EY665263

Overview
NameEY665263
Unique NameEY665263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1036
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665263_ssr66 microsatellite EY665263_ssr66:66..75. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY665263 vs. ExPASy Swiss-Prot
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.631e-58
Identity = 110/132 (83.33%), Postives = 118/132 (89.39%), Query Frame = 1 
Query:  253 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVFQQAQSGTGKTATFCSGILQQLDYGLVPCQGLVMGPPKGTTQQIGKRREALG 648
            MA LAP+G+QFDARQYD+KMN+LL+ DG+DFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV QQAQSGTGKTATFCSGILQQLDYGLV CQ LV+ P +   QQI K   ALG
Sbjct:    1 MARLAPDGAQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALG 132
[Close]
BLAST of EY665263 vs. ExPASy Swiss-Prot
Match: IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.631e-58
Identity = 112/132 (84.85%), Postives = 116/132 (87.88%), Query Frame = 1 
Query:  253 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVFQQAQSGTGKTATFCSGILQQLDYGLVPCQGLVMGPPKGTTQQIGKRREALG 648
            MAG APEGSQFDARQ+DTKMNELLS DGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV QQAQSGTGKTATFCSGILQQL Y L+ CQ LV+ P +   QQI K   ALG
Sbjct:    1 MAGAAPEGSQFDARQFDTKMNELLSADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLAYELLECQALVLAPTRELAQQIEKVMRALG 132
[Close]
BLAST of EY665263 vs. ExPASy Swiss-Prot
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 2.228e-57
Identity = 109/132 (82.58%), Postives = 115/132 (87.12%), Query Frame = 1 
Query:  253 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVFQQAQSGTGKTATFCSGILQQLDYGLVPCQGLVMGPPKGTTQQIGKRREALG 648
            MAGLAPEGSQFDARQYD KM ELL T+ ++FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV QQAQSGTGKTATFCSG+LQQLDY LV CQ LV+ P +   QQI K   ALG
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALG 132
[Close]
BLAST of EY665263 vs. ExPASy Swiss-Prot
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 2.228e-57
Identity = 109/132 (82.58%), Postives = 115/132 (87.12%), Query Frame = 1 
Query:  253 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVFQQAQSGTGKTATFCSGILQQLDYGLVPCQGLVMGPPKGTTQQIGKRREALG 648
            MAGLAPEGSQFDARQYD KM ELL T+ ++FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV QQAQSGTGKTATFCSG+LQQLDY LV CQ LV+ P +   QQI K   ALG
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALG 132
[Close]
BLAST of EY665263 vs. ExPASy Swiss-Prot
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 2.228e-57
Identity = 109/132 (82.58%), Postives = 115/132 (87.12%), Query Frame = 1 
Query:  253 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVFQQAQSGTGKTATFCSGILQQLDYGLVPCQGLVMGPPKGTTQQIGKRREALG 648
            MAGLAPEGSQFDARQYD KM ELL T+ ++FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV QQAQSGTGKTATFCSG+LQQLDY LV CQ LV+ P +   QQI K   ALG
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALG 132
[Close]
BLAST of EY665263 vs. ExPASy Swiss-Prot
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 2.228e-57
Identity = 110/132 (83.33%), Postives = 115/132 (87.12%), Query Frame = 1 
Query:  253 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVFQQAQSGTGKTATFCSGILQQLDYGLVPCQGLVMGPPKGTTQQIGKRREALG 648
            MAGLAPEGSQFDARQYD KM ELL T+ Q+FFTSYDEVY+SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV QQAQSGTGKTATFCSGILQQLDY LV CQ LV+ P +   QQI K   ALG
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQQEFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTRELAQQIEKVMRALG 132
[Close]
BLAST of EY665263 vs. ExPASy Swiss-Prot
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 2.228e-57
Identity = 109/132 (82.58%), Postives = 115/132 (87.12%), Query Frame = 1 
Query:  253 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVFQQAQSGTGKTATFCSGILQQLDYGLVPCQGLVMGPPKGTTQQIGKRREALG 648
            MAGLAPEGSQFDARQYD KM ELL T+ ++FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV QQAQSGTGKTATFCSG+LQQLDY LV CQ LV+ P +   QQI K   ALG
