CV884255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884255 vs. ExPASy Swiss-Prot
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.128e-33 Identity = 88/215 (40.93%), Postives = 126/215 (58.60%), Query Frame = -2 Query: 308 KTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLISRKLTHHITTVLFFGFGLWSLWDAFS---DGGXXXXXXXXE--KKLDADFKANA-----GATKEGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVVGGKSLASQISEKIVALSGGVLFIVFGIQS-FLSP 919 KTFF AAI+AMR+ R VL+G + AL +MT LS + G+ A +I R T++++TVLF FG+ L + D G KK D +F+ G + G+ KK L F SPIF++A ++TF EWGD+SQL TI LAA E+P+GV +GG +G LCT AV+GG+ +A +IS + V + GG++F+ F + F+SP Sbjct: 112 KTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGY-ATTVIPRVYTYYVSTVLFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPGDVETGTSITVPQKKW-----LHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 320
BLAST of CV884255 vs. ExPASy Swiss-Prot
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 9.309e-33 Identity = 87/214 (40.65%), Postives = 125/214 (58.41%), Query Frame = -2 Query: 308 KTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLISRKLTHHITTVLFFGFGLWSLWDAFS---DGGXXXXXXXXE--KKLDADFKA----NAGATKEGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVVGGKSLASQISEKIVALSGGVLFIVFGIQS-FLSP 919 KTFF AAI+AMR+ R VL+G + AL +MT LS + G+ A +I R T++++T LF FG+ L + D G KK D +F+ N + G+ KK L F SPIF++A ++TF EWGD+SQL TI LAA E+P+GV +GG +G LCT AV+GG+ +A +IS + V + GG++F+ F + F+SP Sbjct: 112 KTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFGY-ATTVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPDVETGTSTAIPQKKW-----LHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 319
BLAST of CV884255 vs. ExPASy Swiss-Prot
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 9.309e-33 Identity = 87/214 (40.65%), Postives = 125/214 (58.41%), Query Frame = -2 Query: 308 KTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLISRKLTHHITTVLFFGFGLWSLWDAFS---DGGXXXXXXXXE--KKLDADFKA----NAGATKEGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVVGGKSLASQISEKIVALSGGVLFIVFGIQS-FLSP 919 KTFF AAI+AMR+ R VL+G + AL +MT LS + G+ A +I R T++++T LF FG+ L + D G KK D +F+ N + G+ KK L F SPIF++A ++TF EWGD+SQL TI LAA E+P+GV +GG +G LCT AV+GG+ +A +IS + V + GG++F+ F + F+SP Sbjct: 112 KTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFGY-ATTVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPDVETGTSTAIPQKKW-----LHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 319
BLAST of CV884255 vs. ExPASy Swiss-Prot
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.293e-31 Identity = 80/218 (36.70%), Postives = 116/218 (53.21%), Query Frame = -2 Query: 317 KTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLISRKLTHHITTVLFFGFGLWSLWDAFSDGGXXXXXXXXEKKLDADFKANA--------GA---------TKEGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVVGGKSLASQISEKIVALSGGVLFIVFGIQSF 919 KTF AA+LA + R V +G AL +MT+L ++G AP L RKLT + VLF FG+ L +A + + + AN GA ++ G +LK + R + FSP+F+KAF++TF EWGD+SQ+ATI +AA +N +GV +G +G A CT AV+ GK ++++I V GG+LFI FG+ F Sbjct: 65 KTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLGHAAPLLFPRKLTDILGGVLFVIFGIKMLMEAKEVMDSKESMSDEFQNVRNEIAANGPIDQLLEEGAAPSHYTGHRSRSGHTLMSQLKSKGRNVMATLFSPLFIKAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYISTKIKVHKVMFIGGILFIAFGLVYF 282
BLAST of CV884255 vs. ExPASy Swiss-Prot
Match: Y615_SYNY3 (UPF0016 membrane protein sll0615 OS=Synechocystis sp. (strain PCC 6803) GN=sll0615 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.376e-30 Identity = 81/205 (39.51%), Postives = 116/205 (56.59%), Query Frame = -2 Query: 305 KTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLISRKLTHHITTVLFFGFGLWSLWDAFSDGGXXXXXXXXEKKLDADFKANAGATKEGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVVGGKSLASQISEKIVALSGGVLFIVFGIQSFLSPV 919 KTFF A ILAMR+PRR VL G +G L MTILS ++G + L +R + ++ LF FG LWDA K A+ + A K + + +LK R + I +++F++TF EWGD++Q+ATI LAA N +GV G I+G +C AV+GGK +A +ISEK V L GG+LF +F + S+ + + Sbjct: 20 KTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTFLPTRYI-NYAEVALFLIFGTKLLWDA------------RRIKATANLEEMEDAEKAIASGEKKLKIVPRGW------GIVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVAGRISEKTVTLIGGLLFYLFAVVSWWTKI 205
BLAST of CV884255 vs. ExPASy Swiss-Prot
Match: YB37_YEAST (UPF0016 membrane protein YBR187W OS=Saccharomyces cerevisiae GN=YBR187W PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.048e-24 Identity = 71/213 (33.33%), Postives = 110/213 (51.64%), Query Frame = -2 Query: 326 KTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLISRKLTHHITTVLFFGFGLWSLWDAFS---DGGXXXXXXXXEKKL-------DADFKANAGATK-----EGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVVGGKSLASQISEKIVALSGGVLFIVFGI 919 KTF AA++AMRH R LV S +L +MTILS VVG A +S + T +LF FG + D G E+++ D D G T + + ++ + R FSP++++ F + F GE GD+SQ++ I +A D + + V+ G +IG A+C+ AVVGGK LA++IS + + L+ +LF +F + Sbjct: 57 KTFLIAALMAMRHKRVLVFSAAATSLAIMTILSGVVGHSAVAFLSERYTAFFAGILFLVFGYKLTMEGLEMSKDAGVEEEMAEVEEEIAIKDMNQDMDDVEKGGDTAYDKQLKNASIGKKIVHRIRELASFMFSPVWVQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIRTITLASSLLFFIFAL 269
BLAST of CV884255 vs. ExPASy Swiss-Prot
Match: YLY5_SCHPO (UPF0016 membrane protein C186.05c OS=Schizosaccharomyces pombe GN=SPAC186.05c PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.884e-17 Identity = 64/214 (29.91%), Postives = 99/214 (46.26%), Query Frame = -2 Query: 326 KTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLISRKLTHHITTVLFFGFGLWSLWDAFSDGGXXXXXXXXEKKL------DADFKANAGATKEGSKADDELKKQR----------RPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVVGGKSLASQISEKIVALSGGVLFIVFGI 919 K+F A+LA ++ R V G AL MT + +VG AP L + +TH + LF FG+ L ++ K+ + D K S K + + + FS F+KAF++ F E GD+SQ+ATI ++A E V +G IG LCT AV+ G+ ++++I V GG++F++FGI Sbjct: 42 KSFIVTALLAYQYGRASVFFGSYLALFFMTSFAVLVGRAAPFLFPKSITHILGGTLFLIFGVKMLKESKEVRESQQSLENEFDKVEKIIVNEEDMKKTLELGLPASNRSSSTLKDKFFKVFSMSCFKNLFSKKFSRAFIKAFALIFVSELGDRSQIATIVMSAKEKVLDVFIGVNIGHMLCTMVAVIVGRYISNKIEMYKVLFFGGIVFMIFGI 255 The following BLAST results are available for this feature:
BLAST of CV884255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884255 ID=CV884255; Name=CV884255; organism=Citrus sinensis; type=EST; length=920bpback to top |