CV884311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884311 vs. ExPASy Swiss-Prot
Match: DEGS1_RAT (Sphingolipid delta(4)-desaturase DES1 OS=Rattus norvegicus GN=Degs1 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 8.974e-59 Identity = 100/193 (51.81%), Postives = 134/193 (69.43%), Query Frame = -2 Query: 284 HHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPSATKKSE 862 HHR+ G DGID+DIP+ E + K +WVI Q LFYAFRP+F+ PKP + E IN IQ+ D+ + Y +G KS Y++ ++ +G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP +PG L VR++A EYY L Y SW +V+Y ++MD T+ P+SRMKR P + E Sbjct: 131 HHRYLGADGIDVDIPTDFEGWFFCTTLRKLVWVILQPLFYAFRPLFINPKPITHLEVINTVIQVTFDVLVYYVFGVKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNVPGKNLPLVRKIASEYYDNLPHYNSWIRVLYDFVMDDTISPYSRMKRPPKGNEIQE 323
BLAST of CV884311 vs. ExPASy Swiss-Prot
Match: DEGS1_PONAB (Sphingolipid delta(4)-desaturase DES1 OS=Pongo abelii GN=DEGS1 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.611e-58 Identity = 102/184 (55.43%), Postives = 129/184 (70.11%), Query Frame = -2 Query: 311 HHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKR 862 HHR+ G DG+D+DIP+ E K IWVI Q LFYAFRP+F+ PKP Y E IN Q+ DI I YF G KS Y++ ++ +G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP IPG L VR++A EYY L Y SW +V+Y ++MD T+ P+SRMKR Sbjct: 131 HHRYLGADGVDVDIPTDFEGWFFCTAFRKFIWVILQPLFYAFRPLFINPKPITYLEVINTVAQVTFDILIYYFLGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEYYDNLPHYNSWIKVLYDFVMDDTISPYSRMKR 314
BLAST of CV884311 vs. ExPASy Swiss-Prot
Match: DEGS1_MICFO (Sphingolipid delta(4)-desaturase DES1 OS=Microtus fortis GN=DEGS1 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.611e-58 Identity = 101/190 (53.16%), Postives = 132/190 (69.47%), Query Frame = -2 Query: 293 HHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPSATK 862 HHR+ G DGID+DIP+ E K +WVI Q LFYA RP+F+ PKP Y E IN QI LDI + Y +G KS Y++ ++ +G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP +PG L VR++A EYY L Y SW +V+Y ++MD T+ P+SRMKR P ++ Sbjct: 131 HHRYLGADGIDVDIPTDFEGWFFCTTFRKLVWVILQPLFYALRPLFINPKPITYLEIINTVTQIILDIIVYYVFGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNVPGKNLPLVRKIAAEYYDKLPQYNSWIKVLYDFVMDDTISPYSRMKRPPKGSE 320
BLAST of CV884311 vs. ExPASy Swiss-Prot
Match: DEGS1_HUMAN (Sphingolipid delta(4)-desaturase DES1 OS=Homo sapiens GN=DEGS1 PE=1 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.611e-58 Identity = 102/184 (55.43%), Postives = 129/184 (70.11%), Query Frame = -2 Query: 311 HHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKR 862 HHR+ G DG+D+DIP+ E K IWVI Q LFYAFRP+F+ PKP Y E IN Q+ DI I YF G KS Y++ ++ +G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP IPG L VR++A EYY L Y SW +V+Y ++MD T+ P+SRMKR Sbjct: 131 HHRYLGADGVDVDIPTDFEGWFFCTAFRKFIWVILQPLFYAFRPLFINPKPITYLEVINTVAQVTFDILIYYFLGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEYYDNLPHYNSWIKVLYDFVMDDTISPYSRMKR 314
BLAST of CV884311 vs. ExPASy Swiss-Prot
Match: DEGS1_MOUSE (Sphingolipid delta(4)-desaturase DES1 OS=Mus musculus GN=Degs1 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.410e-58 Identity = 102/190 (53.68%), Postives = 130/190 (68.42%), Query Frame = -2 Query: 293 HHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPSATK 862 HHR+ G D ID+DIP+ E K +WVI Q LFYAFRP+F+ PKP Y E IN IQI DI I Y +G KS Y++ +T +G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP +PG L VR++A EYY L Y SW +V+Y ++ D T+ P+SRMKR P + Sbjct: 131 HHRYLGADKIDVDIPTDFEGWFFCTTFRKFVWVILQPLFYAFRPLFINPKPITYLEIINTVIQITFDIIIYYVFGVKSLVYMLAATLLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNVPGKNLPMVRKIASEYYDDLPHYNSWIKVLYDFVTDDTISPYSRMKRPPKGNE 320
BLAST of CV884311 vs. ExPASy Swiss-Prot
