CV884310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884310 vs. ExPASy Swiss-Prot
Match: DEGS1_HUMAN (Sphingolipid delta(4)-desaturase DES1 OS=Homo sapiens GN=DEGS1 PE=1 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 4.624e-85 Identity = 145/279 (51.97%), Postives = 193/279 (69.18%), Query Frame = 3 Query: 75 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFST--PAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEY 905 V DF W YTD+PHA RRR+IL++YP+IK L PDP + ++VL QL ++ D W ++ AY FGS +NH++ LAIHE++HN AF +NRW G+ ANLP+G+P S++F++YH++HHR+ G DG+D+DIP+ E K IWVI Q LFYAFRP+F+ PKP Y E IN Q+ DI I YF G KS Y++ ++ +G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP IPG L VR++A EY Sbjct: 5 VSREDFEWVYTDQPHADRRREILAKYPEIKSLMKPDPNLIWIIIMMVLTQLGAFYIVKDLDWKWVIFGAYAFGSCINHSMTLAIHEIAHNAAFGNCKAMWNRWFGMFANLPIGIPYSISFKRYHMDHHRYLGADGVDVDIPTDFEGWFFCTAFRKFIWVILQPLFYAFRPLFINPKPITYLEVINTVAQVTFDILIYYFLGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEY 283
BLAST of CV884310 vs. ExPASy Swiss-Prot
Match: DEGS1_MICFO (Sphingolipid delta(4)-desaturase DES1 OS=Microtus fortis GN=DEGS1 PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 1.030e-84 Identity = 145/279 (51.97%), Postives = 192/279 (68.82%), Query Frame = 3 Query: 75 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFS--TPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEY 905 V +F W YTD+PH RRR+IL++YP+IK L PDP +T + L+QL + L+ D W ++ +Y FGS LNH++ LAIHE+SHN F +NRW GI ANLP+GVP SV+F++YH++HHR+ G DGID+DIP+ E K +WVI Q LFYA RP+F+ PKP Y E IN QI LDI + Y +G KS Y++ ++ +G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP +PG L VR++A EY Sbjct: 5 VSREEFEWVYTDQPHTDRRREILAKYPEIKSLMKPDPNLIWIITAMFLVQLISLYLVKDLDWKWVIFWSYVFGSCLNHSMTLAIHEISHNFPFGHHKAVWNRWFGIFANLPIGVPYSVSFKRYHMDHHRYLGADGIDVDIPTDFEGWFFCTTFRKLVWVILQPLFYALRPLFINPKPITYLEIINTVTQIILDIIVYYVFGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNVPGKNLPLVRKIAAEY 283
BLAST of CV884310 vs. ExPASy Swiss-Prot
Match: DEGS1_BOVIN (Sphingolipid delta(4)-desaturase DES1 OS=Bos taurus GN=DEGS1 PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 1.030e-84 Identity = 150/279 (53.76%), Postives = 191/279 (68.46%), Query Frame = 3 Query: 75 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFS--TPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEY 905 V DF W YTD+PHA+RR++IL++YP+IK L PD V ++VL Q L+ D W +L AY FGS +NH++ LAIHE+SHN AF +NRW GI ANLP+GVP SV+F++YH++HHR+ G DGID+DIP+ E K IWVI Q LFYAFRP+F+ PKP Y E IN IQI DI + Y G KS Y++ ++ G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP IPG L VR++A EY Sbjct: 5 VSREDFEWVYTDQPHATRRQEILAKYPEIKSLMKPDSNLIWIVIMMVLTQFVAFYLVKDLDWKWVLFWAYAFGSCVNHSMTLAIHEVSHNSAFGHYKAMWNRWFGIFANLPIGVPYSVSFKRYHMDHHRYLGADGIDVDIPTDFEGWFFCTTFRKFIWVILQPLFYAFRPLFINPKPISYLEIINTVIQITFDIVVYYVLGVKSLVYMLAASLFGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEY 283
BLAST of CV884310 vs. ExPASy Swiss-Prot
