FC871861

Overview
NameFC871861
Unique NameFC871861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8114 contig Csv1_Contig8114:10..799. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC871861 vs. ExPASy Swiss-Prot
Match: ALDH_LINUS (Probable aldehyde dehydrogenase OS=Linum usitatissimum GN=FIS1 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.964e-58
Identity = 106/134 (79.10%), Postives = 120/134 (89.55%), Query Frame = 2 
Query:  386 RSAHTLPFATLEAGEISGSKPGEVYNLVQGKWTGSSNWSTLLDPLNGEQFIRIAEVGEKEIQPFVESLSKCPKHGLHNPFKSPERYLLYGDISTKAAHMLSLPKVSNFFTRLIQRVSPKSYQQALGEVQVTQKF 787
            R +H+LPFAT++A E+SG+KP EV NLVQG W GSS+W T++DPLNGE FI++AEV E EI+PFVESLSKCPKHGLHNPFKSPERYLLYGDISTKA HMLS+PKVS FF RLIQRV+PKSY QALGEVQVTQKF
Sbjct:   26 RFSHSLPFATVDAEELSGAKPAEVLNLVQGNWGGSSSWHTVVDPLNGEPFIKVAEVDETEIKPFVESLSKCPKHGLHNPFKSPERYLLYGDISTKAGHMLSIPKVSEFFARLIQRVAPKSYHQALGEVQVTQKF 159
[Close]
BLAST of FC871861 vs. ExPASy Swiss-Prot
Match: AL121_ARATH (Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial OS=Arabidopsis thaliana GN=ALDH12A1 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.166e-54
Identity = 102/136 (75.00%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:  383 SRSAHTLPFATLEAGEISGSKPGEVYNLVQGKWTGSSNWSTLLDPLNGEQFIRIAEVGEKEIQPFVESLSKCPKHGLHNPFKSPERYLLYGDISTKAAHMLSLPKVSNFFTRLIQRVSPKSYQQALGEVQVTQKFL 790
            SR  H++PFAT++A E+SG+ P EV + VQGKW GSSN +TLLDPLNGE FI++AEV E   QPFV+SLS+CPKHGLHNPFKSPERYLLYGDISTKAAHML+LPKV++FF RLIQRV+PKSYQQA GEV VT+KFL
Sbjct:   29 SRLNHSIPFATVDAEELSGAHPAEVQSFVQGKWIGSSNHNTLLDPLNGEPFIKVAEVDESGTQPFVDSLSQCPKHGLHNPFKSPERYLLYGDISTKAAHMLALPKVADFFARLIQRVAPKSYQQAAGEVFVTRKFL 164
The following BLAST results are available for this feature:
BLAST of FC871861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ALDH_LINUS2.964e-5879.10Probable aldehyde dehydrogenase OS=Linum usitatiss... [more]
AL121_ARATH1.166e-5475.00Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK3CB10FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3CB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871861 ID=FC871861; Name=FC871861; organism=Citrus sinensis; type=EST; length=790bp
GGGAAAGGATTTCGTGGCTTGGCTTCCTTTGGAATTTCAACTGTATTCCT
TGCGGAAGCATTTTCTGTTTGTTCTGGCCATCACCGAGACCAAGTTTTTA
ACTGTTATGCAAATGCAATCAATTCATTGTATTCTCTTGCTCGATTCTTT
TGAGAATTGATGTTCAATATACTTGGTGATGATGGTGTATATATCGGTTG
AACTTATTGATCCTCCAATCGGATTTTTTTCCCTTATATTTTACTATACA
TGAGTCTATGATTTTAGCGGCTGTCTGAAGTTTGGATGCTTAAGATTCTG
GCATTCTCTTTGTGGAGTTACTATGTGTACCATTATGGTTCTTCAATGAC
GTGTTTCTTTGATTTTTCTCATTTCTCTGTATAGCAGATCAGCTCATACT
TTACCTTTTGCTACATTAGAGGCAGGCGAAATATCAGGTTCTAAACCTGG
TGAAGTGTACAATTTGGTGCAGGGTAAGTGGACAGGATCATCAAATTGGA
GTACGTTATTAGATCCATTAAATGGAGAACAATTCATTAGAATTGCTGAA
GTGGGTGAAAAAGAAATCCAGCCATTTGTAGAGAGCTTGTCCAAGTGCCC
TAAACATGGTCTGCACAATCCCTTTAAATCACCAGAGAGATATCTTTTAT
ATGGAGATATATCTACAAAGGCAGCCCACATGCTTTCACTGCCAAAGGTC
TCCAATTTCTTCACTAGGTTGATTCAGAGGGTTTCTCCTAAGAGTTATCA
GCAGGCTCTCGGCGAGGTTCAAGTTACACAGAAATTCCTT
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