CV884372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884372 vs. ExPASy Swiss-Prot
Match: COQ1_NEUCR (Probable hexaprenyl pyrophosphate synthetase, mitochondrial OS=Neurospora crassa GN=NCU02305 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.192e-22 Identity = 67/183 (36.61%), Postives = 99/183 (54.10%), Query Frame = 2 Query: 335 IHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLM--ATALNVRVPEPLHDGVEDALA---------------------------TELRTRQQCIAEITEMIHVASLLHDDVLDDADTKRGIGSLNFVMGNKLAVLAGDFLLSRACV 796 +++ + I+ TD +DP LVA E+ L +R ++ + P L AA+Y+ + EGK RP ++LLM ATAL + P+ ++ + A T++ Q+ +AEITE+IH ASLLHDDV+D ++++RG S N GNK+AVLAGDFLL RA V Sbjct: 64 VNNAVTKAIKGTDGLPTIDPLRLVAGEMKFLTGNIRKLLGSGHPSLDRAAKYYTQ--AEGKHVRPLIVLLMSRATALCPKAPQRQQSTLQASAAIDTSISPLNILSDFNPSDATPVSIPADTDILPSQRRLAEITELIHTASLLHDDVIDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASV 244
BLAST of CV884372 vs. ExPASy Swiss-Prot
Match: COQ1_YARLI (Probable hexaprenyl pyrophosphate synthetase, mitochondrial OS=Yarrowia lipolytica GN=COQ1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.611e-19 Identity = 69/199 (34.67%), Postives = 102/199 (51.26%), Query Frame = 2 Query: 344 QSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHD--------------------GVEDALA----------------------------TELRTRQQCIAEITEMIHVASLLHDDVLDDADTKRGIGSLNFVMGNKLAVLAGDFLLSRACV 796 Q+S ++E TD+ + DPFS+V+ E+S LA + S++ + P L A Y+F+ EGK RP ++LL++ AL+ +PE D + D L+ + +Q+ +AEI EMIH ASLLHDDV+D++ T+RG + N GNK+A+LAGDFLL RA V Sbjct: 55 QASRLVE-TDTPIR-DPFSIVSQEMSTLANNIGSLIGSGHPTLNKVATYYFQS--EGKHVRPLIVLLLSRALSA-IPESERDRGTFDASDVTENVGELNPEPSINDPLSPIEILHGINPDIVLNPLSRPSDPLPYESNGILPKQRRLAEIVEMIHTASLLHDDVIDNSATRRGSPTGNVAFGNKMAILAGDFLLGRASV 248
BLAST of CV884372 vs. ExPASy Swiss-Prot
Match: PREA_SYNY3 (Prenyl transferase OS=Synechocystis sp. (strain PCC 6803) GN=preA PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.105e-19 Identity = 55/132 (41.67%), Postives = 82/132 (62.12%), Query Frame = 2 Query: 395 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTKRGIGSLNFVMGNKLAVLAGDFLLSRA 790 F+ V +L +L L+ +V A P L +AAE+ F+ G GKR RP ++LL++ A L EL R + +AEITEMIH ASL+HDDV+D+AD +R + ++N + N++AVLAGDFL +++ Sbjct: 8 FAPVDQDLRLLTDNLKRLVGARHPILGAAAEHLFEAG--GKRVRPAIVLLVSRAT--------------LLDQELTARHRRLAEITEMIHTASLVHDDVVDEADLRRNVPTVNSLFDNRVAVLAGDFLFAQS 123
BLAST of CV884372 vs. ExPASy Swiss-Prot
Match: DPS1_MOUSE (Decaprenyl-diphosphate synthase subunit 1 OS=Mus musculus GN=Pdss1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.590e-19 Identity = 63/166 (37.95%), Postives = 95/166 (57.23%), Query Frame = 2 Query: 308 PALHGIRHQIHHQSSSVIE--DTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTKRGIGSLNFVMGNKLAVLAGDFLLSRACV 796 P +H I Q H ++ ++ T S E+ DPF L +L L + +R + +L +EY+F +GK FRP +++LMA A N+ H+ A E++ Q+ IA + EMIH A+L+HDDV+DDA ++RG ++N + G K AVLAGD +LS A V Sbjct: 59 PTMHSIS-QFHQRTPAMCSCRQTQSGEKYSDPFKLGWRDLKGLYEDIRKELHISTRELKDMSEYYFDG--KGKAFRPIIVVLMARACNIH-----HNN-----AREMQASQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASV 211
BLAST of CV884372 vs. ExPASy Swiss-Prot
Match: DPS1_HUMAN (Decaprenyl-diphosphate synthase subunit 1 OS=Homo sapiens GN=PDSS1 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.327e-18 Identity = 55/152 (36.18%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 341 HQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTKRGIGSLNFVMGNKLAVLAGDFLLSRACV 796 H ++ + ++ DPF L +L L + +R ++ +L +EY+F +GK FRP ++ LMA A N+ H ++ Q+ IA I EMIH ASL+HDDV+DDA ++RG ++N + G K AVLAGD +LS A + Sbjct: 78 HHTTPDSKTHSGEKYTDPFKLGWRDLKGLYEDIRKELLISTSELKEMSEYYFDG--KGKAFRPIIVALMARACNIHHNNSRH----------VQASQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 217
