CV884242

Overview
NameCV884242
Unique NameCV884242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig446 contig Csv1_Contig446:14..781. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884242 vs. ExPASy Swiss-Prot
Match: JMT_BRARP (Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.458e-64
Identity = 130/264 (49.24%), Postives = 167/264 (63.26%), Query Frame = 3
Query:   30 MEVVHVLHMNGGVGNASYASNSLVQKKVISIAKPITEEAMTKLFCSTFPT-KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ------LGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP-------DGLE-----SNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSQELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNM 764
            MEV+ +LHMN G G  SYA NS+VQ  +IS+ + + +EA+ KL           IADLGCSSGPN+LL  S +++ +  +C  L   +PE  + LNDLP NDFN IF SL  F   ++K+      LG   G+ G CF + VPGSFYGRLFPR S+H  HSS SL WLSQVP       DG+       N+G I+++ TSP      Y  QFQ DFS+FL+ RS+ELV  GRMVL+FLGR S DP+++E CY WELLA AL ++
Sbjct:    1 MEVMRILHMNKGNGETSYAKNSIVQSNIISLGRRVMDEALKKLMIRNSEILSFGIADLGCSSGPNSLLSISNIVETIQNLCHDLDRPVPELSLSLNDLPSNDFNYIFASLPEFYDRVKKRDNNYESLGFEHGSGGPCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCGEVNKKDGVVITADLDNRGKIYLSKTSPKSAHKVYALQFQTDFSVFLRSRSEELVPGGRMVLSFLGRSSPDPTTEESCYQWELLAQALMSL 264          
BLAST of CV884242 vs. ExPASy Swiss-Prot
Match: JMT_ARATH (Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 5.522e-62
Identity = 130/261 (49.81%), Postives = 164/261 (62.84%), Query Frame = 3
Query:   30 MEVVHVLHMNGGVGNASYASNSLVQKKVISIAKPITEEAMTKLFCSTFP-TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKIL---RKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP------------DGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSQELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNM 764
            MEV+ VLHMN G G  SYA NS  Q  +IS+ + + +EA+ KL  S    + + IADLGCSSGPN+LL  S ++  ++ +C  L   +PE +V LNDLP NDFN I  SL  F   +   ++ LG   G    CF + VPGSFYGRLFPR S+H  HSS SL WLSQVP              LE N G I+++ TSP     AY  QFQ DF +FL+ RS+ELV  GRMVL+FLGR+S DP+++E CY WELLA AL +M
Sbjct:    1 MEVMRVLHMNKGNGETSYAKNSTAQSNIISLGRRVMDEALKKLMMSNSEISSIGIADLGCSSGPNSLLSISNIVDTIHNLCPDLDRPVPELRVSLNDLPSNDFNYICASLPEFYDRVNNNKEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCREAEKEDRTITADLE-NMGKIYISKTSPKSAHKAYALQFQTDFLVFLRSRSEELVPGGRMVLSFLGRRSLDPTTEESCYQWELLAQALMSM 260          
BLAST of CV884242 vs. ExPASy Swiss-Prot
Match: BAMT_ANTMA (Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.610e-53
Identity = 119/246 (48.37%), Postives = 159/246 (64.63%), Query Frame = 3
Query:   45 VLHMN-GGVGNASYASNSLVQKKVISIAKPITEEAMTKLFCST--FPTKVAIADLGCSSGPNTLLVASELIKVVNKI-CDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLE-SNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSQELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMV 767
            +L MN  G G  SYA+NS +QK ++S +  + +E +  +      FP    + D+GCSSGPN LLV S +I  +  +  +K  ++LPEF+VFLNDLP NDFN +F+ L              S   G CF  G+PGSFYGRL P+ S+H  +SSYS+ WLSQVP+GLE +N+ NI+MA+ SPP V  AY +Q++RDFS FLK R +E+V  GRMVLTF GR  +DPSSK+   I+ LLA  L +MV
