EY665243

Overview
NameEY665243
Unique NameEY665243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 3.764e-83
Identity = 155/192 (80.73%), Postives = 163/192 (84.90%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALSPC*FQVSXXXXXXXXXXXGGFTQF-RPGWIFRRWNTEKR 600
            MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM KYAGKDAFHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAF KPQGTCARV+IGQVLLSVRCKD NSHHAQEAL    F+              GFT+F R  +I  +W ++ R
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKW-GFTKFNRTDYI--KWKSQNR 189          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 1.211e-81
Identity = 145/152 (95.39%), Postives = 148/152 (97.37%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K+AGKDAFHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAF KPQG CARVAIGQVLLSVRCKD+NSH+AQEAL
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDNNSHNAQEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.339e-80
Identity = 144/152 (94.74%), Postives = 146/152 (96.05%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAF KPQG CARVAIGQVLLSVRCKD NS+HAQEAL
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNSNHAQEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL101_ORYSJ (60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica GN=SC34 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 3.297e-79
Identity = 141/152 (92.76%), Postives = 146/152 (96.05%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAF KPQGTCARV IGQVLLSVRCK+SN+ HA+EAL
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL101_ORYSI (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica GN=SC34 PE=2 SV=2)

HSP 1 Score: 295.434 bits (755), Expect = 3.297e-79
Identity = 141/152 (92.76%), Postives = 146/152 (96.05%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAF KPQGTCARV IGQVLLSVRCK+SN+ HA+EAL
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL101_ARATH (60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 2.137e-78
Identity = 149/194 (76.80%), Postives = 157/194 (80.93%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALSPC*FQVSXXXXXXXXXXXGGFTQFRPGWIFRRWNTEKRNGP 609
            MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVL INKMLSCAGADRLQTGMRGAF K  GTCARVAIGQVLLSVRCKD++ HHAQEAL    F+              GFT+F     F +   EKR  P
Sbjct:    1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKW-GFTKFNRA-DFTKLRQEKRVVP 192          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 8.121e-78
Identity = 138/152 (90.79%), Postives = 144/152 (94.74%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVL INKMLSCAGADRLQTGMRGAF K  GTCARVAIGQVLLSVRCKD++ HHAQEAL
Sbjct:    1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL103_ARATH (60S ribosomal protein L10-3 OS=Arabidopsis thaliana GN=RPL10C PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.327e-77
Identity = 138/152 (90.79%), Postives = 143/152 (94.08%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVL INKMLSCAGADRLQTGMRGAF K  GTCARVAIGQVLLSVRCKD++  HAQEAL
Sbjct:    1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDNHGVHAQEAL 152          