Match: DEGS1_PONAB (Sphingolipid delta(4)-desaturase DES1 OS=Pongo abelii GN=DEGS1 PE=2 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 1.345e-84 Identity = 145/279 (51.97%), Postives = 191/279 (68.46%), Query Frame = 3 Query: 75 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFST--PAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEY 905 V DF W YTD+PHA RRR+IL++YP+IK L PDP + ++VL QL ++ D W ++ AY FGS +NH++ L IHE++HN AF +NRW G+ ANLP+G+P SV+F+ YH++HHR+ G DG+D+DIP+ E K IWVI Q LFYAFRP+F+ PKP Y E IN Q+ DI I YF G KS Y++ ++ +G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP IPG L VR++A EY Sbjct: 5 VSREDFEWVYTDQPHADRRREILAKYPEIKSLMKPDPNLIWIIIMMVLTQLAAFYIVKDLDWKWVIFGAYAFGSCINHSMTLGIHEIAHNAAFGNCKAMWNRWFGMFANLPIGIPYSVSFKSYHMDHHRYLGADGVDVDIPTDFEGWFFCTAFRKFIWVILQPLFYAFRPLFINPKPITYLEVINTVAQVTFDILIYYFLGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEY 283
BLAST of CV884310 vs. ExPASy Swiss-Prot
Match: DEGS1_RAT (Sphingolipid delta(4)-desaturase DES1 OS=Rattus norvegicus GN=Degs1 PE=2 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 5.652e-83 Identity = 141/279 (50.54%), Postives = 196/279 (70.25%), Query Frame = 3 Query: 75 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFS--TPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEY 905 V +F W YTD+PHA+RR++IL++YP+IK L PDP VT ++L+QL + L+ D W ++ +Y FGS LNH++ LAIHE+SHN F +NRW G+ ANL +GVP S++F++YH++HHR+ G DGID+DIP+ E + K +WVI Q LFYAFRP+F+ PKP + E IN IQ+ D+ + Y +G KS Y++ ++ +G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP +PG L VR++A EY Sbjct: 5 VSREEFEWVYTDQPHAARRQEILAKYPEIKSLMKPDPNLIWIVTSMLLVQLASFYLVKDLDWKWLMFWSYAFGSCLNHSMTLAIHEISHNFPFGHHKAMWNRWFGMFANLSLGVPYSISFKRYHMDHHRYLGADGIDVDIPTDFEGWFFCTTLRKLVWVILQPLFYAFRPLFINPKPITHLEVINTVIQVTFDVLVYYVFGVKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNVPGKNLPLVRKIASEY 283
BLAST of CV884310 vs. ExPASy Swiss-Prot
Match: DEGS1_MOUSE (Sphingolipid delta(4)-desaturase DES1 OS=Mus musculus GN=Degs1 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.645e-82 Identity = 143/279 (51.25%), Postives = 193/279 (69.18%), Query Frame = 3 Query: 75 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFS--TPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEY 905 V +F W YTD+PHA+RR++IL++YP+IK L PD V +++L+QL + L+ D W ++ +Y FGS LNH++ LAIHE+SHN F +NRW G+ ANL +GVP S++F++YH++HHR+ G D ID+DIP+ E K +WVI Q LFYAFRP+F+ PKP Y E IN IQI DI I Y +G KS Y++ +T +G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP +PG L VR++A EY Sbjct: 5 VSREEFEWVYTDQPHAARRKEILAKYPEIKSLMKPDHNLIWIVAMMLLVQLASFYLVKDLDWKWVIFWSYVFGSCLNHSMTLAIHEISHNFPFGHHKALWNRWFGMFANLSLGVPYSISFKRYHMDHHRYLGADKIDVDIPTDFEGWFFCTTFRKFVWVILQPLFYAFRPLFINPKPITYLEIINTVIQITFDIIIYYVFGVKSLVYMLAATLLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNVPGKNLPMVRKIASEY 283
BLAST of CV884310 vs. ExPASy Swiss-Prot
Match: DEGS2_HUMAN (Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2 OS=Homo sapiens GN=DEGS2 PE=2 SV=2) HSP 1 Score: 295.434 bits (755), Expect = 2.903e-79 Identity = 136/276 (49.28%), Postives = 187/276 (67.75%), Query Frame = 3 Query: 84 ADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFST--PAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEY 905 +DF W YTD+PH RR++IL++YP IK L PDP V V+VL+Q+ L+ W +L AY FG +NH+L LAIH++SHN AF T A NRWL + ANLPVGVP + +F+KYH++HHR+ G DG+D+D+P+ E K +W++ Q FY+ RP+ + PK E +N +Q+A D+ I WG K YL+ S+F+G G+HP++GHF++EHY+F ETYSYYGPLN++T++VGYH EHHDFP IPG L VR++APEY Sbjct: 8 SDFEWVYTDQPHTQRRKEILAKYPAIKALMRPDPRLKWAVLVLVLVQMLACWLVRGLAWRWLLFWAYAFGGCVNHSLTLAIHDISHNAAFGTGRAARNRWLAVFANLPVGVPYAASFKKYHVDHHRYLGGDGLDVDVPTRLEGWFFCTPARKLLWLVLQPFFYSLRPLCVHPKAVTRMEVLNTLVQLAADLAIFALWGLKPVVYLLASSFLGLGLHPISGHFVAEHYMFLKGHETYSYYGPLNWITFNVGYHVEHHDFPSIPGYNLPLVRKIAPEY 283
