CV884476

Overview
NameCV884476
Unique NameCV884476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3937 contig Csv1_Contig3937:1294..2147. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 8.998e-104
Identity = 187/225 (83.11%), Postives = 202/225 (89.78%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            KKI LVDSKGLIV SRKDSLQ FKKPWAHEHEPV +LLDAVKVIKPT+LIGSSGVG+ FTKEVIEAMAS NEKPLILALSNPTSQSECTAEEAYTW++GRAIFASGSPFDP EYNGK FVPGQANNAYIFPG G+GLVISGAIRVHD+MLLAASEALA+QVT+ENF+KGLIYPPFSNIR             AYELG+ATRLP+P+NLVK AESCMY+PVYR+YR
Sbjct:  367 KKIWLVDSKGLIVGSRKDSLQQFKKPWAHEHEPVKDLLDAVKVIKPTVLIGSSGVGKAFTKEVIEAMASCNEKPLILALSNPTSQSECTAEEAYTWTQGRAIFASGSPFDPVEYNGKTFVPGQANNAYIFPGLGMGLVISGAIRVHDEMLLAASEALARQVTQENFDKGLIYPPFSNIRKISAHIAANVAAKAYELGLATRLPQPENLVKYAESCMYSPVYRSYR 591          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 359.762 bits (922), Expect = 1.138e-98
Identity = 179/225 (79.56%), Postives = 193/225 (85.78%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            KKI L DSKGLIVSSRK+SLQHFKKPWAHEHEPV  LL+ VK IKP +LIG+SGVG+TFTKEVIEAMASFNEKPLILALSNPTSQSECTA+EAYTW+KG+AIFASGSPFDP EY GKVFVPGQ+NNAYIFPG GLGLVISGAIRVHDDMLLAA+EALA Q+ EE   KGLIYPP SNIR             AYELG+ATRLPRP+NLVK AESCMY+P YR YR
Sbjct:  367 KKIWLTDSKGLIVSSRKESLQHFKKPWAHEHEPVKGLLEVVKAIKPIVLIGTSGVGKTFTKEVIEAMASFNEKPLILALSNPTSQSECTAQEAYTWTKGKAIFASGSPFDPVEYEGKVFVPGQSNNAYIFPGLGLGLVISGAIRVHDDMLLAAAEALAGQIKEEYLAKGLIYPPLSNIRKISVQIAANVAAKAYELGLATRLPRPENLVKHAESCMYSPAYRYYR 591          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 1.138e-98
Identity = 175/225 (77.78%), Postives = 197/225 (87.56%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            KKI LVDSKGLIV SR DSLQHFKKPWAH+HEPVN  LDAVK IKPT+LIGSSG G+TFTKEV+EAM+SFNEKP+ILALSNPTSQSECTAE+AYTWS+GR IFASGSPF P EYNGKV+V GQ+NNAYIFPGFGLGL+ISGAIRVHD+MLLAASEALA+QVT+E+F+ GLIYPPF+NIR             AYELG+A+RLP+P+NLV  AESCMY+P YRNYR
Sbjct:  423 KKIWLVDSKGLIVRSRLDSLQHFKKPWAHDHEPVNKFLDAVKAIKPTVLIGSSGAGQTFTKEVVEAMSSFNEKPIILALSNPTSQSECTAEQAYTWSEGRTIFASGSPFAPVEYNGKVYVSGQSNNAYIFPGFGLGLIISGAIRVHDEMLLAASEALAEQVTQEHFDNGLIYPPFTNIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRNYR 647          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 6.246e-97
Identity = 175/225 (77.78%), Postives = 195/225 (86.67%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            KKI LVDSKGLIVSSR +SLQ FKKPWAHEHEPV  LL+AVK IKPT+LIGSSG G+TFTKEV+E MAS NEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDP EY GK+FVPGQANNAYIFPGFGLGL++SGAIRV D+MLLAASEALA QV+EEN++KGLIYPPF+NIR             AY+LG+A+ L RP++LVK AESCMY+P YR+YR
Sbjct:  365 KKIWLVDSKGLIVSSRLESLQQFKKPWAHEHEPVKGLLEAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLLAASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLKRPKDLVKYAESCMYSPGYRSYR 589          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 352.443 bits (903), Expect = 1.817e-96
