EY720247

Overview
NameEY720247
Unique NameEY720247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720247 vs. ExPASy Swiss-Prot
Match: TPS7_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 1.273e-84
Identity = 153/226 (67.70%), Postives = 180/226 (79.65%), Query Frame = 1
Query:   10 GLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPRFGSSQAKELLDHLESVLANEPAAVKSGQFIGKSKGTGWSQGCGGRKNLHNNGRQWGGMPI-LYLCIG 684
            G+SFGFRVVALDPNFRKLSI  IVS Y R+KSRAIL DYDGT+MPQ SINKAPSQ V++ ++ LC D +N++F+VSGRGR+ L KWF+PCKK+GIAAEHGYF++WS  EEW+ CGQS DFGW+QI EPVMK YTESTDGS IEIKESALVW +RDADP FGS QAKE+L+HLESVLANEP AVKSG +I + K  G S+G    K   +   +  G P+   LCIG
Sbjct:  554 GISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDYDGTLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEHGYFLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGFGSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGK--GKPVDFVLCIG 777          
BLAST of EY720247 vs. ExPASy Swiss-Prot
Match: TPS6_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2)

HSP 1 Score: 264.618 bits (675), Expect = 5.191e-70
Identity = 139/227 (61.23%), Postives = 166/227 (73.13%), Query Frame = 1
Query:   10 GLSFG--FRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPRFGSSQAKELLDHLESVLANEPAAVKSGQFIGKSKGTGWSQGCGGRKNLHNNGRQWGGMPILYLCIG 684
            G+ FG  FRVVALD +FRKLS++ IVSAY R+K+RAIL DYD T+MPQ SI+K PS   I I+NTLC D  N VF+VS + R+ L  WFSPC+KLGIAAEHGYF+R     EW+NC  +VD  W QIAEPVM+LYTE+TDGS IE KE+ALVW + DADP FGS QAKELLDHLESVLANEP  VK GQ   + K  G S+G   R+ L +  ++ G +P   LCIG
Sbjct:  569 GIGFGLSFRVVALDQSFRKLSMEHIVSAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLSDWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIARRML-SMMQERGTLPEFVLCIG 794          
BLAST of EY720247 vs. ExPASy Swiss-Prot
Match: TPS9_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.576e-69
Identity = 129/227 (56.83%), Postives = 163/227 (71.81%), Query Frame = 1
Query:   10 GLSFG--FRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPRFGSSQAKELLDHLESVLANEPAAVKSGQFIGKSKGTGWSQGCGGRKNLHNNGRQWGGMPILYLCIG 684
            G+ FG  FRV++L P+FRKLSID IVS Y  ++ RAI  DYDGT++P++SI K P+  V+S++ +LC D +NTVFVVSGRG + L  W SPC+ LGIAAEHGYF+RWS+ +EW+ C  S +  W  + EPVM+ Y ++TDGS IE KESALVWHH+DADP FG+ QAKELLDHLESVLANEP  VK GQ I + K  G S+G    K +H      G  P + +CIG
Sbjct:  558 GIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYDGTLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHGYFIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDFGACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVED-GNPPDMVMCIG 783          
BLAST of EY720247 vs. ExPASy Swiss-Prot
Match: TPS8_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.279e-68
Identity = 123/225 (54.67%), Postives = 158/225 (70.22%), Query Frame = 1
Query:   10 GLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPRFGSSQAKELLDHLESVLANEPAAVKSGQFIGKSKGTGWSQGCGGRKNLHNNGRQWGGMPILYLCIG 684
            G   GFRV++L P+FRKLS++ IV  Y +++ RAI  DYDGT++P++SI + PS  V+S++  LC D  NTVF+VSGRGR+ L  W SPC+ LGIAAEHGYF+RW + +EW+ C    D  W  + EPVM+ Y E+TDG+ IE KESALVWHH+DADP FGS QAKE+LDHLESVLANEP  VK GQ I + K  G S+G    K +     + G  P + +CIG
Sbjct:  555 GFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDGTLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGYFIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFGSCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVER-GEPPEMVMCIG 778          
BLAST of EY720247 vs. ExPASy Swiss-Prot
Match: TPS10_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.846e-67
