CV884365

Overview
NameCV884365
Unique NameCV884365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10290 contig Csv1_Contig10290:285..1083. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884365 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 69/222 (31.08%), Postives = 108/222 (48.65%), Query Frame = -3
Query:  156 MKTSLVTTLSFL----ILALATKPQLGASES--EPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGK-NGQ--CPTDVIQLSPKDKRGKNLGLLPYD-NSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNFFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGV-SNVDGVQRLVVVD 770
            MK   + +LSF     +LA A  P L A++S   P+LD+ G ++ +   YY+V  L     GGG++      NG   CP  V+Q   +    + L   P +    +VR ST++ + FS     +  +  ++W++D  + S G+ F+TIG  K      T  ++FK+E+   S F           YK+V C T V GSC   C DVG+  +  G +RL + D
Sbjct:    1 MKELTMLSLSFFFVSALLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRD--HGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSS-TVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGF-----------YKLVFCPT-VCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
BLAST of CV884365 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.908e-12
Identity = 57/218 (26.15%), Postives = 106/218 (48.62%), Query Frame = -3
Query:  147 MKTSLVTTLSFLILALATKPQ---LGASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLLPYDN-STIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNFFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGVSNVDGVQRLVVVDDND 770
            MKT+  T +  L+ A  +K     +  + + P+LD  G+++ +  +YY++S++ G   GGG++  +     CP  V+Q       G  +     D+   +VR ST++ ++F  +   + C+  ++W++DN + S GK ++T    K      T  ++FK+EK                 YK   C ++ + SC TLC D+G  + D  Q  + + DN+
Sbjct:    1 MKTA--TAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGA-GGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD-RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGV------------LGYKFRFCPSVCD-SCTTLCSDIGRHSDDDGQIRLALSDNE 201          
BLAST of CV884365 vs. ExPASy Swiss-Prot
Match: SPOR1_IPOBA (Sporamin A OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.700e-11
Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = -3
Query:  285 ASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKD-KRGKNLGLLPY---DNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGE-GKTCQNFFKLEKVSASIFDMKI 701
            AS   P+LD+ G++V +   YY+VSA+WG   GG   A      +C TDVI +SP D   G  + + P      ST+V  ST    +F+ +++ + C  +  W + +D+AS G+ F+  GE      N FK+E V A++   K+
Sbjct:   37 ASSETPVLDINGDEVRAGGNYYMVSAIWGAGGGGLRLAHLDMMSKCATDVI-VSPNDLDNGDPITITPATADPESTVVMASTYQTFRFN-IATNKLCVNNVNWGIQHDSAS-GQYFLKAGEFVSDNSNQFKIELVDANLNSYKL 177          
The following BLAST results are available for this feature:
BLAST of CV884365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MIRA_RICDU2.662e-1431.08Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC1.908e-1226.1521 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
SPOR1_IPOBA4.700e-1134.03Sporamin A OS=Ipomoea batatas PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002H11_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T7_H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884365 ID=CV884365; Name=CV884365; organism=Citrus sinensis; type=EST; length=799bp
TTTTTTTTTTTTTTTTTAAGAGTACTAGCCTGGTCCATTATTTAGAATAA
TACAGCCTGTTGGCTTATTCATTACAGAGACGGAAATAACATAGATCTTC
CACTATCAGCTGGAAATAACACAACAGGCAAAGGCAGATTTGGCTGATCA
TTATCATCAACCACAACTAGACGTTGGACGCCATCCACATTAGAAACGCC
AACGTCTTTGCAGAGTGTATCGCAAGAACCATTAACAAGTGTTGAACAAT
GAACAATTTTGTATAGACAGGGAATGTCTAGTGCTATTTTCATATCAAAT
ATTGATGCACTAACTTTCTCAAGTTTAAAAAAATTTTGACACGTTTTACC
TTCACCGATTGTTATAAACTGCTTTCCTAATGAAGCGTTATCGTTGTCAA
CTTTCCACAACGAATCTTTGTTACACTGCTGAAGAGAAGAAACTCTTGAG
AATTTCAATTTAATATTAGTGGATTCCCGGACAATTGTGGAATTGTCATA
CGGAAGTAAACCTAAATTCTTTCCCCTTTTGTCCTTAGGACTTAATTGGA
TAACATCCGTTGGACACTGTCCATTTTTGCCTTTGTCCGCGCTAATTCCA
CCGCCGGTTTTAACTCCCCAGAGTGCTGAGACAAGATAATACCTGTGGCT
GGAGTCCACCTGGTTGCCATAGACATCTAAGATAGGTTCAGATTCTGAGG
CGCCCAACTGAGGTTTTGTGGCCAAAGCAAGTATAAGGAAGGAGAGTGTT
GTTACTAATGAAGTCTTCATTTGTTTTTTTTTTTTTTTGAGGATAGCCT
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