CV884355

Overview
NameCV884355
Unique NameCV884355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV884355 vs. ExPASy Swiss-Prot
Match: GLGB_MAIZE (1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic OS=Zea mays GN=SBE1 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.416e-11
Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 2 
Query:    5 GKYKIALDSHYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYA 163
            G YK+ LDS   LFGG+ R+ H AE+F+++  +D+RP+SF VY PSRT VVYA
Sbjct:  744 GVYKVVLDSDAGLFGGFSRIHHAAEHFTADCSHDNRPYSFSVYTPSRTCVVYA 796
The following BLAST results are available for this feature:
BLAST of CV884355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GLGB_MAIZE7.416e-1156.601,4-alpha-glucan-branching enzyme 2, chloroplastic... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002H05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T7_H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884355 ID=CV884355; Name=CV884355; organism=Citrus sinensis; type=EST; length=574bp
AACCGGGAAGTATAAGATTGCCTTGGATTCACATTATCCACTGTTTGGAG
GCTACAAAAGGCTCGACCACAATGCCGAGTACTTCAGCTCGGAAGGGTGG
TATGATGACCGACCTCATTCCTTCTTGGTATATGCGCCAAGCAGAACGGC
TGTGGTCTATGCTTTAGCAGATGAAGAAGAGCAACCTCTTAATGTATAAA
ATTAAATAACCATCAGGTTCTATTTAATATGAGAGTTTCGAGAGATCTCC
TTGCTGTGCATCAGCATTCCACTTACCAATCTTGAGAATAAAAGTACAGT
GAGACTCGTTGAATTTTTGCATCACATAAATTGGGGAAGTCAGGATGAAC
ACGAGGAGAGGACAACATGCATGCAACGTTGCAATTTCATGCGAAGTATT
GGAGACCGATACCGTGTACCAATGTTTCCTGTGCCATGGTGTAAATGTTT
CTTGTTTCTTTATTGGCTAAAGTTGTGGTTACTGCTTATCAACTAGATAT
TTTACTATTTTTGTCAGACTACTGACTACGTGCTGTGAAATTGTATCTGA
ACCTTCAGTAATAACGCAGAGCCT
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