Identity = 128/225 (56.89%), Postives = 157/225 (69.78%), Query Frame = 1
Query:   10 GLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPRFGSSQAKELLDHLESVLANEPAAVKSGQFIGKSKGTGWSQGCGGRKNLHNNGRQWGGMPILYLCIG 684
            G   GFR+VAL PNFR+LSI+  VSAY RS  RAI  DYDGT++P+TSI K PS  VIS +  LC+D  NT+F+VSGRG+  L +W +PC+ LGIAAEHGYF RW+   +W+  G S D  W ++ EP+M+LYTE+TDGS IE KESALVWHH+DADP FGS QAKELLDHLE+VL NEP  V  G  I + K  G S+G    K L +   + G  P   +CIG
Sbjct:  560 GWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDGTLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGYFTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFGSCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKIL-SRMLEDGIAPDFVVCIG 783          
BLAST of EY720247 vs. ExPASy Swiss-Prot
Match: TPS11_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.911e-64
Identity = 125/227 (55.07%), Postives = 154/227 (67.84%), Query Frame = 1
Query:   10 GLSFG--FRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPRFGSSQAKELLDHLESVLANEPAAVKSGQFIGKSKGTGWSQGCGGRKNLHNNGRQWGGMPILYLCIG 684
            G+ FG  F+VVALDPNFR+L  + IV AY RS SR IL DYDGT+M Q +++K PS  +IS++N LC+D  N VF+VSGRG+D L KWF  C  LGI+AEHGYF RW+++  W+      D  W +IA+PVM  Y E+TDGS+IE KESA+VWHH++AD  FGS QAKELLDHLESVL NEP  VK GQ I + K  G S+G      +       G  P   LCIG
Sbjct:  550 GVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILLDYDGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWNSNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRNTKGKRPDFLLCIG 776          
BLAST of EY720247 vs. ExPASy Swiss-Prot
Match: TPS5_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 5.384e-59
Identity = 116/225 (51.56%), Postives = 157/225 (69.78%), Query Frame = 1
Query:   10 GLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPRFGSSQAKELLDHLESVLANEPAAVKSGQFIGKSKGTGWSQGCGGRKNLHNNGRQWGGMPILYLCIG 684
            G   GFRVVALDP+F+KLSI+ IVSAY R+K+RAIL DYDGT++   SI   P++  I I+N L +D +N V++VSG+ R  L +WFS C  LG+ AEHGYF+R +   +W+       F W QIAEPVM+LYTE+TDGS IE KE+ALVW+++ ADP FGS QAKEL++HLESVL N+P +VK+GQ + + K  G ++G    + L    ++ G +    LC+G
Sbjct:  560 GFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYDGTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHGYFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDFGSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAER-LLTTMQEKGKLLDFILCVG 783          
BLAST of EY720247 vs. ExPASy Swiss-Prot
Match: TPSA_DICDI (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.689e-28
Identity = 61/162 (37.65%), Postives = 100/162 (61.73%), Query Frame = 1
Query:   55 RKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKA--PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPRFGSSQAKELLDHLESV 534
            +KL I+ +V  Y +SK R ++F YDGT++P  ++ +   PSQ +++  + L ND +  V+++SGR +  L +WF   + +G++AE+G F +     EW+    S+D  W +   P+ K +T  T GS+ E KE    WH+R+ADP FGS QA+EL  HL+++
Sbjct:  486 QKLDIEKVVDIYKQSKRRLLIFAYDGTLIPYNNVPQLSRPSQELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQ-IGLSAEYGCFFKLPESTEWEQQVPSMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQARELHLHLDNL 646          
BLAST of EY720247 vs. ExPASy Swiss-Prot
Match: TPP1_SCHPO (Trehalose-phosphatase OS=Schizosaccharomyces pombe GN=tpp1 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.258e-25
Identity = 58/170 (34.12%), Postives = 90/170 (52.94%), Query Frame = 1
Query:   43 DPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKA--PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPRFGSSQAKELLDHLESVLANE 546
