CV884254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884254 vs. ExPASy Swiss-Prot
Match: FNTB_PEA (Protein farnesyltransferase subunit beta OS=Pisum sativum GN=FTB PE=2 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.018e-75 Identity = 142/234 (60.68%), Postives = 164/234 (70.09%), Query Frame = -2 Query: 134 GEPGSEAHGGYTFCGLAAMILINEADRLDLAALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQ--------RGAECSIDNTQTTTAXXXXXXXXXXXXXXXXXXEHCHF--QHREREPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFSR 805 GEPGSEAHGGYTFCGLAAMILI E +RLDL L+ WVVFRQG E GFQGRTNKLVDGCYSFWQGG ALL+R HSII E Q EC +D T + +F + R+ EPLFHSIALQ+Y+LLCSQ+ GGLRDK K RD+YH+CYCLSGLS+CQ+SW K DS PLP+ V+GPYSN+LEP+HP+FN+VLDRY EAHEFFS+ Sbjct: 186 GEPGSEAHGGYTFCGLAAMILIGEVNRLDLPRLLDWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLHSIIDEQMAEASQFVTVSDAPEEKEC-LDGTSSHATSHIRHEGMNESCSSDVKNIGYNFISEWRQSEPLFHSIALQQYILLCSQEQDGGLRDKPGKRRDHYHSCYCLSGLSLCQYSWSKRPDSPPLPKVVMGPYSNLLEPIHPLFNVVLDRYREAHEFFSQ 418
BLAST of CV884254 vs. ExPASy Swiss-Prot
Match: FNTB_ARATH (Protein farnesyltransferase subunit beta OS=Arabidopsis thaliana GN=FTB PE=1 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 2.202e-62 Identity = 122/233 (52.36%), Postives = 151/233 (64.81%), Query Frame = -2 Query: 131 GEPGSEAHGGYTFCGLAAMILINEADRLDLAALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF-----HSIIGESPTPVDQRGAECSIDNTQTTTAXXXXXXXXXXXXXXXXXXEHCH---FQHREREPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFSRS 805 GEPGSEAHGGYT+CGLAAMILINE DRL+L +L+ W V RQGVE GFQGRTNKLVDGCY+FWQ LL+R H + G S + D + H + +R + +F S+ LQRY+LLCS+ P GG RDK RKPRD+YHTCYCLSGLS+ QH+WLKDED+ PL R ++G YSN+LEPV + NIV+D+Y+EA EFF ++ Sbjct: 171 GEPGSEAHGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQAAPCVLLQRLYSTNDHDVHGSSHISEGTNEEHHAHDEDDLEDSDDDDDSDEDNDEDSVNGHRIHHTSTYINRRMQLVFDSLGLQRYVLLCSKIPDGGFRDKPRKPRDFYHTCYCLSGLSVAQHAWLKDEDTPPLTRDIMGGYSNLLEPVQLLHNIVMDQYNEAIEFFFKA 403
BLAST of CV884254 vs. ExPASy Swiss-Prot
Match: FNTB_HUMAN (Protein farnesyltransferase subunit beta OS=Homo sapiens GN=FNTB PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.176e-39 Identity = 95/223 (42.60%), Postives = 116/223 (52.02%), Query Frame = -2 Query: 140 GEPGSEAHGGYTFCGLAAMILINEADRLDLAALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQRGAECSIDNTQTTTAXXXXXXXXXXXXXXXXXXEHCHFQHREREPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 805 G PG EAHGGYTFCGLAA++++ L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R G+ + H+ +FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L VLG N L+P HPV+NI D+ +A +F Sbjct: 241 GVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMS-------------------------------------HW-------MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHF----GSGAMLHDVVLGVPENALQPTHPVYNIGPDKVIQATTYF 415
BLAST of CV884254 vs. ExPASy Swiss-Prot
Match: FNTB_RAT (Protein farnesyltransferase subunit beta OS=Rattus norvegicus GN=Fntb PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.536e-39 Identity = 95/223 (42.60%), Postives = 117/223 (52.47%), Query Frame = -2 Query: 140 GEPGSEAHGGYTFCGLAAMILINEADRLDLAALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQRGAECSIDNTQTTTAXXXXXXXXXXXXXXXXXXEHCHFQHREREPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 805 G PG EAHGGYTFCGLAA++++ + L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R G+ + H+ +FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L V+G NVL+P HPV+NI D+ +A F Sbjct: 241 GVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMS-------------------------------------HW-------MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHF----GSGAMLHDVVMGVPENVLQPTHPVYNIGPDKVIQATTHF 415
BLAST of CV884254 vs. ExPASy Swiss-Prot
Match: FNTB_BOVIN (Protein farnesyltransferase subunit beta OS=Bos taurus GN=FNTB PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.421e-39 Identity = 94/223 (42.15%), Postives = 115/223 (51.57%), Query Frame = -2 Query: 140 GEPGSEAHGGYTFCGLAAMILINEADRLDLAALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQRGAECSIDNTQTTTAXXXXXXXXXXXXXXXXXXEHCHFQHREREPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 805 G PG EAHGGYTFCGLAA++++ + L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R G+ + + +FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L VLG N L+P HPV+NI D+ +A F Sbjct: 241 GVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSRW--------------------------------------------MFHQQALQEYILMCCQCPTGGLLDKPGKSRDFYHTCYCLSGLSIAQHF----GSGAMLHDVVLGVPENALQPTHPVYNIGPDKVIQATMHF 415