Sbjct:    7 LLCMNIAGDGETSYANNSGLQKVMMSKSLHVLDETLKDIIGDHVGFPKCFKMMDMGCSSGPNALLVMSGIINTIEDLYTEKNINELPEFEVFLNDLPDNDFNNLFKLL--------------SHENGNCFVYGLPGSFYGRLLPKKSLHFAYSSYSIHWLSQVPEGLEDNNRQNIYMATESPPEVYKAYAKQYERDFSTFLKLRGEEIVPGGRMVLTFNGRSVEDPSSKDDLAIFTLLAKTLVDMV 238          
BLAST of CV884242 vs. ExPASy Swiss-Prot
Match: MT797_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana GN=At5g37970 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.118e-29
Identity = 86/225 (38.22%), Postives = 116/225 (51.56%), Query Frame = 3
Query:   54 MNGGVGNASYASNSLVQKKVISIAKPITEEAMTKLFCSTFPTK------VAIADLGCSSGPNTLLVASELIKVVNKICDK-----LGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG-----NIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSQELVAEGRMVLT 680
            MNGG G  SY  NS  QK  I   K  T EA+ +     F  +      + I D GCS GPNT  V   +I  V +   K     +G+ L EFQV  ND P NDFNT+FR+   F +              + F  GVPGSF+GR+ P+NS+H+ H+SY+L WLS VP  +   K      +    +     V  AY  QF++DF  FL+ R++ELV+ G M+L+
Sbjct:   10 MNGGDGPHSYIHNSSYQKVAIDGVKERTSEAILEKLDLEFLNRNSEENILRIVDFGCSIGPNTFDVVQNIIDTVKQKRLKENKTYIGAPL-EFQVCFNDQPNNDFNTLFRTQPFFSR-------------KEYFSVGVPGSFHGRVLPKNSLHIGHTSYTLHWLSNVPQHVCDKKSPALNKSYIQCNNLVDEVTKAYKIQFRKDFGGFLEARAEELVSGGLMILS 220          
BLAST of CV884242 vs. ExPASy Swiss-Prot
Match: MT810_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana GN=At5g38100 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.718e-29
Identity = 87/225 (38.67%), Postives = 112/225 (49.78%), Query Frame = 3
Query:   42 HVLHMNGGVGNASYASNSLVQKKVISIAKPITE----EAMTKLFCSTFPTKVAIADLGCSSGPNTLLVASELIKVVN--KICDKLGSQLP--EFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG-----NIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSQELVAEGRMVL 677
            H+  M+ G    SY  NS  QK  IS A   T     E +     S F T   IAD GCS GPNT  VA  +I  V   ++ +   + L   EFQVF ND P NDFNT+FR+                    + F  GVPGSFYGR+ PRNS+H+ H+SY+  WLS+VPD +   K      N    +     V  AY  QF +D  +FL  R++ELV  G M++
Sbjct:    6 HMYPMSSGHDQHSYIHNSSYQKAAISSAVEKTRRCIFEKLDLQLSSDFGT-FRIADFGCSIGPNTFHVAQSIIDTVKSKRLEESTENSLVPLEFQVFFNDQPTNDFNTLFRT-------------QPLSPEREYFSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQCNNLLEEVTKAYKVQFIKDMEIFLDARAEELVPGGLMIV 216          
BLAST of CV884242 vs. ExPASy Swiss-Prot
Match: MT799_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 5.216e-28
Identity = 89/225 (39.56%), Postives = 117/225 (52.00%), Query Frame = 3
Query:   54 MNGGVGNASYASNSLVQKKVISIAKPITEEAMTK------LFCSTFPTKVAIADLGCSSGPNTLLVASELIKVVNKICDK-----LGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG-----NIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSQELVAEGRMVLT 680
            MNGG G  SY  NS  QK  I  AK  T EA+ K      L  ++    + IAD GCS GPNT  V   +I  V +   K     +G+ L EFQV  ND P NDFNT+FR+    Q I  KQ   +          GVPGSF+GR+ P+NS+H+ H +Y+L WLS VP  +   K      +    +     V  AY  QF++D   FL  R++ELV+ G M+L+
