EH406485

Overview
NameEH406485
Unique NameEH406485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EH406485 vs. ExPASy Swiss-Prot
Match: AAP3_ARATH (Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.263e-22
Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 2
Query:    2 VVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 223
            VVGLLGALGFWPLTVYFPVEMYIAQKKIP+WST+W+CLQ+ S+ CL                DLKSYKPF + Y
Sbjct:  403 VVGLLGALGFWPLTVYFPVEMYIAQKKIPRWSTRWVCLQVFSLGCLVVSIAAAAGSIAGVLLDLKSYKPFRSEY 476          
BLAST of EH406485 vs. ExPASy Swiss-Prot
Match: AAP5_ARATH (Amino acid permease 5 OS=Arabidopsis thaliana GN=AAP5 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.382e-21
Identity = 45/74 (60.81%), Postives = 52/74 (70.27%), Query Frame = 2
Query:    2 VVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 223
            VVGLLGA+GFWPLTVYFPVEMYIAQK +P+W TKW+CLQ+LSV CL                DLK YKPF + +
Sbjct:  407 VVGLLGAIGFWPLTVYFPVEMYIAQKNVPRWGTKWVCLQVLSVTCLFVSVAAAAGSVIGIVSDLKVYKPFQSEF 480          
BLAST of EH406485 vs. ExPASy Swiss-Prot
Match: AAP2_ARATH (Amino acid permease 2 OS=Arabidopsis thaliana GN=AAP2 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.382e-21
Identity = 46/74 (62.16%), Postives = 54/74 (72.97%), Query Frame = 2
Query:    2 VVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 223
            VVG+LGALGFWPLTVYFPVEMYI Q+K+ KWST+W+CLQ+LSVACL                DLK YKPF ++Y
Sbjct:  420 VVGILGALGFWPLTVYFPVEMYIKQRKVEKWSTRWVCLQMLSVACLVISVVAGVGSIAGVMLDLKVYKPFKSTY 493          
BLAST of EH406485 vs. ExPASy Swiss-Prot
Match: AAP4_ARATH (Amino acid permease 4 OS=Arabidopsis thaliana GN=AAP4 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 44/74 (59.46%), Postives = 51/74 (68.92%), Query Frame = 2
Query:    2 VVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 223
            VVG+LGALGFWPLTVYFPVEMYI Q+K+ +WS KW+CLQ+LS  CL                DLK YKPF T+Y
Sbjct:  393 VVGILGALGFWPLTVYFPVEMYIRQRKVERWSMKWVCLQMLSCGCLMITLVAGVGSIAGVMLDLKVYKPFKTTY 466          
BLAST of EH406485 vs. ExPASy Swiss-Prot
Match: AAP8_ARATH (Amino acid permease 8 OS=Arabidopsis thaliana GN=AAP8 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.073e-13
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 2
Query:    2 VVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPF 211
            ++GLLGA  FWPLTVYFPV M+IAQ K+ K+S +WL L +L + CL                 +KSYKPF
Sbjct:  402 ILGLLGAFAFWPLTVYFPVAMHIAQAKVKKYSRRWLALNLLVLVCLIVSALAAVGSIIGLINSVKSYKPF 471          
BLAST of EH406485 vs. ExPASy Swiss-Prot
Match: AAP1_ARATH (Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.073e-13
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 2
Query:    2 VVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 223
            ++GL+GA  FWPLTVYFPVEM+IAQ KI K+S +W+ L+ +   CL                 +K+YKPF T +
Sbjct:  411 ILGLIGAASFWPLTVYFPVEMHIAQTKIKKYSARWIALKTMCYVCLIVSLLAAAGSIAGLISSVKTYKPFRTMH 484          
BLAST of EH406485 vs. ExPASy Swiss-Prot
Match: AAP6_ARATH (Amino acid permease 6 OS=Arabidopsis thaliana GN=AAP6 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.948e-13
Identity = 35/69 (50.72%), Postives = 42/69 (60.87%), Query Frame = 2
Query:    5 VGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPF 211
            +GL+GA  FWPLTVYFP+EM+IAQKKIPK+S  W  L+ILS  C                  LK +KPF
Sbjct:  410 LGLIGAASFWPLTVYFPIEMHIAQKKIPKFSFTWTWLKILSWTCFIVSLVAAAGSVQGLIQSLKDFKPF 478          
The following BLAST results are available for this feature:
BLAST of EH406485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
AAP3_ARATH1.263e-2264.86Amino acid permease 3 OS=Arabidopsis thaliana GN=A... [more]
AAP5_ARATH2.382e-2160.81Amino acid permease 5 OS=Arabidopsis thaliana GN=A... [more]
AAP2_ARATH2.382e-2162.16Amino acid permease 2 OS=Arabidopsis thaliana GN=A... [more]
AAP4_ARATH4.493e-2059.46Amino acid permease 4 OS=Arabidopsis thaliana GN=A... [more]
AAP8_ARATH4.073e-1348.57Amino acid permease 8 OS=Arabidopsis thaliana GN=A... [more]
AAP1_ARATH4.073e-1344.59Amino acid permease 1 OS=Arabidopsis thaliana GN=A... [more]
AAP6_ARATH6.948e-1350.72Amino acid permease 6 OS=Arabidopsis thaliana GN=A... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2CC07FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406485 ID=EH406485; Name=EH406485; organism=Citrus sinensis; type=EST; length=614bp
CGTTGTTGGTCTCCTCGGAGCTCTAGGATTTTGGCCACTTACAGTATACT
TCCCTGTTGAGATGTATATTGCGCAAAAGAAGATACCAAAGTGGAGCACA
AAATGGCTTTGTCTCCAAATCCTAAGCGTAGCTTGCCTAATAATCACCAT
AGCTGCAGCGGCTGGCTCTATTGCAGGAGTTGTTACTGACCTTAAGTCTT
ATAAGCCCTTCAGCACCAGCTACTAATTCAGTCTGATTACAAATGGAAGT
AGCCATTGATGATGTTCGACAAGGAAAAGGATCAATCATTAGACTTTTCA
GTTCTTGTTTATGTTAATATGTCAAGTGCCTAAACTGGTCATGTTACTGC
TATTTTCATTAGCTCTCCGTTGTCTCTTTGCCCTTCTCATCACAAACAAA
AGCAGGACCATGTATCTGTGCATAGGAGTCCTCAAGATTTGAACAATGTA
ACGTTGTCCATTTTCCAAATGCAAAATAGAAAAATTTAAACCAAGTTGCT
GGCTTATATATCTTTTGTTTTTGCAATGTTATATTAACTAGTCATGATTA
CAACAAGCACTTAATAAAAGTATGGGCCACCGAGCAACAGGCAAATAATT
GGGAGGATATTGTT
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