CV884472

Overview
NameCV884472
Unique NameCV884472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:339..1178. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 419.853 bits (1078), Expect = 9.048e-117
Identity = 199/236 (84.32%), Postives = 218/236 (92.37%), Query Frame = -2
Query:  133 EMDRSLVMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLH 840
            E DRS  +RNFRYIE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVLE+F +IGID PGLVALLGSHSVGRTHCVKLVHRLYPEVDP+LNPDHVPHMLHKCPD+IPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGL++VDHQLA DKRTRP VKKMAK Q YFFKEF+RAI +LSENNPLTG+KGEIRK CNLANK H
Sbjct:   95 EHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLANKNH 330          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.252e-74
Identity = 133/231 (57.58%), Postives = 169/231 (73.16%), Query Frame = -2
Query:  142 RSLVMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPL-KTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 831
            RS  MRNF+Y++ IK+A+E+ECP  VSCADI+ LS RDG+V L GP I + KTGRRD R S    +E  +P+HNDS+S V+  F +IGID    VALLG+HSVGR HCV LVHRLYP +DP L+P +  ++  +CP   PDP AV Y RNDR TPMV+DN YY+NI+ +KGL+++D +LATD RT P+V KMA   +YF ++FSR + LLSE NPLTG +GEIRK C   N
Sbjct:   97 RSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.437e-37
Identity = 84/229 (36.68%), Postives = 130/229 (56.77%), Query Frame = -2
Query:  142 SLVMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 828
            SL    F  +   K A+E  CP  VSC+DI+ ++ RD +V +GGPY  +  GRRD R S++ ++   LP  +  +S ++++F++ G     +VAL G+H++G +HC +  +R+ P      NP     +   C ++  DP     V ND  TP   DN Y++NI    GL+  DH L +D RTRP+V+  A+ Q  FF +F+ A+  LS +  LTG +GEIR+ C+  N
Sbjct:  102 SLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKKACSNSKNDPTI--SVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.694e-36
Identity = 87/230 (37.83%), Postives = 129/230 (56.09%), Query Frame = -2
Query:  142 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHR--LYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 810
            F  IE++K  +E  CPG VSCADILVL+ RD V ALGGP +P+ TGRRDGR S A  +   + D + ++  ++  F++ G+    LV L G+H++G  HC     R  L P+     +D +L+  +   +++KC  ++ DP     V ND  T    DN YY+N+L +KGL   D  L  D RTR  V+ +A  Q+ FF  ++ +   +S      G +GEIR+ C+  N
Sbjct:  102 FAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSL-DP-TTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDDRTRKIVEILANDQESFFDRWTESFLKMSLMGVRVGEEGEIRRSCSAVN 329          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.519e-36
Identity = 87/236 (36.86%), Postives = 131/236 (55.51%), Query Frame = -2
Query:  133 EMDRSLVMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLH 840
            +++ SL    F  +  IK A+E  CPGVVSCADIL  + RD V  +GGP+  +K GR+DG +S+A  ++  LP  N S+  +L  F   G     LVAL G H++G +HC +  +R++P+VDP LN      +   C +   +     ++  D  TP   DN Y++N+    GL+  DH L  D  TRP+V+  A +Q  FF++F+RA+  L          GE+R+ C+  NKL+
Sbjct:   92 DLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDPELNAKFAGVLKDLCKNFETNKTMAAFL--DPVTPGKFDNMYFKNLKRGLGLLASDHILFKDPSTRPFVELYANNQTAFFEDFARAMEKLGRVGVKGEKDGEVRRRCDHFNKLN 325          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.596e-36
Identity = 83/225 (36.89%), Postives = 121/225 (53.78%), Query Frame = -2
Query:  142 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 816
            R F  I+NIK AVE+ CPGVVSCADIL ++ RD VVALGGP   +K GRRD R +        +P    S+S ++  F+A+G+    +VAL G+H++G++ C     R+Y E +  +N          CP A            D  T    DNNY++N++  +GL+  D  L     T   V+  + +   F  +F+ A+  + + +PLTG+ GEIRKVC   N
Sbjct:  103 RGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNETN--INAAFATTRQRTCPRASGSGDG-NLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFNGGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLTGSSGEIRKVCGRTN 324          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.337e-35
Identity = 86/235 (36.60%), Postives = 126/235 (53.62%), Query Frame = -2
Query:  130 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK-RTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHD 816