HSP 2 Score: 23.0978 bits (48), Expect = 4.327e-77
Identity = 13/31 (41.94%), Postives = 17/31 (54.84%), Query Frame = 3
Query:  504 FPGRQKIIGPQERGIYPVPPWLDFQKVEYGK 596
            FPGRQKII  ++ G      +  F + EY K
Sbjct:  159 FPGRQKIIVSRKWG------FTKFNRAEYTK 183          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_MAIZE (60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 8.979e-77
Identity = 137/152 (90.13%), Postives = 143/152 (94.08%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYRQIKNKP PKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWE+ENVSSEALEAARI CNKYM K AGKDAFHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAF KPQGTCARV IGQVLLSVRCKD+N+ HA EAL
Sbjct:    1 MGRRPARCYRQIKNKPCPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWERENVSSEALEAARIVCNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNAAHASEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_PINTA (60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 2.000e-76
Identity = 144/194 (74.23%), Postives = 157/194 (80.93%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALSPC*FQVSXXXXXXXXXXXGGFTQFRPGWIFRRWNTEKRNGP 609
            MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRI+DVG KK+ VDEFPFCVHLVSWEKENVSSEALEA RIACNKYM K+AGKD FHLRVRVHPFHVL  NKMLSCAGADRLQTGMRGAF KPQGTCARVAIGQVLLSVR +D++S+HAQEAL    F+              GFT++     + +W TE R  P
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGAKKRLVDEFPFCVHLVSWEKENVSSEALEAGRIACNKYMVKFAGKDGFHLRVRVHPFHVLRSNKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRSRDNHSNHAQEALRRAKFKFPGREKIIVNRKW-GFTKYTRA-DYLKWKTENRIVP 192          
The following BLAST results are available for this feature:
BLAST of EY665243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RL10_VITRI3.764e-8380.7360S ribosomal protein L10 OS=Vitis riparia GN=RPL1... [more]
RL10_EUPES1.211e-8195.3960S ribosomal protein L10 OS=Euphorbia esula GN=RP... [more]
RL10_SOLME1.339e-8094.7460S ribosomal protein L10 OS=Solanum melongena GN=... [more]
RL101_ORYSJ3.297e-7992.7660S ribosomal protein L10-1 OS=Oryza sativa subsp.... [more]
RL101_ORYSI3.297e-7992.7660S ribosomal protein L10-1 OS=Oryza sativa subsp.... [more]
RL101_ARATH2.137e-7876.8060S ribosomal protein L10-1 OS=Arabidopsis thalian... [more]
RL102_ARATH8.121e-7890.7960S ribosomal protein L10-2 OS=Arabidopsis thalian... [more]
RL103_ARATH4.327e-7790.7960S ribosomal protein L10-3 OS=Arabidopsis thalian... [more]
RL10_MAIZE8.979e-7790.1360S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=... [more]
RL10_PINTA2.000e-7674.2360S ribosomal protein L10 OS=Pinus taeda GN=RPL10 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665243 ID=EY665243; Name=EY665243; organism=Citrus sinensis; type=EST; length=984bp
AGCTGAGACCGAACACGAACGCTCGCCATGGGAAGAAGACCGGCAAGGTG
TTACCGCCAAATCAAGAACAAACCCTACCCAAAGTCCCGCTTTTGCCGCG
GTGTCCCCGATCCCAAGATCAGAATCTACGATGTCGGGATGAAGAAGAAA
GGCGTCGACGAGTTCCCCTTCTGCGTTCACCTCGTCAGTTGGGAGAAGGA
GAACGTGTCGAGCGAGGCCTTGGAAGCTGCCCGTATCGCTTGCAACAAGT
ACATGGCCAAGTACGCTGGCAAGGATGCTTTCCATTTGCGAGTGAGGGTG
CACCCCTTCCATGTTCTGCTCATTAACAAGATGCTTTCGTGTGCTGGGGC
TGATCGGCTCCAGACTGGAATGAGGGGTGCTTTTTGAAAGCCCCAAGGAA
CCTGTGCTCGTGTTGCTATCGGGCAGGTCTTGCTTTCTGTCCGTTGCAAG
GACAGTAACAGCCACCATGCTCAGGAGGCCCTTTCGCCGTGCTAATTTCA
GGTTTCCCTGGTCGTCAAAAAATTATTGGTCCGCAGGAAAGGGGGATTTA
CCCAGTTCCGCCCTGGCTGGATTTTCAGAAGGTGGAATACGGAAAAACGG
AATGGTCCCAAATGGGGGGGAAGGCCACGTTTTCTCGGAGGTCTGGGGCC
TTTGGGGCTACAGCCCACACTAGAAAAAATTTTCCGGGAAAACAAAAACC
AAGAAAATTAAAAGGACCCAAAAAAAGCAAGAAAATGGACAATCTGGTAA
GAGTTTAAAGTTTCCCCCTTCACAGAACTTATCCCTCCGTGAACAGGGAA
ATCTCACATAGTTAAGACAGAAACGGAATCATTTAGGGGTTTTAAAAAAC
AATAAAAACCATGTAAGAATAAAATTATAATAAAAAAAATAATAGGAATC
CACGAACACATAGAACATAGAAGTGGATCTTGTGGTGAATGGTATTTTAT
TTTAGTATTAAAGAAAAAAATAAAGAACTATGAA
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