Match: DEGS1_BOVIN (Sphingolipid delta(4)-desaturase DES1 OS=Bos taurus GN=DEGS1 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 9.922e-58 Identity = 102/184 (55.43%), Postives = 127/184 (69.02%), Query Frame = -2 Query: 311 HHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKR 862 HHR+ G DGID+DIP+ E K IWVI Q LFYAFRP+F+ PKP Y E IN IQI DI + Y G KS Y++ ++ G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP IPG L VR++A EYY L Y SW +V+Y ++ D T+ P+SRMKR Sbjct: 131 HHRYLGADGIDVDIPTDFEGWFFCTTFRKFIWVILQPLFYAFRPLFINPKPISYLEIINTVIQITFDIVVYYVLGVKSLVYMLAASLFGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEYYDNLPHYNSWIKVLYDFVTDDTISPYSRMKR 314
BLAST of CV884311 vs. ExPASy Swiss-Prot
Match: DEGS1_CHICK (Sphingolipid delta(4)-desaturase DES1 OS=Gallus gallus GN=DEGS1 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.020e-55 Identity = 97/193 (50.26%), Postives = 127/193 (65.80%), Query Frame = -2 Query: 284 HHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPSATKKSE 862 HHR+ G DGID+DIP+ E K IW++ Q FYA RP+ + PKP E IN Q+ DI I Y WG KS Y++ + +G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP IPG L V+++A EYY L Y SW +V+Y ++MD T+ P+SRMKR+ K + Sbjct: 131 HHRYLGGDGIDVDIPTNFEGWFFCTRFRKFIWIVLQPFFYAIRPLCINPKPITRLEIINLLAQLFFDIVIYYLWGAKSIFYMLAGSVLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVKKIAAEYYDNLPQYNSWIKVLYDFVMDDTISPYSRMKRQLKGEVKQD 323
BLAST of CV884311 vs. ExPASy Swiss-Prot
Match: DEGS1_XENTR (Sphingolipid delta(4)-desaturase DES1 OS=Xenopus tropicalis GN=degs1 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 6.655e-54 Identity = 95/193 (49.22%), Postives = 129/193 (66.84%), Query Frame = -2 Query: 284 HHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPSATKKSE 862 HHR+ G DG+D+DIP+ E + K +W+I Q LFY RP+ + PKP E IN +Q + D I Y G K+ Y+++ + +G G+HP++GHFI+EHY+F ETYSYYGPLN+LT++VGYHNEHHDFP +PG L VR++A EYY L Y SW +V+Y ++MD T+ P+SRMKRK K E Sbjct: 131 HHRYLGGDGVDVDIPTDFEGWFFCTPLRKLVWIILQPLFYTIRPLCINPKPITRLEIINLVVQFSFDALIYYTLGGKALFYMLVGSILGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNYLTFNVGYHNEHHDFPSVPGKNLPLVRKIAAEYYDPLPKYSSWVKVLYDFVMDDTLSPYSRMKRKLKGDLKLE 323
BLAST of CV884311 vs. ExPASy Swiss-Prot
Match: DEGS2_RAT (Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2 OS=Rattus norvegicus GN=Degs2 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.004e-50 Identity = 87/190 (45.79%), Postives = 129/190 (67.89%), Query Frame = -2 Query: 293 HHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPSATK 862 HHR+ G DG+D+DIP+ E K +W++ Q FY+ RP+++ PK E +N +Q+A ++TI WG K+ YL+ S+ +G G+HP++GHF++EHY+F ETYSYYGPLN++T++VGYH EHHDFP IPG L VR +APEYY L + SW +V++ ++ + ++GP+SR+KRK K Sbjct: 131 HHRYLGGDGLDVDIPTDFEGWFFCTPARKLLWLVLQPFFYSLRPLYVNPKAVTRMEILNALVQLAFNVTIFALWGIKAIVYLLASSLLGLGLHPISGHFVAEHYMFLKGHETYSYYGPLNWITFNVGYHVEHHDFPSIPGCYLPLVRMIAPEYYDHLPQHHSWVKVLWDFVFEDSLGPYSRVKRKCKLAK 320
BLAST of CV884311 vs. ExPASy Swiss-Prot
Match: DEGS2_MOUSE (Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2 OS=Mus musculus GN=Degs2 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.004e-50 Identity = 88/190 (46.32%), Postives = 128/190 (67.37%), Query Frame = -2 Query: 293 HHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPSATK 862 HHR+ G DG+D+DIP+ E K +W++ Q FY+ RP+ + PK E +N +Q+A D+TI WG K YL+ S+ +G G+HP++GHF++EHY+F ETYSYYGPLN++T++VGYH EHHDFP IPG L VR++APEYY L + SW +V++ ++ + ++GP+SR+KRK K Sbjct: 131 HHRYLGGDGLDVDIPTNFEGWFFCTPARKLLWLVLQPFFYSLRPLCVNPKVVTRMEILNALVQLAFDVTIFALWGIKPIVYLLGSSLLGLGLHPISGHFVAEHYMFLKGHETYSYYGPLNWITFNVGYHMEHHDFPSIPGYYLPLVRKIAPEYYDHLPQHHSWVKVLWDFVFEDSMGPYSRVKRKCKLAK 320 The following BLAST results are available for this feature:
BLAST of CV884311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884311 ID=CV884311; Name=CV884311; organism=Citrus sinensis; type=EST; length=863bpback to top |