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALG 132
[Close]
BLAST of EY665263 vs. ExPASy Swiss-Prot
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.886e-56
Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 1 
Query:  253 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVFQQAQSGTGKTATFCSGILQQLDYGLVPCQGLVMGPPKGTTQQIGKRREALG 648
            MAG APEGSQFDARQYD+KM ELL+ +GQDFFTSYDEVY SFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV QQAQSGTGKTATFCSGILQQLDY L+ CQ LV+ P +   QQI K   ALG
Sbjct:    1 MAGAAPEGSQFDARQYDSKMTELLNAEGQDFFTSYDEVYHSFDAMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYELLDCQALVLAPTRELAQQIEKVMRALG 132
[Close]
BLAST of EY665263 vs. ExPASy Swiss-Prot
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 3.217e-56
Identity = 107/132 (81.06%), Postives = 114/132 (86.36%), Query Frame = 1 
Query:  253 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVFQQAQSGTGKTATFCSGILQQLDYGLVPCQGLVMGPPKGTTQQIGKRREALG 648
            MAG APEGSQFDARQ+D KM ELL T+ ++FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV QQAQSGTGKTATFCSG+LQQLDY LV CQ LV+ P +   QQI K   ALG
Sbjct:    1 MAGSAPEGSQFDARQFDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALG 132
[Close]
BLAST of EY665263 vs. ExPASy Swiss-Prot
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 5.136e-54
Identity = 105/133 (78.95%), Postives = 114/133 (85.71%), Query Frame = 1 
Query:  253 MAGLAPEGSQFDARQYDTKMNELLST-DGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVFQQAQSGTGKTATFCSGILQQLDYGLVPCQGLVMGPPKGTTQQIGKRREALG 648
            MAG+APEGSQFDA+ YD+KM ELL   D ++FFTSYDEV++SFD MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV QQAQSGTGKTATFCSGILQQLDYGLV CQ LV+ P +   QQI K   ALG
Sbjct:    1 MAGMAPEGSQFDAKHYDSKMQELLHQGDNEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALG 133
The following BLAST results are available for this feature:
BLAST of EY665263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
IF4A8_TOBAC2.631e-5883.33Eukaryotic initiation factor 4A-8 OS=Nicotiana tab... [more]
IF415_TOBAC2.631e-5884.85Eukaryotic initiation factor 4A-15 OS=Nicotiana ta... [more]
IF4A7_TOBAC2.228e-5782.58Eukaryotic initiation factor 4A-7 OS=Nicotiana tab... [more]
IF414_TOBAC2.228e-5782.58Eukaryotic initiation factor 4A-14 OS=Nicotiana ta... [more]
IF413_TOBAC2.228e-5782.58Eukaryotic initiation factor 4A-13 (Fragment) OS=N... [more]
IF411_TOBAC2.228e-5783.33Eukaryotic initiation factor 4A-11 OS=Nicotiana ta... [more]
IF410_TOBAC2.228e-5782.58Eukaryotic initiation factor 4A-10 OS=Nicotiana ta... [more]
IF4A9_TOBAC1.886e-5681.82Eukaryotic initiation factor 4A-9 OS=Nicotiana tab... [more]
IF4A2_NICPL3.217e-5681.06Eukaryotic initiation factor 4A-2 OS=Nicotiana plu... [more]
IF4A3_ORYSJ5.136e-5478.95Eukaryotic initiation factor 4A-3 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665263 ID=EY665263; Name=EY665263; organism=Citrus sinensis; type=EST; length=1036bp
TAGTAATTAAAAGGGGGGACGTCGTACGGTCGGGAATTCCGGGTCGACCA
CGCGTCCGGGCCCCGTATATATATAAGTGCTGCAAAGACCAAACTTTAGT
CCCTTCCCTTTTAACTCCACGGCGCAGATCCGAGGAGTTTGGTAACCCTA
GCAACTATTTTCTCTTAAATCAATCTTCTCCTTCTCTTTGAAGAAAAAAG
AAAACCAACTCTTTCTCTCGATTTTAATCACCATCATCAAAGCTTTGCAG
ATATGGCTGGTTTGGCACCCGAAGGATCTCAATTTGATGCTCGTCAGTAT
GACACCAAGATGAATGAACTGCTCTCTACTGATGGGCAAGATTTCTTCAC
TTCTTATGATGAAGTTTATGACAGTTTTGATGCAATGGGACTGCAGGAAA
ACCTTTTGAGGGGAATCTATGCCTATGGGTTTGAGAAGCCCTCTGCTATT
CAGCAAAGGGGAATTGTTCCCTTCTGCAAGGGACTTGACGTCTTTCAGCA
GGCTCAGTCTGGAACTGGGAAAACAGCAACTTTCTGCTCTGGAATTTTGC
AGCAACTTGATTATGGTCTTGTCCCATGTCAGGGCCTGGTAATGGGACCC
CCCAAGGGAACTACTCAACAGATTGGGAAAAGAAGGGAGGCCCTTGGGGG
ATAATCTTGGGGGTTAGGGTTCAGGGTGGGTGCCGGGGGGAAAAGGGGTT
CCGAGGGAATAAGCGCATTCTTCCAGGTGGGGGTTAAGGGTGTGGTGGGG
CCCCCGGGGGCCGGGGGTTTGAAATGGGGGGGCCCCAAAGGTTTTTTTAC
CCCCCCGGGTTTATATTTAAAAAAGTTTTGTAACGGGGAGTGGAGAGGGA
AAGAAAATGGGGTTTTCCCCGGGGGTTTTTTTAAGGGAAATACAAAAAAT
ATGGAAATTTTTTCCCCCGGGCGCCCTCTCCCCCCAACAATAAAATTTTG
CGGGGGGGGGGGGGGGGTGTTTTTTCCCTCTGCGCCCAAACAAAAGGGGG
GCCCCCCCCCCGGGGGGAGGGGGCGCCTGGGGAGGG
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