CX043499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043499 vs. ExPASy Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.625e-31 Identity = 62/77 (80.52%), Postives = 69/77 (89.61%), Query Frame = 1 Query: 247 RAFSSESLTPRNVESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKF 477 R FSS S++P + LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKF Sbjct: 44 RGFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKF 120 HSP 2 Score: 27.7202 bits (60), Expect = 1.625e-31 Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 464 LSLNFVLSMSASKDVL 511 L L FVLSMSASKDVL Sbjct: 116 LILKFVLSMSASKDVL 131
BLAST of CX043499 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.080e-31 Identity = 63/86 (73.26%), Postives = 71/86 (82.56%), Query Frame = 1 Query: 220 LGPQFQLPCRAFSSESLTPRNVESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKF 477 L QF R FSS S++P + LV +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKF Sbjct: 45 LASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKF 130 HSP 2 Score: 27.7202 bits (60), Expect = 6.080e-31 Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 464 LSLNFVLSMSASKDVL 511 L L FVLSMSASKDVL Sbjct: 126 LILKFVLSMSASKDVL 141
BLAST of CX043499 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.080e-31 Identity = 63/86 (73.26%), Postives = 71/86 (82.56%), Query Frame = 1 Query: 220 LGPQFQLPCRAFSSESLTPRNVESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKF 477 L QF R FSS S++P + LV +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKF Sbjct: 45 LASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKF 130 HSP 2 Score: 27.7202 bits (60), Expect = 6.080e-31 Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 464 LSLNFVLSMSASKDVL 511 L L FVLSMSASKDVL Sbjct: 126 LILKFVLSMSASKDVL 141
BLAST of CX043499 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.031e-30 Identity = 61/77 (79.22%), Postives = 68/77 (88.31%), Query Frame = 1 Query: 247 RAFSSESLTPRNVESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKF 477 R FSS S++ + LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKF Sbjct: 58 RGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKF 134 HSP 2 Score: 27.7202 bits (60), Expect = 1.031e-30 Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 464 LSLNFVLSMSASKDVL 511 L L FVLSMSASKDVL Sbjct: 130 LILKFVLSMSASKDVL 145
BLAST of CX043499 vs. ExPASy Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.870e-30 Identity = 60/75 (80.00%), Postives = 67/75 (89.33%), Query Frame = 1 Query: 253 FSSESLTPRNVESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKF 477 FSS S++ + LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKF Sbjct: 24 FSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKF 98 HSP 2 Score: 27.7202 bits (60), Expect = 3.870e-30 Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 464 LSLNFVLSMSASKDVL 511 L L FVLSMSASKDVL Sbjct: 94 LILKFVLSMSASKDVL 109
BLAST of CX043499 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.109e-29 Identity = 59/83 (71.08%), Postives = 71/83 (85.54%), Query Frame = 1 Query: 232 FQLPCRAFSS-ESLTPRNVESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKF 477 F + R FSS E++ PRN ++ + +PATVAAVKNP K+VYDEYNHERYPPGDPSKRAFAYFVL+GGRF+YASL+RLL+LKF Sbjct: 53 FFVASRGFSSTETVVPRNQDAGLADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLSGGRFIYASLLRLLVLKF 135 HSP 2 Score: 27.7202 bits (60), Expect = 1.109e-29 Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 464 LSLNFVLSMSASKDVL 511 L L FVLSMSASKDVL Sbjct: 131 LVLKFVLSMSASKDVL 146
BLAST of CX043499 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.881e-29 Identity = 59/77 (76.62%), Postives = 67/77 (87.01%), Query Frame = 1 Query: 247 RAFSSESLTPRNVESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKF 477 R FSS S++P + LV +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYAS +RLLILKF Sbjct: 51 RGFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASSVRLLILKF 127 HSP 2 Score: 27.7202 bits (60), Expect = 1.881e-29 Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 464 LSLNFVLSMSASKDVL 511 L L FVLSMSASKDVL Sbjct: 123 LILKFVLSMSASKDVL 138 The following BLAST results are available for this feature:
BLAST of CX043499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043499 ID=CX043499; Name=CX043499; organism=Citrus sinensis; type=EST; length=511bpback to top |