CV884385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884385 vs. ExPASy Swiss-Prot
Match: SCL3_ARATH (Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.081e-33 Identity = 65/85 (76.47%), Postives = 78/85 (91.76%), Query Frame = -3 Query: 3 KMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGLKGRK 257 + DSFLN++WGLSPK+MVVTEQDS+HNG TLMERLLE+LY+YAALFDCLE+ V RTS +R+KVEKMLFGEEIKNII+CEG + R+ Sbjct: 328 RTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRE 412
BLAST of CV884385 vs. ExPASy Swiss-Prot
Match: SCL28_ARATH (Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.758e-12 Identity = 33/81 (40.74%), Postives = 54/81 (66.67%), Query Frame = -3 Query: 18 AKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEG 260 A + FL + +P +V+ EQ++ HN L R+ +L Y+A+FD + ++++ S+ R+KVE+MLFG EI+NI+ACEG Sbjct: 489 AAIRDFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEG 569
BLAST of CV884385 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.114e-12 Identity = 30/80 (37.50%), Postives = 52/80 (65.00%), Query Frame = -3 Query: 15 MDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGL 254 ++ ++S+ + PKI+ V EQ++NHNG ++R EAL+ Y+ LFD LE S + + L + ++ G +I N++ACEG+ Sbjct: 382 IEKVVSSIKAMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEGSGVAPASQDLAMSELYLGRQICNVVACEGM 461
BLAST of CV884385 vs. ExPASy Swiss-Prot
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.724e-12 Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = -3 Query: 18 MDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEG 254 ++ LN++ + P I+ V EQ++NHNG+ ++R EAL+ Y++LFD LE S S S +R+ E L G +I N++A EG Sbjct: 395 IEKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYL-GRQILNVVAAEG 472
BLAST of CV884385 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.315e-11 Identity = 30/79 (37.97%), Postives = 51/79 (64.56%), Query Frame = -3 Query: 18 MDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEG 254 +D FL+++ + P IM V EQ++NHNG ++R E+L+ Y++LFD LE S+ + + ++ G +I N++ACEG Sbjct: 359 IDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQDRV----MSELFLGRQILNLVACEG 433
BLAST of CV884385 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.645e-11 Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = -3 Query: 18 DSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEG 251 D L+ + L+PK++ V EQD N N R +EA Y+A+F+ L+ ++ R S ER+ VE+ +I NI+ACEG Sbjct: 444 DELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEG 521 The following BLAST results are available for this feature:
BLAST of CV884385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884385 ID=CV884385; Name=CV884385; organism=Citrus sinensis; type=EST; length=319bpback to top |