DY257693

Overview
NameDY257693
Unique NameDY257693
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length358
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13657 contig Csv1_Contig13657:760..1117. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.982e-19
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIP 158
            KLSAEKAIFIFVDNVLPP GA+MS++YEEKKD+DGFLYVTYSGENTFG   P
Sbjct:   70 KLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGFGSP 121          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.589e-19
Identity = 42/49 (85.71%), Postives = 48/49 (97.96%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 149
            KLSAEKAIFIFVDNVLPPTG +MS++YE+KKDEDGFLY+TYSGENTFG+
Sbjct:   71 KLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGA 119          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.838e-19
Identity = 43/49 (87.76%), Postives = 47/49 (95.92%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 149
            +LSAEKAIFIFVDNVLPPTGA+MS IY+E K+EDGFLYVTYSGENTFGS
Sbjct:   70 QLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGS 118          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8_PHANO (Autophagy-related protein 8 OS=Phaeosphaeria nodorum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.328e-18
Identity = 42/51 (82.35%), Postives = 45/51 (88.24%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHI 155
            KLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG  I
Sbjct:   69 KLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGEAI 119          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.328e-18
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 146
            KLSAEKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:   70 KLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.328e-18
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 146
            KLSAEKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:   70 KLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8_YARLI (Autophagy-related protein 8 OS=Yarrowia lipolytica GN=ATG8 PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.088e-17
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 146
            KLS+E+AIFIFVD+VLPPT A+MS+IYEE KDEDGFLYVTYSGENTFG
Sbjct:   69 KLSSERAIFIFVDDVLPPTAALMSSIYEEHKDEDGFLYVTYSGENTFG 116          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8_CHAGB (Autophagy-related protein 8 OS=Chaetomium globosum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.088e-17
Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 149
            KLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG+
Sbjct:   69 KLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGN 117          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8_PODAN (Autophagy-related protein 8 OS=Podospora anserina GN=ATG8 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.421e-17
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 146
            KLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:   69 KLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8_PENCW (Autophagy-related protein 8 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg8 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.421e-17
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 146
            KLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY+TYSGENTFG
Sbjct:   69 KLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of DY257693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
ATG8F_ARATH1.982e-1984.62Autophagy-related protein 8f OS=Arabidopsis thalia... [more]
ATG8E_ARATH2.589e-1985.71Autophagy-related protein 8e OS=Arabidopsis thalia... [more]
ATG8G_ARATH9.838e-1987.76Autophagy-related protein 8g OS=Arabidopsis thalia... [more]
ATG8_PHANO8.328e-1882.35Autophagy-related protein 8 OS=Phaeosphaeria nodor... [more]
ATG8C_ORYSJ8.328e-1887.50Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ORYSI8.328e-1887.50Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8_YARLI1.088e-1785.42Autophagy-related protein 8 OS=Yarrowia lipolytica... [more]
ATG8_CHAGB1.088e-1783.67Autophagy-related protein 8 OS=Chaetomium globosum... [more]
ATG8_PODAN1.421e-1785.42Autophagy-related protein 8 OS=Podospora anserina ... [more]
ATG8_PENCW1.421e-1785.42Autophagy-related protein 8 OS=Penicillium chrysog... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DF06FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257693 ID=DY257693; Name=DY257693; organism=Citrus sinensis; type=EST; length=358bp
TCAAACTGAGTGCTGAAAAGGCGATATTTATTTTTGTGGATAATGTGCTC
CCACCTACAGGTGCAATTATGTCTGCCATATACGAAGAGAAAAAGGATGA
AGATGGTTTTCTTTATGTGACTTACAGTGGGGAGAACACATTTGGAAGCC
ACATCCCAGTTTAGCCTTGTGATTATCTATCTGCTCATTGTGTGGTTTCT
TGTGCGACCACATTTTTATCTCAATTATCATCCTTGCTTTCCGCTGAATA
TTCCTTTATCGGGCATATTTTATATTTTATAAAGACATTGCCAGTGATAA
TATGTACAGTTACCTATTGTATATAAGTCTTAAAGGCATAATATGTCAAA
TTTCTTTC
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