            D     L+ +  +S Y ++  R  + DYDGT+ P      A  PS+ ++  + TL  D +N V+++SGR +  L  W    K LG++AEHG F+R      W N  + +D  W +    + + YT+ T GS IE K  A+ WH+R ADP  G+ QA E    LE ++ ++
Sbjct:  544 DQRIPTLTPEHALSVYSKASKRLFMMDYDGTLTPIVRDPNAAVPSKKLLDNLATLAADPKNQVWIISGRDQQFLRNWMDDIKGLGLSAEHGSFVRKPHSTTWINLAELLDMSWKKEVRRIFQYYTDRTQGSSIEEKRCAMTWHYRKADPENGAFQALECEALLEELVCSK 713          

HSP 2 Score: 25.7942 bits (55), Expect = 3.258e-25
Identity = 13/44 (29.55%), Postives = 25/44 (56.82%), Query Frame = 2
Query:  608 GVVAEKIFTTMADNGEACRFCTSALGDDRSNEDLFENIGNATPV 739
            G+V + + +   D+  +  FC    GDDR++ED+F ++   T +
Sbjct:  736 GIVKQILSSYPEDSLPSFIFCA---GDDRTDEDMFRSLHKNTRI 776          
BLAST of EY720247 vs. ExPASy Swiss-Prot
Match: TPS2_YEAST (Trehalose-phosphatase OS=Saccharomyces cerevisiae GN=TPS2 PE=1 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 1.933e-24
Identity = 63/173 (36.42%), Postives = 93/173 (53.76%), Query Frame = 1
Query:   61 LSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKA--PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS-PCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPRFGSSQAKELLDHLESVLANEPAAVKSGQ 570
            L+   ++  Y ++K R  LFDYDGT+ P      A  PS  + +I+  LC D  N ++++SGR +  L KW      +LG++AEHG FM+  + ++W N  + VD  W      VM+ +T  T GS+IE K+ AL WH+R   P  G   AKEL + L S   +    V  G+
Sbjct:  557 LNRPVLLENYKQAKRRLFLFDYDGTLTPIVKDPAAAIPSARLYTILQKLCADPHNQIWIISGRDQKFLNKWLGGKLPQLGLSAEHGCFMKDVSCQDWVNLTEKVDMSWQVRVNEVMEEFTTRTPGSFIERKKVALTWHYRRTVPELGEFHAKELKEKLLSFTDDFDLEVMDGK 729          
The following BLAST results are available for this feature:
BLAST of EY720247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
TPS7_ARATH1.273e-8467.70Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS6_ARATH5.191e-7061.23Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS9_ARATH2.576e-6956.83Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS8_ARATH1.279e-6854.67Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS10_ARATH1.846e-6756.89Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS11_ARATH1.911e-6455.07Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS5_ARATH5.384e-5951.56Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPSA_DICDI1.689e-2837.65Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPP1_SCHPO3.258e-2534.12Trehalose-phosphatase OS=Schizosaccharomyces pombe... [more]
TPS2_YEAST1.933e-2436.42Trehalose-phosphatase OS=Saccharomyces cerevisiae ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-004-A04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720247 ID=EY720247; Name=EY720247; organism=Citrus sinensis; type=EST; length=875bp
CACGCGTCCGGCTTGAGCTTTGGTTTCAGAGTTGTAGCTTTGGATCCTAA
TTTTAGAAAGTTGTCAATCGATGCCATTGTTTCTGCCTATCTAAGGTCCA
AAAGTAGGGCTATTCTGTTTGATTATGATGGAACTGTCATGCCCCAAACG
TCTATCAACAAGGCTCCAAGTCAAGCAGTGATCTCAATCATTAATACTCT
TTGTAATGATGCCAGGAATACTGTATTTGTCGTTAGTGGAAGAGGAAGGG
ATTGTTTAGGCAAGTGGTTCTCTCCATGCAAGAAACTTGGAATTGCTGCT
GAACATGGTTACTTCATGAGGTGGTCTGCTGATGAGGAGTGGCAAAACTG
TGGGCAGAGTGTTGATTTTGGGTGGATACAAATAGCTGAGCCTGTTATGA
AACTATATACAGAGTCCACTGATGGTTCTTACATTGAAATCAAAGAAAGT
GCCTTGGTCTGGCACCATCGAGATGCAGACCCCCGTTTTGGATCTAGCCA
GGCCAAGGAGTTGTTGGATCATCTAGAAAGCGTGCTAGCTAATGAACCTG
CTGCTGTAAAAAGTGGTCAGTTCATTGGTAAAAGTAAAGGCACAGGGTGG
TCGCAAGGGTGTGGTGGCAGAAAAAATCTTCACAACAATGGCCGACAATG
GGGAGGCATGCCGATTTTGTACCTCTGCATTGGGTGATGACAGATCTAAT
GAGGACTTGTTTGAGAATATTGGCAATGCGACCCCAGTTGGAGTCCCTCA
TCTAATGCATCTGTTTTTGCTGGCACCGGTTGGACAAACCCCAAACCAGC
CCTATTACCATTTGGGTGAACGCACCTGAGGTTGTAACCTTCGTTAGAAC
CGCGGCTGAACCTCCGGTCCCACCT
back to top