FC871859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871859 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.673e-62 Identity = 117/122 (95.90%), Postives = 121/122 (99.18%), Query Frame = 2 Query: 2 YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 367 YKILLKEPNTKT+SQ+D FEFNSKFTDRMRRIKIPLPPVDERKK+VEDVDKDRRYAIDAA+VRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA Sbjct: 617 YKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPLPPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738
BLAST of FC871859 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23 Identity = 60/125 (48.00%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 5 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 367 ++L+K P K + D F FN +F ++ RIKI V+E+ E V +DR+Y IDAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY+ERDK+NPN + Y+A Sbjct: 637 RVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDNPNQYHYVA 759
BLAST of FC871859 vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 59/125 (47.20%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 5 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 367 ++L+K P K + D F FN+ F ++ RIKI V+E+ E V +DR+Y IDAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY+ERDK++PN + Y+A Sbjct: 637 RVLIKSPKGKEVEDGDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDSPNQYHYVA 759
BLAST of FC871859 vs. ExPASy Swiss-Prot
Match: CUL3_SCHPO (Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.716e-22 Identity = 54/128 (42.19%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 2 YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIP------LPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 367 YKILLK+P + ++ D F FN F + RIKI + ERK+ +E VD+ R++ DA +VR+MK RKV H QL++E QL+ F P IK+R+E LI R+YL+R +N ++ YLA Sbjct: 658 YKILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADNGRIYEYLA 785
BLAST of FC871859 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22 Identity = 60/125 (48.00%), Postives = 74/125 (59.20%), Query Frame = 2 Query: 5 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 367 ++L K P K I D F N F ++ RIKI V+E+ E V +DR+Y IDAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+ERDKENPN + Y+A Sbjct: 773 RVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQYNYIA 895
BLAST of FC871859 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21 Identity = 52/118 (44.07%), Postives = 81/118 (68.64%), Query Frame = 2 Query: 29 TKTISQSDHFEFNSKFTDRMRRIKIPL-----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 367 +K+I +SD F FN+KF ++ R+K+ PV+E K+ + VD+DR++ I+A++VRIMK+RK L H LVSE ++QL F P+ +KKR+E LI R+YLER K++ ++ Y+A Sbjct: 653 SKSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEE-KETRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQDRKIYNYMA 769
BLAST of FC871859 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 53/127 (41.73%), Postives = 75/127 (59.06%), Query Frame = 2 Query: 5 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 367 ++L KEP +K I F N +FT ++ R+KI ERK+ + VD DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL R E+ ++ Y+A Sbjct: 642 RVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of FC871859 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 53/127 (41.73%), Postives = 75/127 (59.06%), Query Frame = 2 Query: 5 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 367 ++L KEP +K I F N +FT ++ R+KI ERK+ + VD DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL R E+ ++ Y+A Sbjct: 642 RVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of FC871859 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 53/127 (41.73%), Postives = 75/127 (59.06%), Query Frame = 2 Query: 5 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 367 ++L KEP +K I F N +FT ++ R+KI ERK+ + VD DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL R E+ ++ Y+A Sbjct: 642 RVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of FC871859 vs. ExPASy Swiss-Prot
Match: CUL3_MOUSE (Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20 Identity = 53/127 (41.73%), Postives = 75/127 (59.06%), Query Frame = 2 Query: 5 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 367 ++L KEP +K I F N +FT ++ R+KI ERK+ + VD DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL R E+ ++ Y+A Sbjct: 642 RVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768 The following BLAST results are available for this feature:
BLAST of FC871859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871859 ID=FC871859; Name=FC871859; organism=Citrus sinensis; type=EST; length=708bpback to top |