CV884384
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884384 vs. ExPASy Swiss-Prot
Match: SCL3_ARATH (Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.105e-37 Identity = 71/88 (80.68%), Postives = 83/88 (94.32%), Query Frame = 1 Query: 64 KMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHE 327 + DSFLN++WGLSPK+MVVTEQDS+HNG TLMERLLE+LY+YAALFDCLE+ V RTS +R+KVEKMLFGEEIKNII+CEGFER+ERHE Sbjct: 328 RTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHE 415
BLAST of CV884384 vs. ExPASy Swiss-Prot
Match: SCL28_ARATH (Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.046e-15 Identity = 37/88 (42.05%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 61 AKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERH 324 A + FL + +P +V+ EQ++ HN L R+ +L Y+A+FD + ++++ S+ R+KVE+MLFG EI+NI+ACEG R+ERH Sbjct: 489 AAIRDFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERH 576
BLAST of CV884384 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.046e-15 Identity = 35/87 (40.23%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 67 MDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHE 327 ++ ++S+ + PKI+ V EQ++NHNG ++R EAL+ Y+ LFD LE S + + L + ++ G +I N++ACEG +R ERHE Sbjct: 382 IEKVVSSIKAMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEGSGVAPASQDLAMSELYLGRQICNVVACEGMDRVERHE 468
BLAST of CV884384 vs. ExPASy Swiss-Prot
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.608e-15 Identity = 38/87 (43.68%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 67 MDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHE 327 ++ LN++ + P I+ V EQ++NHNG+ ++R EAL+ Y++LFD LE S S S +R+ E L G +I N++A EG +R ERHE Sbjct: 395 IEKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYL-GRQILNVVAAEGSDRVERHE 480
BLAST of CV884384 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.272e-14 Identity = 35/87 (40.23%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 67 MDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHE 327 +D FL+++ + P IM V EQ++NHNG ++R E+L+ Y++LFD LE S+ + + ++ G +I N++ACEG +R ERHE Sbjct: 359 IDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQDRV----MSELFLGRQILNLVACEGEDRVERHE 441
BLAST of CV884384 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.616e-13 Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 70 DSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHE 327 D L+ + L+PK++ V EQD N N R +EA Y+A+F+ L+ ++ R S ER+ VE+ +I NI+ACEG ER ER+E Sbjct: 444 DELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYE 529
BLAST of CV884384 vs. ExPASy Swiss-Prot
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.052e-12 Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 70 DSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHE 327 D L + LSPK++ + EQ+SN N R +E + YAA+F+ ++ ++ R +R+ VE+ ++ NIIACEG +R ERHE Sbjct: 342 DRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHE 427
BLAST of CV884384 vs. ExPASy Swiss-Prot
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.052e-12 Identity = 34/86 (39.53%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 70 DSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHE 327 D L + GLSPK+ + EQ+S+ N + R E + Y+A+F+ +++++ R + ER+ VE+ ++I NIIACEG +R ERHE Sbjct: 423 DGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRFGETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHE 508
BLAST of CV884384 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.374e-12 Identity = 37/100 (37.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 67 MDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSM-------------ERLKVEKMLFGEEIKNIIACEGFERKERHE 327 ++ LNS+ ++PKI+ + EQ++NHN ++R EAL+ Y+ +FD LESS S +S + L + ++ G +I N++ACEG +R ERHE Sbjct: 410 IEKVLNSIKQINPKIVTLVEQEANHNAGVFIDRFNEALHYYSTMFDSLESSGSSSSASPTGILPQPPVNNQDLVMSEVYLGRQICNVVACEGSDRVERHE 509
BLAST of CV884384 vs. ExPASy Swiss-Prot
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.795e-12 Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 1 Query: 70 DSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHE 327 D L + LSPK++ + EQ+ N N + R LE L Y A+F+ ++ + R ER+ +E+ ++ NIIACEG ER ERHE Sbjct: 265 DRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHE 350 The following BLAST results are available for this feature:
BLAST of CV884384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884384 ID=CV884384; Name=CV884384; organism=Citrus sinensis; type=EST; length=329bpback to top |