CV884449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884449 vs. ExPASy Swiss-Prot
Match: TM1L2_MOUSE (TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.933e-22 Identity = 77/263 (29.28%), Postives = 127/263 (48.29%), Query Frame = 2 Query: 230 PVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIM-LKSPRIQYLALVLLETVVKNCEKAFSEVAAER-----VLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFPGRDNESLAPIFTPPRSVSETEVDATL----------------------------AEQIQRDIRGQSFTKEQTKEAFDVARNSIELLSTVLSS--SPQQDALQDDLTTTLVQQCRQSQFTV 910 PV + +E AT +L+ DW +N+++CD+IN + D IR +KKR+ ++ R LAL +LET VKNC F + A R VL +++ ++P T+V ++K L +I+AW ++ L Y+ L+ RGI FP D ++L+PI TP RSV E + AT+ A + I S + + D+ R + +++S +L+ Q+D+ +L L + CR Q + Sbjct: 12 PVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLSGNRNYREVMLALTVLETCVKNCGHRFHLLVANRDFIDSVLVKIISPKNNPPTIV--QDKVLALIQAWADAFRSSPDLTGVVHIYEELKRRGIEFPMADLDALSPIHTPQRSVPEMDPAATIPRSQTQPRTTAGTYSSPPPASYSTLQAPALSVTGPITANSEQIARLRSELDIVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQHRI 272
BLAST of CV884449 vs. ExPASy Swiss-Prot
Match: TM1L2_HUMAN (TOM1-like protein 2 OS=Homo sapiens GN=TOM1L2 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.625e-22 Identity = 76/260 (29.23%), Postives = 126/260 (48.46%), Query Frame = 2 Query: 230 PVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIM-LKSPRIQYLALVLLETVVKNCEKAFSEVAAER-----VLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFPGRDNESLAPIFTPPRSVSETEVDATL----------------------------AEQIQRDIRGQSFTKEQTKEAFDVARNSIELLSTVLSS--SPQQDALQDDLTTTLVQQCRQSQ 901 PV + +E AT +L+ DW +N+++CD+IN + D IR +KKR+ ++ R LAL +LET VKNC F + A R VL +++ ++P T+V ++K L +I+AW ++ L Y+ L+ +G+ FP D ++L+PI TP RSV E + AT+ A + I S + + DV R + +++S +L+ Q+D+ +L L + CR Q Sbjct: 12 PVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIV--QDKVLALIQAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQ 269
BLAST of CV884449 vs. ExPASy Swiss-Prot
Match: TM1L2_XENLA (TOM1-like protein 2 OS=Xenopus laevis GN=tom1l2 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.363e-20 Identity = 73/262 (27.86%), Postives = 127/262 (48.47%), Query Frame = 2 Query: 230 PVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIM-LKSPRIQYLALVLLETVVKNCEKAFSEVAAER-----VLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFPGRDNESLAPIFTPPRSVSETEVDATL--AEQIQRD----------------------------IRGQSFTKEQTKEAFDVARNSIELLSTVLSS-SPQQDALQD-DLTTTLVQQCRQSQ 901 PV + +E AT +L+ DW +N+++CD+IN + D +R +KKR+ ++ R LAL +LET VKNC F R +L +++ ++P T+V ++K L +I+AW ++ L Y+ L+ +GI FP D ++L+PI TP RSV E + + ++ +RD I S + + D+ R +++++S +L+ +P Q+ D +L L + CR Q Sbjct: 12 PVGQCIEKATDGSLQSEDWTLNMEICDIINETEEGPKDAMRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHVQVTHRDFIDGILVKIISPKNNPPTIV--QDKVLALIQAWADAFRSSPDLTGVVHIYEELKRKGIEFPMADLDALSPIHTPQRSVPEVDPATNMHTSQTQKRDSFSNLSNSKSTSTPYTAPGGPPPNVGGPISANSEQIGRLRSELDIVRGNVKVMSEMLTEMTPGQEGASDLELLQDLNRTCRTMQ 271
BLAST of CV884449 vs. ExPASy Swiss-Prot
Match: TOM1_MOUSE (Target of Myb protein 1 OS=Mus musculus GN=Tom1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.086e-20 Identity = 60/165 (36.36%), Postives = 93/165 (56.36%), Query Frame = 2 Query: 227 NPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIM-LKSPRIQYLALVLLETVVKNCEKAFSEVAA-----ERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFPGRDNESLAPIFTPPRSVSETE 703 +PV + +E AT +L+ DWA+N+++CD+IN + D R +KKRIM K+ LAL +LET VKNC F + A E VL + ++P T+V+ +K L +I++W ++ L Y+ LR +G+ FP D + L+PI TP R+V +E Sbjct: 11 SPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDAFRAVKKRIMGNKNFHEVMLALTVLETCVKNCGHRFHVLVANQDFVENVLVRTILPKNNPPTIVH--DKVLNLIQSWADAFRSSPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSE 173
BLAST of CV884449 vs. ExPASy Swiss-Prot
Match: TOM1_HUMAN (Target of Myb protein 1 OS=Homo sapiens GN=TOM1 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 4.031e-20 Identity = 63/185 (34.05%), Postives = 102/185 (55.14%), Query Frame = 2 Query: 227 NPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIM-LKSPRIQYLALVLLETVVKNCEKAFSEVAA-----ERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFPGRDNESLAPIFTPPRSVSETEV----DATLAEQIQRDIRGQ 751 +PV + +E AT +L+ DWA+N+++CD+IN + D +R +KKRI+ K+ LAL +LET VKNC F + A E VL + ++P T+V+ +K L +I++W ++ L Y+ LR +G+ FP D + L+PI TP R+V +E D+ + Q++ GQ Sbjct: 11 SPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVH--DKVLNLIQSWADAFRSSPDLTGVVTIYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETQSGQDSVGTDSSQQEDSGQ 193