BLAST of CV884310 vs. ExPASy Swiss-Prot
Match: DEGS1_CHICK (Sphingolipid delta(4)-desaturase DES1 OS=Gallus gallus GN=DEGS1 PE=2 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 8.447e-79 Identity = 138/279 (49.46%), Postives = 186/279 (66.67%), Query Frame = 3 Query: 75 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFST--PAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEY 905 V DF W YTD+PHA RR++IL+++P+IK L PD V ++V QL L+ D W ++ AY FGS ++H++ LAIHE+SHN AF +NRW GI ANLP+G+P S++F++YH++HHR+ G DGID+DIP+ E K IW++ Q FYA RP+ + PKP E IN Q+ DI I Y WG KS Y++ + +G G+HP++GHFI+EHY+F ETYSYYGPLN LT++VGYHNEHHDFP IPG L V+++A EY Sbjct: 5 VAREDFEWVYTDQPHADRRKEILAKHPEIKALMKPDYNLIWVVMLMVAAQLTAFYLVRDLDWKWVVFWAYVFGSCISHSMTLAIHEISHNSAFGNGRAMWNRWFGIFANLPLGLPYSISFKRYHMDHHRYLGGDGIDVDIPTNFEGWFFCTRFRKFIWIVLQPFFYAIRPLCINPKPITRLEIINLLAQLFFDIVIYYLWGAKSIFYMLAGSVLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVKKIAAEY 283
BLAST of CV884310 vs. ExPASy Swiss-Prot
Match: DEGS2_BOVIN (Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2 OS=Bos taurus GN=DEGS2 PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 3.210e-78 Identity = 134/276 (48.55%), Postives = 182/276 (65.94%), Query Frame = 3 Query: 84 ADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFST--PAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEY 905 +DF W YTD+PH RR+++L++YP IK L PDP+ VT +VL QL L W + AY FG +NH+L LAIH++SHN AF T P+ NRW I ANLPVG+P + +F+KYH++HHR+ G DG+D+D+P+ E R+ K +W+ Q FY RP+ + PK E N +Q+A D TI WG K YL+ S+ +G G+HP++GHF++EHY+F ETYSYYGPLN++T++VGYH EHHDFP IP L VR++APEY Sbjct: 8 SDFEWVYTDQPHTQRRKEMLAKYPAIKALMRPDPYLKWTVTAMVLAQLLACWLAQGLAWRWLFFWAYAFGGCVNHSLTLAIHDISHNTAFGTGRPSRNRWFAIFANLPVGLPYAASFKKYHVDHHRYLGGDGLDVDVPTYFEGRLFCTPARKLLWLALQPFFYTLRPLCVHPKAMTRMELCNTLVQLAADATIYALWGLKPMVYLLASSLLGLGLHPISGHFVAEHYMFLKGHETYSYYGPLNWITFNVGYHMEHHDFPSIPSCNLPLVRKIAPEY 283
BLAST of CV884310 vs. ExPASy Swiss-Prot
Match: DEGS1_XENTR (Sphingolipid delta(4)-desaturase DES1 OS=Xenopus tropicalis GN=degs1 PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.349e-76 Identity = 134/275 (48.73%), Postives = 187/275 (68.00%), Query Frame = 3 Query: 87 DFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAF--STPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEY 905 DF W YTD+PHA RR++IL++YP+IK L PD V+++VL QL L+ D W +L Y GS ++H++ LAIHE+SHN AF S +NR G+ ANLP+G+P SV+F++YH++HHR+ G DG+D+DIP+ E + K +W+I Q LFY RP+ + PKP E IN +Q + D I Y G K+ Y+++ + +G G+HP++GHFI+EHY+F ETYSYYGPLN+LT++VGYHNEHHDFP +PG L VR++A EY Sbjct: 9 DFEWVYTDQPHADRRKEILAKYPEIKSLMKPDHNLIWIVSLMVLTQLVAFYLVKDLDWKWLLFWTYVVGSCISHSMTLAIHEISHNSAFGNSKAMWNRCFGMFANLPLGLPYSVSFKRYHMDHHRYLGGDGVDVDIPTDFEGWFFCTPLRKLVWIILQPLFYTIRPLCINPKPITRLEIINLVVQFSFDALIYYTLGGKALFYMLVGSILGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNYLTFNVGYHNEHHDFPSVPGKNLPLVRKIAAEY 283 The following BLAST results are available for this feature:
BLAST of CV884310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884310 ID=CV884310; Name=CV884310; organism=Citrus sinensis; type=EST; length=906bpback to top |