BLAST of CV884254 vs. ExPASy Swiss-Prot
Match: FNTB_MOUSE (Protein farnesyltransferase subunit beta OS=Mus musculus GN=Fntb PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.835e-39 Identity = 94/223 (42.15%), Postives = 117/223 (52.47%), Query Frame = -2 Query: 140 GEPGSEAHGGYTFCGLAAMILINEADRLDLAALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQRGAECSIDNTQTTTAXXXXXXXXXXXXXXXXXXEHCHFQHREREPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 805 G PG EAHGGYTFCGLAA++++ + L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R G+ + H+ +FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L V+G NVL+P HPV+NI ++ +A F Sbjct: 241 GVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMS-------------------------------------HW-------MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHF----GSGAMLHDMVMGVPENVLQPTHPVYNIGPEKVIQATTHF 415
BLAST of CV884254 vs. ExPASy Swiss-Prot
Match: FNTB_DICDI (Protein farnesyltransferase subunit beta OS=Dictyostelium discoideum GN=fntB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.180e-25 Identity = 67/210 (31.90%), Postives = 102/210 (48.57%), Query Frame = -2 Query: 179 PGSEAHGGYTFCGLAAMILINEADRLDLAALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQRGAECSIDNTQTTTAXXXXXXXXXXXXXXXXXXEHCHFQHREREPLFHSIALQRYLL-LCSQDPR--GGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLGPYSNVLEPVHPVFN 799 P +EAHGGYTFC +AA+ ++N ++D+ +L W+ +RQ +GGF+GRTNKLVD CYS+WQG V+ +++ + + + D G E +E LF+ LQ Y++ C Q + G D + +DYYHTCY LSG+S+ Q++ + S L ++N E P N Sbjct: 241 PFNEAHGGYTFCSVAALSILNSLHKIDMNSLHRWITYRQSNDGGFEGRTNKLVDTCYSYWQGAVYIIIQSYFNYYKKQQQD-DGDGKE---------------------------------GDQQEEGLLFNQAKLQEYVIRFCQQSDKKYSGFSDHPHRGKDYYHTCYGLSGISLSQYNEIGKAIQS------LNTFTNTFEQPSPPIN 410
BLAST of CV884254 vs. ExPASy Swiss-Prot
Match: FNTB_SCHPO (Protein farnesyltransferase subunit beta OS=Schizosaccharomyces pombe GN=cpp1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20 Identity = 71/211 (33.65%), Postives = 91/211 (43.13%), Query Frame = -2 Query: 182 GEPGSEAHGGYTFCGLAAMILINEADRLDLAALIGWVVFRQG-VEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQRGAECSIDNTQTTTAXXXXXXXXXXXXXXXXXXEHCHFQHREREPLFHS-IALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSW-LKDEDSSPLPRAVLGPYSNVLEPVHPVF 805 G P +EAHGGYTFC LAA+ L+ D L+ L W+V RQ GF GR+NKLVDGCYS+W G H I+ + H+ LF++ L Y+L C Q GGLRDK K D YHTCYCL GLS + + D ++L + L P HP++ Sbjct: 197 GVPYAEAHGGYTFCALAAIALLGGLDNLNEIKLSTWLVQRQDPALYGFSGRSNKLVDGCYSWWVGA-------SHVIVASG----------------------------------------YGSASHKSLPNLFYNPEKLLGYILQCCQSTSGGLRDKPPKRPDQYHTCYCLLGLSSIAYDYRYHTSDGWSYKPSILHSSLSSLLPAHPIY 360
BLAST of CV884254 vs. ExPASy Swiss-Prot
Match: FNTB_YEAST (Protein farnesyltransferase subunit beta OS=Saccharomyces cerevisiae GN=RAM1 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 6.067e-20 Identity = 68/224 (30.36%), Postives = 100/224 (44.64%), Query Frame = -2 Query: 140 EAHGGYTFCGLAAMILINEADRLDLAALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQRGAECSIDNTQTTTAXXXXXXXXXXXXXXXXXXEHCHFQHREREPLFHSIALQRYLLLCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSP-----LPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 790 EAHGGYTFC A++ ++ D++++ L+ W RQ E GF GR+NKLVDGCYSFW GG A+L F C +H R+ Y+L C Q+ + GLRDK D+YHT YCL GL++ + S+ + SP P ++G S+ L V+PV+ + ++ + +F Sbjct: 256 EAHGGYTFCATASLAILRSMDQINVEKLLEWSSARQLQEERGFCGRSNKLVDGCYSFWVGGSAAILEAF--------------------------------------------GYGQCFNKHALRD----------YILYCCQEKEQPGLRDKPGAHSDFYHTNYCLLGLAVAESSYSCTPNDSPHNIKCTPDRLIG--SSKLTDVNPVYGLPIENVRKIIHYF 423 The following BLAST results are available for this feature:
BLAST of CV884254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884254 ID=CV884254; Name=CV884254; organism=Citrus sinensis; type=EST; length=845bpback to top |