BLAST of CV884449 vs. ExPASy Swiss-Prot
Match: TOM1_CHICK (Target of Myb protein 1 OS=Gallus gallus GN=TOM1 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.889e-18 Identity = 58/161 (36.02%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 227 NPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIM-LKSPRIQYLALVLLETVVKNCEKAF-----SEVAAERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFPGRDNESLAPIFTPPRSV 691 +PV + +E AT +L DW++N+++CD+IN + D R IKKRI+ K+ LAL +LET VKNC F S+ E VL + ++P +V+ +K L +I++W ++ L Y+ LR +G+ FP D + L+PI TP RSV Sbjct: 11 SPVGQRIERATDGSLRGEDWSLNMEICDIINETEEGPKDAFRAIKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHILVASQDFVESVLVRTILPKNNPPAIVH--DKVLTLIQSWADAFRSSPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPRRSV 169
BLAST of CV884449 vs. ExPASy Swiss-Prot
Match: HGS_RAT (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus GN=Hgs PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.704e-16 Identity = 48/142 (33.80%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 218 QGPNPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIMLKSPRIQYLALVLLETVVKNC-EKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFP 640 +G E+L++ ATS+ L E DW L +CD+I + + IKK++ K+P + AL ++E+VVKNC + EVA ++ ++E+ +L+ Q VN RNK L +I+AW + V ++TY+ ++ G FP Sbjct: 3 RGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKR-QVEVNVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFP 143
BLAST of CV884449 vs. ExPASy Swiss-Prot
Match: HGS_MOUSE (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus GN=Hgs PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.704e-16 Identity = 48/142 (33.80%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 218 QGPNPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIMLKSPRIQYLALVLLETVVKNC-EKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFP 640 +G E+L++ ATS+ L E DW L +CD+I + + IKK++ K+P + AL ++E+VVKNC + EVA ++ ++E+ +L+ Q VN RNK L +I+AW + V ++TY+ ++ G FP Sbjct: 3 RGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKR-QVEVNVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFP 143
BLAST of CV884449 vs. ExPASy Swiss-Prot
Match: HGS_HUMAN (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Homo sapiens GN=HGS PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.612e-16 Identity = 48/142 (33.80%), Postives = 79/142 (55.63%), Query Frame = 2 Query: 218 QGPNPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIMLKSPRIQYLALVLLETVVKNC-EKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFP 640 +G E+L++ ATS+ L E DW L +CD+I + + IKK++ K+P + AL ++E+VVKNC + EVA ++ ++E+ L+ Q VN RNK L +I+AW + V ++TY+ ++ G FP Sbjct: 3 RGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKR-QVEVNVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFP 143
BLAST of CV884449 vs. ExPASy Swiss-Prot
Match: HGS_BOVIN (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Bos taurus GN=HGS PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.023e-16 Identity = 48/142 (33.80%), Postives = 79/142 (55.63%), Query Frame = 2 Query: 218 QGPNPVEKLVEDATSEALEEPDWAMNLDLCDMINTEKISSVDLIRGIKKRIMLKSPRIQYLALVLLETVVKNC-EKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALVMIEAWGESTSELRYLPVYEETYKSLRSRGIRFP 640 +G E+L++ ATS+ L E DW L +CD+I + + IKK++ K+P + AL ++E+VVKNC + EVA ++ ++E+ L+ Q VN RNK L +I+AW + V ++TY+ ++ G FP Sbjct: 3 RGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVSSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKR-QVEVNVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFP 143 The following BLAST results are available for this feature:
BLAST of CV884449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884449 ID=CV884449; Name=CV884449; organism=Citrus sinensis; type=EST; length=910bpback to top |