Sbjct:   10 MNGGDGPHSYIHNSSYQKVAIDGAKEKTSEAILKNLDLELLNRNSDENILRIADFGCSIGPNTFEVVQNIIDTVKQKNLKENNAYIGAPL-EFQVCFNDQPNNDFNTLFRT----QPISSKQAYLS---------VGVPGSFHGRVLPKNSLHIGHITYALHWLSTVPQHVCDKKSPALNKSYIQCNNLVEEVTEAYRVQFKKDMGDFLGARAEELVSGGLMILS 220          
BLAST of CV884242 vs. ExPASy Swiss-Prot
Match: MT878_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana GN=At5g38780 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.862e-26
Identity = 83/222 (37.39%), Postives = 111/222 (50.00%), Query Frame = 3
Query:   54 MNGGVGNASYASNSLVQKKVIS----IAKPITEEAMTKLFCSTFPTKVAIADLGCSSGPNTLLVASELIKVVN----KICDKLGSQLP-EFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPD------GLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSQELVAEGRMV 674
            M+GG    SY  NS  QK  I      A+    E +  L  +   +   IAD GCS GPNT      +I +V     K   +     P EFQV+ NDLP NDFNT+FR+     K              + F  GVPGSFYGR+ PRNS+H+ ++S++  WLS+VP+       L  NK N    +     V  AY  QF++D  +FLK R++ELV  G M+
Sbjct:   10 MSGGDDQHSYIHNSSYQKAGIDGVQEKARQYILENLDLLNMNPNLSTFTIADFGCSIGPNTFHAVQNIIDIVKLKHLKESQEDSRVAPLEFQVYFNDLPNNDFNTLFRTQPPSSK-------------QEYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNK-NYIHCNNLIEEVTEAYKVQFEKDMGVFLKARAEELVPGGLMI 217          
The following BLAST results are available for this feature:
BLAST of CV884242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
JMT_BRARP3.458e-6449.24Jasmonate O-methyltransferase OS=Brassica rapa sub... [more]
JMT_ARATH5.522e-6249.81Jasmonate O-methyltransferase OS=Arabidopsis thali... [more]
BAMT_ANTMA1.610e-5348.37Benzoate carboxyl methyltransferase OS=Antirrhinum... [more]
MT797_ARATH2.118e-2938.22Probable S-adenosylmethionine-dependent methyltran... [more]
MT810_ARATH4.718e-2938.67Probable S-adenosylmethionine-dependent methyltran... [more]
MT799_ARATH5.216e-2839.56Probable S-adenosylmethionine-dependent methyltran... [more]
MT878_ARATH2.862e-2637.39Probable S-adenosylmethionine-dependent methyltran... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002B09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884242 ID=CV884242; Name=CV884242; organism=Citrus sinensis; type=EST; length=768bp
GACGTAGAACAAAGAATACTGTGCGAGAGATGGAGGTGGTTCACGTGCTT
CACATGAATGGAGGAGTAGGAAACGCAAGTTATGCCAGTAATTCACTGGT
TCAGAAAAAAGTCATATCCATTGCAAAGCCAATCACAGAGGAAGCCATGA
CCAAACTCTTCTGCAGCACGTTCCCAACAAAGGTAGCAATTGCCGACTTG
GGCTGTTCTTCAGGACCAAACACTTTGCTTGTGGCATCTGAACTTATCAA
AGTAGTGAACAAGATCTGCGATAAGTTGGGCAGTCAATTACCAGAATTTC
AAGTGTTCCTGAACGATCTTCCGGGGAATGACTTTAACACCATATTCAGG
TCTTTAGCAAGCTTCCAAAAGATACTGAGAAAGCAATTAGGGTCGGCCTC
TGGGGCAGCTGGGCAGTGCTTCTTCACTGGGGTCCCTGGTTCTTTCTATG
GCAGGCTTTTCCCTCGCAATAGTGTGCATCTTTTCCACTCTTCTTATAGT
CTCCAATGGCTATCTCAAGTTCCAGATGGACTGGAGAGCAATAAAGGGAA
CATTTTCATGGCCAGTACAAGTCCGCCATGCGTGCTTACGGCATATTACG
AGCAATTTCAAAGAGATTTTTCATTGTTTCTCAAGTGTCGCTCACAGGAA
TTGGTGGCAGAAGGGCGCATGGTTTTAACATTTCTAGGAAGAAAAAGCCA
AGATCCCTCAAGCAAAGAGTGCTGCTACATTTGGGAGCTCTTGGCCACGG
CTCTCAACAATATGGTCT
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