BLAST of CV884372 vs. ExPASy Swiss-Prot
Match: PREA_CYAPA (Prenyl transferase OS=Cyanophora paradoxa GN=preA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17 Identity = 51/129 (39.53%), Postives = 84/129 (65.12%), Query Frame = 2 Query: 404 VADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTKRGIGSLNFVMGNKLAVLAGDFLLSRA 790 V +EL +L K L+ +V + P L++A+E+ F GKR RP ++LL++ A +E+ + T +R + +AEITE+IH ASL+HDD+LD++D +RGI +++ G K+A+LAGDFL +++ Sbjct: 11 VENELDLLTKNLKKLVGSGHPILSAASEHLFS--ASGKRPRPAIVLLISKAT-----------MENEIIT---SRHRRLAEITEIIHTASLVHDDILDESDVRRGIPTVHSDFGTKIAILAGDFLFAQS 123
BLAST of CV884372 vs. ExPASy Swiss-Prot
Match: DPS1_DICDI (Decaprenyl-diphosphate synthase OS=Dictyostelium discoideum GN=coq1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.668e-16 Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 464 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTKRGIGSLNFVMGNKLAVLAGDFLLSRACV 796 P L+S + Y+F++ +GKR RPT++LL++ AL+ V Q +AEI EMIH ASL+HDDV+D+A T+R + S+N NKLA+L GD+LL+RA V Sbjct: 168 PILSSISSYYFEL--KGKRIRPTIVLLLSKALSSTV----------------HGSQLKLAEIVEMIHTASLVHDDVIDEASTRRDVISINHSYTNKLAILCGDYLLARASV 260
BLAST of CV884372 vs. ExPASy Swiss-Prot
Match: PREA_PORYE (Prenyl transferase OS=Porphyra yezoensis GN=preA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.845e-16 Identity = 49/132 (37.12%), Postives = 79/132 (59.85%), Query Frame = 2 Query: 395 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTKRGIGSLNFVMGNKLAVLAGDFLLSRA 790 F V EL L K L+++ P L +AA++ F G GKR RP ++ L+A A + + ++ T Q+ +AEITE+IH ASL+HDD++D+ T+RG+ +++ + K+AVLAGDFL +++ Sbjct: 8 FYPVEQELCSLEKNLKAVAGTRHPILYAAAKHLFDAG--GKRVRPALVFLVAKATSEK--------------QDINTGQKRLAEITEIIHTASLVHDDIIDECTTRRGVKTVHNLFNTKIAVLAGDFLFAQS 123
BLAST of CV884372 vs. ExPASy Swiss-Prot
Match: PREA_CYACA (Prenyl transferase OS=Cyanidium caldarium GN=preA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.715e-16 Identity = 47/129 (36.43%), Postives = 80/129 (62.02%), Query Frame = 2 Query: 404 VADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTKRGIGSLNFVMGNKLAVLAGDFLLSRA 790 V ++L + + L ++ P L++AA++ + VE K+ RP ++LL+A A++ +++T QQ +AE+TE+IH A+LLHDDV+D++ +RG S+N GNK+AV AGDFL +++ Sbjct: 11 VKEDLLNIEQTLNKLIKVNNPILSAAAKHL--LIVESKKIRPAIVLLVAKAIDKN--------------KKIKTSQQRLAEVTEIIHTATLLHDDVVDESIIRRGTKSVNKTFGNKIAVFAGDFLFAQS 123
BLAST of CV884372 vs. ExPASy Swiss-Prot
Match: PREA_PORPU (Prenyl transferase OS=Porphyra purpurea GN=preA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.408e-15 Identity = 48/132 (36.36%), Postives = 79/132 (59.85%), Query Frame = 2 Query: 395 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTKRGIGSLNFVMGNKLAVLAGDFLLSRA 790 F + EL + L+S+ P L +AA++ F+ G GKR RP ++LL+A + + + E++ Q+ +AEITE+IH ASL+HDDV+D+ T+RG +++ + K+AVLAGDFL +++ Sbjct: 8 FHPIEKELYSVEHNLKSVAGTRHPILYAAAKHLFEAG--GKRLRPAIVLLVAKSTSEQ--------------QEIKPGQRRLAEITEIIHTASLVHDDVIDECSTRRGEKTVHKLFNTKIAVLAGDFLFAQS 123 The following BLAST results are available for this feature:
BLAST of CV884372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884372 ID=CV884372; Name=CV884372; organism=Citrus sinensis; type=EST; length=797bpback to top |