CV884248

Overview
NameCV884248
Unique NameCV884248
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10290 contig Csv1_Contig10290:301..1133. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CV884248 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 58.9214 bits (141), Expect = 3.574e-11
Identity = 45/149 (30.20%), Postives = 75/149 (50.34%), Query Frame = 2 
Query:   14 MKTSLVTTLSFL----ILALATKPQLGASES--EPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGK-NGQ--CPTDVIQLSPKDKRGKNLGLLPYD-NSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIG 430
            MK   + +LSF     +LA A  P L A++S   P+LD+ G ++ +   YY+V  L     GGG++      NG   CP  V+Q   +    + L   P +    +VR ST++ + FS     +  +  ++W++D  + S G+ F+TIG
Sbjct:    1 MKELTMLSLSFFFVSALLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRD--HGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSS-TVWRLDKYDESTGQYFVTIG 146

HSP 2 Score: 30.0314 bits (66), Expect = 3.574e-11
Identity = 22/63 (34.92%), Postives = 31/63 (49.21%), Query Frame = 3 
Query:  444 VKIFFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGV-SNVDGVQRLVVVD 629
            +  +FK+E+   S F           YK+V C T V GSC   C DVG+  +  G +RL + D
Sbjct:  157 ISSWFKIEEFCGSGF-----------YKLVFCPT-VCGSCKVKCGDVGIYIDQKGRRRLALSD 207
The following BLAST results are available for this feature:
BLAST of CV884248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MIRA_RICDU3.574e-1130.20Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002C01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884248 ID=CV884248; Name=CV884248; organism=Citrus sinensis; type=EST; length=834bp
AAAAAAAAAACAAATGAAGACTTCATTAGTAACAACACTCTCCTTCCTTA
TACTTGCTTTGGCCACAAAACCTCAGTTGGGCGCCTCAGAATCTGAACCT
ATCTTAGATGTCTATGGCAACCAGGTGGACTCCAGCCACAGGTATTATCT
TGTCTCAGCACTCTGGGGAGTTAAAACCGGCGGTGGAATTAGCGCGGACA
AAGGCAAAAATGGACAGTGTCCAACGGATGTTATCCAATTAAGTCCTAAG
GACAAAAGGGGAAAGAATTTAGGTTTACTTCCGTATGACAATTCCACAAT
TGTCCGGGAATCCACTAATATTAAATTGAAATTCTCAAGAGTTTCTTCTC
TTCAGCAGTGTAACAAAGATTCGTTGTGGAAAGTTGACAACGATAACGCT
TCATTAGGAAAGCAGTTTATAACAATCGGTGAAGGTAAAACGTGTCAAAA
TTTTTTTTAAACTTGAGAAAGTTAGTGCATCAATATTTGATATGAAAATA
GCACTAGACATTCCCTGTCTATACAAAATTGTTCATTGTTCAACACTTGT
TAATGGTTCTTGCGATACACTCTGCAAAGACGTTGGCGTTTCTAATGTGG
ATGGCGTCCAACGTCTAGTTGTGGTTGATGATAATGATCAGCCAAATCTG
CCTTTGCCTGTTGTGTTATTTCCAGCTGATAGTGGAAGATCTATGTTATT
TCCGTCTCTGTAATGAATAAGCCAACAGGCTGTATTATTCTAAATAATGG
ACCAGGCTAGTACTCTTTAATCTCTATGGTTAAGCATAAATAAAATAGCC
TATGATGCTTTCGCTGTTAAAAAAAAAAAAAAAA
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