FC871865
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871865 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 9.554e-24 Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 3 Query: 90 LHEAFGAYSDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 275 L +AF + DI +SKIINDRETGRSRGFGFVTF+DEKSMRDAIEGMNGQ LDGRNITVNEAQ Sbjct: 22 LEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQ 83
BLAST of FC871865 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.741e-23 Identity = 50/62 (80.65%), Postives = 57/62 (91.94%), Query Frame = 3 Query: 90 LHEAFGAYSDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 275 L AF Y ++L+SKIINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 24 LETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of FC871865 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.192e-23 Identity = 49/62 (79.03%), Postives = 57/62 (91.94%), Query Frame = 3 Query: 90 LHEAFGAYSDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 275 L AF Y D+++SKIINDRETGRSRGFGFVTF+DEK+M+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 24 LETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of FC871865 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.014e-22 Identity = 48/62 (77.42%), Postives = 57/62 (91.94%), Query Frame = 3 Query: 90 LHEAFGAYSDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 275 L AF + ++++SKIINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 24 LETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of FC871865 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.877e-20 Identity = 47/62 (75.81%), Postives = 52/62 (83.87%), Query Frame = 3 Query: 90 LHEAFGAYSDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 275 LH AF Y ++LESKII DRET RSRGFGFVTF E++MR AIEGMNG+ LDGRNITVNEAQ Sbjct: 3 LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQ 64
BLAST of FC871865 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.907e-20 Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 3 Query: 90 LHEAFGAYSDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 275 L AF Y D+++SKII DRETGRSRGFGFVTF +++MR AIE MNGQ+LDGRNITVNEAQ Sbjct: 22 LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQ 83
BLAST of FC871865 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.907e-20 Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 3 Query: 90 LHEAFGAYSDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 275 L F + D+++SKIINDRE+GRSRGFGFVTF+DEK+MRDAIE MNG+ LDGR ITVNEAQ Sbjct: 22 LQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
BLAST of FC871865 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.907e-20 Identity = 44/62 (70.97%), Postives = 53/62 (85.48%), Query Frame = 3 Query: 90 LHEAFGAYSDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 275 L F + ++++SKIINDRETGRSRGFGFVTF+DEKSM+DAI+ MNG+ LDGR ITVNEAQ Sbjct: 22 LERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQ 83
BLAST of FC871865 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.428e-19 Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 3 Query: 90 LHEAFGAYSDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 275 L AF +Y +IL+SK+I DRETGRSRGFGFVTF E SM DAIE MNG+ LDGRNITVN+AQ Sbjct: 24 LENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of FC871865 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.578e-18 Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 3 Query: 90 LHEAFGAYSDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 275 L +AF + +++SK+I DRETGRSRGFGFVTF E+SM DAIE MNG+ LDGRNITVN+AQ Sbjct: 24 LEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQ 85 The following BLAST results are available for this feature:
BLAST of FC871865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871865 ID=FC871865; Name=FC871865; organism=Citrus sinensis; type=EST; length=454bpback to top |