   RGVM +D Q+RFSI GKP+YH+   S+FSEYTVVH GC  K++ +APL+K+               NVA  +KGS+V IFGLG VGL+ A+GA+  GASRIIGVD N  + E+AK FGVTEF+NP D ++PVQ+V+
Sbjct:   92 VLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVI 258          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.139e-46
Identity = 92/167 (55.09%), Postives = 115/167 (68.86%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            VL VF GECK C  CKS +SN C++L +   RGVM  D ++RFSI GKP+YH+   S+FSEYTV+H GC  K++  APL+K+               NVA   KGSTV IFGLG VGL+ A+GA+  GASRIIGVD NP + E+AK FG TEF+NP D+N+PVQ+VL
Sbjct:   91 VLPVFTGECKECPHCKSAESNMCDLLRINTVRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEAKKFGCTEFVNPKDHNKPVQEVL 257          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.218e-45
Identity = 90/167 (53.89%), Postives = 116/167 (69.46%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            VL VF GECK C  CKS +SN C++L +   RGVM +D ++RFSI GKP+YH+   S+FSEYTV+H GC  K++  APL+K+               NVA   KGSTV +FGLG VGL+ A+GA+  GASRIIGVD NP + E+A+ FG TEF+NP D+N+PVQ+VL
Sbjct:   91 VLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIADGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGYSTGLGASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVL 257          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 1.590e-45
Identity = 90/167 (53.89%), Postives = 115/167 (68.86%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            VL VF GECK C  CKS +SN C++L +   RGVM  D ++RFSI GKP+YH+   S+FSEYTV+H GC  K++  APL+K+               NVA   KGSTV +FGLG VGL+ A+GA+  GASRIIGVD NP + E+A+ FG TEF+NP D+N+PVQ+VL
Sbjct:   18 VLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVL 184          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.077e-45
Identity = 90/167 (53.89%), Postives = 117/167 (70.06%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            VL VF GECK C  CKS++SN C++L +   RGVM SD ++RFSIKGKP+YH+   S+FSEYTVVH GC  K++  APL+K+               NVA   KGSTV +FGLG VGL+ A+GA+  GASRIIGVD + ++ E+AK FGVTEF+NP  + +PVQ+V+
Sbjct:   92 VLPVFTGECKDCAHCKSEESNMCDLLRINTDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGISTGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKKFGVTEFVNPKAHEKPVQEVI 258          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.543e-45
Identity = 93/168 (55.36%), Postives = 115/168 (68.45%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN-NEPVQQVL 498
            VL VF GEC+ CR CKS++SN C++L +   RGVM  D QTRFS  GKP+YH+   S+FSEYTV HSGC  K+   APL+K+               NVA  +KGSTV IFGLG VGL+ A+GA+  GASRIIGVD NP +   AK FGVTEF+NP D+ ++PVQQV+
Sbjct:   93 VLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVNPKDHGDKPVQQVI 260          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 4.627e-45
Identity = 89/167 (53.29%), Postives = 116/167 (69.46%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            VL VF GECK C  CKS++SN C +L +   RGVM +D ++RFSI G P+YH+   S+FSEYTVVH GC  K++ +APL+K+               NVA  +KGS+V IFGLG VGL+ A+GA+  GASRIIGVD N  + E+AK FGVTEF+NP D ++PVQ+V+
Sbjct:   92 VLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMLNDGKSRFSINGNPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGASLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVI 258          
The following BLAST results are available for this feature:
BLAST of CV884477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADHL6_ARATH1.432e-6269.28Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADH3_SOLTU4.185e-4654.49Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU4.185e-4654.49Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH1_SOLTU4.185e-4654.49Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH1_PENAM7.139e-4655.09Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADH1_MAIZE1.218e-4553.89Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADH1_ZEALU1.590e-4553.89Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]
ADH_MALDO2.077e-4553.89Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH1_PETHY3.543e-4555.36Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH2_SOLLC4.627e-4553.29Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884477 ID=CV884477; Name=CV884477; organism=Citrus sinensis; type=EST; length=898bp
GTGCTTACAGTATTTATTGGAGAATGCAAGACATGCAGACAGTGTAAATC
TGATAAAAGCAACACGTGTGAAGTTCTGGGATTGGAAAGGAGAGGTGTGA
TGCACAGTGATCAGCAGACACGCTTCTCAATTAAAGGAAAGCCTGTTTAT
CACTATTGTGCTGTTTCAAGTTTCAGTGAGTATACCGTGGTGCATTCTGG
ATGTGCTGTCAAAGTTAGCTCAATTGCACCACTTGAAAAAATATGCCTTC
TGAGTTGTGGACTATCTGCAGGTCTTGGAGCAGCGTGGAATGTGGCAGAT
ATATCAAAAGGATCAACTGTGGTGATTTTTGGTCTTGGAACTGTAGGCCT
TTCTGTTGCACAAGGTGCAAAAGCCAGAGGAGCGTCTAGAATTATTGGCG
TTGACACTAACCCTGAGAAATGTGAAAAAGCCAAAGCTTTTGGAGTTACA
GAGTTTCTCAACCCAAATGATAATAATGAACCTGTTCAACAGGTATTACC
ATTTAGTCTAGTTAGCAGCAACAGTTTAGCAACTTTTTAACAAAATAAAG
AAAAAATTTGTATGAGTACATAAGAAGTGCATTAGTGAGACACAAAGTGG
TTATCTCTACTTTTTAATCTAGTTCTTTTTCGCTCCCAAAAAACAAACAA
GGGACTACTCAGCCTTATCACCAGTGGTAATAAGAATTCAGATCCTATTG
AAGAAGCTATTTATAGTGTGTAATATGCAAGTATAACAAGGAAATGCAAA
CATGAGCTCTAATTTTGTGCCCTTCCATGTAGCATACTTGTGGAGACATG
CAATTGCAGACACACTGATGTGCTGATGCAATGCACACCTGCAATACATA
ATTTAATAGAATCCTGAAGTTTGATCAACATTCTGTGTTTATTAACAT
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