Identity = 170/225 (75.56%), Postives = 196/225 (87.11%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            KK+ L+DSKGLIV+SRK+SLQ FKKPWAHEHEPV  LLDAV+ IKPT+LIG+SGVG+TFTKEVIEAMASFNE+P+I +LSNPTS SECTAEEAY WS+GRA+FASGSPFDP EYNGK+ VPGQ+NNAYIFPGFGLG+VISGA+RVH+DMLLAASE LA Q T+ENFEKG I+PPF+NIR             AYELG+ATRLP+P++L K AESCMYTPVYR+YR
Sbjct:  415 KKVWLLDSKGLIVNSRKESLQAFKKPWAHEHEPVTTLLDAVQSIKPTVLIGTSGVGKTFTKEVIEAMASFNERPVIFSLSNPTSHSECTAEEAYNWSQGRAVFASGSPFDPVEYNGKIHVPGQSNNAYIFPGFGLGVVISGAVRVHEDMLLAASETLADQATQENFEKGSIFPPFTNIRKISARIAASVAAKAYELGLATRLPQPRDLEKYAESCMYTPVYRSYR 639          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 1.178e-95
Identity = 169/225 (75.11%), Postives = 195/225 (86.67%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            KK+ LVDSKGLIV SR DSLQHFKKPWAH+HEPVN  LDA+K I+PT+LIGSSG G+TFTKEV+E M+S NEKP+ILALSNPTSQSECTAE+AYTWS+GRAIFASGSPF P EYNGK++V GQANNAYIFPGFGLGL+ISGAIRVHDDMLLAASEA A+QVT+E+F+KGLI+PPF++IR             AYELG+A+RLP+P+NLV  AESCMY+P YR YR
Sbjct:  424 KKVWLVDSKGLIVRSRLDSLQHFKKPWAHDHEPVNEFLDAIKTIRPTVLIGSSGTGQTFTKEVVETMSSLNEKPIILALSNPTSQSECTAEQAYTWSEGRAIFASGSPFKPVEYNGKLYVSGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEAPAEQVTQEHFDKGLIFPPFTSIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRIYR 648          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.881e-93
Identity = 166/225 (73.78%), Postives = 191/225 (84.89%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            KK+ LVDSKGLIV SRK SLQ FKKPWAHEHEP+  L DAV+ IKPT+LIG+SGVGRTFTKE+IEAM+SFNE+P+I +LSNPTS SECTAE+AYTWS+GR+IFASGSPF P EY GK FVPGQ+NNAYIFPG GLGLVISGA+RVH+DMLLAAS+ALA Q T++NFEKG I+PPF++IR             AYELG+ATRLP P +LVK AE+CMYTPVYRNYR
Sbjct:  412 KKVWLVDSKGLIVDSRKGSLQPFKKPWAHEHEPLKTLYDAVQSIKPTVLIGTSGVGRTFTKEIIEAMSSFNERPIIFSLSNPTSHSECTAEQAYTWSQGRSIFASGSPFAPVEYEGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDMLLAASKALADQATQDNFEKGSIFPPFTSIRKISAHIAAAVAGKAYELGLATRLPPPSDLVKYAENCMYTPVYRNYR 636          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 9.333e-93
Identity = 166/225 (73.78%), Postives = 189/225 (84.00%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            KKI LVDSKGL+VSSRK++LQ FK PWAHEHEP+  L+DAV+ IKPT+LIG+SG G+ FTKEV+EAMA+ N KPLILALSNPTSQSECTAEEAYTWS+G AIFASGSPFDP EY G+ FVPGQANNAYIFPGFGLGL++ GAIRVHDDMLLAASEALA QVT E+F KGLIYPPF +IR             AYELG+A+RLP+P +LVK AESCMY P YR++R
Sbjct:  361 KKIWLVDSKGLVVSSRKETLQQFKLPWAHEHEPITTLIDAVQAIKPTVLIGTSGKGKQFTKEVVEAMANINAKPLILALSNPTSQSECTAEEAYTWSQGHAIFASGSPFDPVEYEGRTFVPGQANNAYIFPGFGLGLIMCGAIRVHDDMLLAASEALASQVTGEHFIKGLIYPPFKDIRKISAHIAAGVAAKAYELGLASRLPQPADLVKFAESCMYNPTYRSFR 585          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 2.079e-92
Identity = 167/225 (74.22%), Postives = 191/225 (84.89%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            KKI +VDSKGLIV SR + LQHFK+PWAH+HEPV  L++AVK IKPT+LIGSSG GRTFTKEV++AMA+FNEKP+I ALSNPTSQSECTAEEAY+WS+GRAIFASGSPF P EYNGKV+  GQANNAYIFPGFGLGL+ISGAIRVHDDMLL ASEALA +V++ENFEKG   PPFSNIR             AYELG+ATRLP+P++LV  AESCMY+P YR+YR