            R F  I+ IK A+E ECP  VSCAD+L L  RD +V  GGP   +  GRRD R++      + +P    ++  +L  F   G+D   LVALLGSH++G + C+    RLY      + D  LN D+   +   CP +  D         D  TP   DN YY+N+++ +GL+  D  L T    T   VK  A+++  FF++F++++  +   +PLTGT GEIR++C   N  HD
Sbjct:  114 RGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNL---DYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRICRRVN--HD 343          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.746e-35
Identity = 83/231 (35.93%), Postives = 128/231 (55.41%), Query Frame = -2
Query:  142 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 816
            R F  IE IK A+E+ECP  VSCADIL L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D   LV+L GSH++G + C     RLY +      D  L+  +   +  +CP +  D         D  TP   DN+Y++N++  KGL+  D  L T +K+++  V+  A++Q+ FF++F++++  +   +PLTG KGEIR++C   N
Sbjct:  106 RGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFL---DFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRRVN 333          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.979e-35
Identity = 87/229 (37.99%), Postives = 128/229 (55.90%), Query Frame = -2
Query:  142 SLVMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 828
            SL    F  I   K A+E  CP  VSC+DI+ ++ RD ++ +GGPY  +  GRRD R S++ +L   LP  +  +S ++++F + G     +VAL G+HS+G +HC + V R+    +   NP     +   C +   DP     V ND  TP   DN YY+N+    GL+  DH L +D RTR +V   AK+QD FFK+F++A+  LS     TG +GEIR+ C+  N
Sbjct:   91 SLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGRV-GRNNTGYNPRFAVALKKACANYPKDPTI--SVFNDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 5.081e-35
Identity = 87/265 (32.83%), Postives = 134/265 (50.57%), Query Frame = -2
Query:  145 SLVMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAI--------PD------------------------PKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLA 828
            +L ++ F  I+ +K  +E  CPGVVSCAD+LVL+ R+ V+  GGP+ PL+TGR+D   +  +  E  LP  + ++SV+L+RF+  G +    V+L G+HS+G THC    +RLY      + DP LNP  +  +  KCP ++        PD                         + +    N+ G        Y+R ++ NKGLM  D QL   + T  +V+  A     F +EF+ ++  LS  N LTG  G++R  C+ A
Sbjct:  136 NLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGSEVTEMWVRAYASDPLLFRREFAMSMMKLSSYNVLTGPLGQVRTSCSKA 400          
The following BLAST results are available for this feature:
BLAST of CV884472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER42_ARATH9.048e-11784.32Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH4.252e-7457.58Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER63_ARATH2.437e-3736.68Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER18_ARATH2.694e-3637.83Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER41_ARATH3.519e-3636.86Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER52_ARATH4.596e-3636.89Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER36_ARATH1.337e-3536.60Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER72_ARATH1.746e-3535.93Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER31_ARATH2.979e-3537.99Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER48_ARATH5.081e-3532.83Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884472 ID=CV884472; Name=CV884472; organism=Citrus sinensis; type=EST; length=841bp
CCTTTTTTTGAAACCATCTTATTGGGAGCTCATCTCACACTCTTTTCTTC
CTCATAGAAGAAACAAGGAAGAAAAATTTGGAGCTATTAACTTGTTGTAG
CTAATACAGCTGTTAGCTAGCTAGGACTTGTCGTGGAGCTTGTTGGCAAG
ATTGCAAACCTTTCGGATCTCACCCTTTGTACCTGTGAGAGGGTTGTTCT
CAGAAAGGAGAGTAATGGCTCTTGAAAATTCCTTGAAGAAGTAGTCTTGA
CTCTTGGCCATCTTCTTAACATAAGGTCTTGTCCTCTTGTCGGTGGCTAG
CTGATGATCAACCATCATCAAGCCCTTGTTGTCCAATATGTTCCTATAGT
AGTTGTTGTCCAGCACCATGGGTGTGCCACGGTCATTCCTCACATACTGA
ACAGCCTTGGGGTCTGGGATTGCATCAGGACACTTATGGAGCATATGCGG
AACATGGTCAGGGTTCAGTGCAGGGTCAACTTCTGGGTACAGACGGTGCA
CCAGCTTCACACAATGAGTTCTGCCAACACTGTGAGATCCTAGCAGAGCA
ACAAGTCCAGGGGCGTCAATGCCAATGGCTGCAAACCTCTCAAGAACAAC
AGACATGCTGTCGTTGTGATCTGGGAGATACTGCTCAAGTATCTCTGCTC
TGCTTTTTCTACCATCTCTTCTTCCTGTCTTGAGAGGAATGTAAGGGCCT
CCAAGCGCAACAACGCCATCTCTACCGGACAGGACAAGAATATCAGCACA
GGAAACAACACCAGGGCACTCTCTTTCAACAGCTTCTTTGATGTTCTCAA
TGTACCTGAAGTTCCTCATAACCAAGCTCCTGTCCATCTCC
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