Sbjct:  350 KKIWMVDSKGLIVKSRMEMLQHFKRPWAHDHEPVQELVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLVASEALADEVSQENFEKGTHIPPFSNIR-KISAHIAKVAAKAYELGLATRLPQPKDLVAYAESCMYSPAYRSYR 573          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.120e-52
Identity = 103/225 (45.78%), Postives = 148/225 (65.78%), Query Frame = -2
Query:  182 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNY 853
            K+I +VDSKGLIV  R  SL   K  +AHEH  + NL D VK IKP++LIG + +G  FTKE+++ MA+FN++P+I ALSNPTS++ECTAE+ Y +++GR IFASGSPFDP    NGK   PGQ NN+Y+FPG  LG++  G   + +D+ L  +E +A+QV+EEN ++G +YPP   I+             AY    A+  P+P++L    +S +Y+  Y ++
Sbjct:  318 KRIWMVDSKGLIVKGRA-SLTAEKTRFAHEHAEMKNLEDIVKDIKPSVLIGVAAIGGAFTKEILQDMAAFNKRPIIFALSNPTSKAECTAEQCYKYTEGRGIFASGSPFDPVTLPNGKTLYPGQGNNSYVFPGVALGVIACGLKHIGEDVFLTTAEVIAEQVSEENLQEGRLYPPLVTIQHVSLKIAVRIAEEAYRNNTASTYPQPKDLEAFIQSQIYSTDYNSF 541          
The following BLAST results are available for this feature:
BLAST of CV884476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_VITVI8.998e-10483.11NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOX_POPTR1.138e-9879.56NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_FLAPR1.138e-9877.78NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_PHAVU6.246e-9777.78NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_ORYSJ1.817e-9675.56NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_FLATR1.178e-9575.11NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_MAIZE1.881e-9373.78NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_MESCR9.333e-9373.78NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_SOLLC2.079e-9274.22NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOX_ANAPL6.120e-5245.78NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884476 ID=CV884476; Name=CV884476; organism=Citrus sinensis; type=EST; length=854bp
TTTTTTTTTTTTTTTTTCACCATGTAGGCAGTGGTCCAACACCTTCATTT
GATAAGTACACATATACAGCAATACTTACACAAGTACAAAAGCCACCATA
ACACACCAAAACAAGTTATTTGACATTATTTTTGCTTAAAGACACTCAGC
GGAGACAGAAATTTTGGCAGAACATTTAACGATAGTTTCGGTAGACAGGG
GTATACATGCAACTTTCAGCGCACTTCACTAGATTCTGAGGTCGAGGGAG
ACGCGTAGCCACGCCTAGTTCATATGCCTTAGCAGCAACATTAGCAGCTA
TATTGGCTGAAATTTTTCTAATATTAGAAAATGGTGGGTAGATCAATCCC
TTCTCAAAGTTCTCTTCTGTCACTTGTTTTGCCAAGGCTTCCGAGGCTGC
CAGAAGCATGTCGTCATGTACCCGAATTGCTCCAGAGATGACCAAACCCA
AACCAAATCCAGGGAAGATGTAAGCATTGTTGGCCTGGCCAGGAACAAAA
ACTTTTCCATTGTATTCAAAAGGATCAAATGGACTTCCACTAGCGAAAAT
TGCACGACCCTTACTCCAAGTGTAAGCTTCTTCAGCTGTACATTCTGACT
GTGAGGTTGGGTTGGAGAGAGCCAGGATGAGAGGTTTCTCATTGAAGGAG
GCCATGGCCTCGATTACTTCTTTTGTAAAAGTTCTTCCAACTCCAGATGA
TCCAATCAAAATTGTTGGCTTGATTACCTTGACAGCATCTAAGAGATTGT
TGACAGGCTCATGTTCATGAGCCCAAGGCTTCTTGAAGTGTTGAAGTGAA
TCTTTCCGGGAGCTGACTATCAGTCCCTTTGAGTCTACAAGACATATCTT
CTTC
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